RNA–Protein interactions for RNA: ENST00000509013.2

SSBP2-211, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-211ENST00000509013 TNS2Q63HR2 1409 aa8.62□□□□□ -1.03
SSBP2-211ENST00000509013 SBF2Q86WG5 1849 aa8.61□□□□□ -1.03
SSBP2-211ENST00000509013 IL2RBP14784 551 aa8.61□□□□□ -1.03
SSBP2-211ENST00000509013 LRRC4BQ9NT99 713 aa8.61□□□□□ -1.03
SSBP2-211ENST00000509013 COL18A1P39060 1754 aa8.61□□□□□ -1.03
SSBP2-211ENST00000509013 CLSPNQ9HAW4 1339 aa8.6□□□□□ -1.03
SSBP2-211ENST00000509013 PIK3C2AO00443 1686 aa8.6□□□□□ -1.03
SSBP2-211ENST00000509013 ZNF316A6NFI3 1004 aaPredicted RBP8.6□□□□□ -1.03
SSBP2-211ENST00000509013 LHX8Q68G74 356 aa8.6□□□□□ -1.03
SSBP2-211ENST00000509013 KIAA1210Q9ULL0 1709 aa8.6□□□□□ -1.03
SSBP2-211ENST00000509013 KTN1Q86UP2 1357 aaKnown RBP8.6□□□□□ -1.03
SSBP2-211ENST00000509013 ERBB3P21860 1342 aa8.59□□□□□ -1.03
SSBP2-211ENST00000509013 SLC27A3Q5K4L6 730 aa8.59□□□□□ -1.03
SSBP2-211ENST00000509013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.59□□□□□ -1.03
SSBP2-211ENST00000509013 TFCP2L1Q9NZI6 479 aa8.59□□□□□ -1.03
SSBP2-211ENST00000509013 TRPM1Q7Z4N2 1603 aa8.58□□□□□ -1.04
SSBP2-211ENST00000509013 GRIN3BO60391 1043 aa8.58□□□□□ -1.04
SSBP2-211ENST00000509013 DIEXFQ68CQ4 756 aaKnown RBP8.58□□□□□ -1.04
SSBP2-211ENST00000509013 NLGN2Q8NFZ4 835 aa8.58□□□□□ -1.04
SSBP2-211ENST00000509013 DDX54Q8TDD1 881 aaKnown RBP8.58□□□□□ -1.04
SSBP2-211ENST00000509013 ANKRD24Q8TF21 1146 aa8.58□□□□□ -1.04
SSBP2-211ENST00000509013 NFAT5O94916 1531 aa8.58□□□□□ -1.04
SSBP2-211ENST00000509013 AKAP12Q02952 1782 aa8.58□□□□□ -1.04
SSBP2-211ENST00000509013 PNPLA7Q6ZV29 1317 aa8.57□□□□□ -1.04
SSBP2-211ENST00000509013 NHSQ6T4R5 1651 aa8.57□□□□□ -1.04
SSBP2-211ENST00000509013 SYTL4Q96C24 671 aaPredicted RBP8.57□□□□□ -1.04
SSBP2-211ENST00000509013 ABCC6O95255 1503 aa8.57□□□□□ -1.04
SSBP2-211ENST00000509013 PAPPAQ13219 1627 aa8.57□□□□□ -1.04
SSBP2-211ENST00000509013 WNK3Q9BYP7 1800 aa8.57□□□□□ -1.04
SSBP2-211ENST00000509013 QRICH2Q9H0J4 1663 aa8.56□□□□□ -1.04
SSBP2-211ENST00000509013 PRR29P0C7W0 189 aa8.56□□□□□ -1.04
SSBP2-211ENST00000509013 KCNQ4P56696 695 aa8.56□□□□□ -1.04
SSBP2-211ENST00000509013 NME9Q86XW9 330 aa8.56□□□□□ -1.04
SSBP2-211ENST00000509013 L3MBTL2Q969R5 705 aa8.56□□□□□ -1.04
SSBP2-211ENST00000509013 CEP350Q5VT06 3117 aa8.56□□□□□ -1.04
SSBP2-211ENST00000509013 USP31Q70CQ4 1352 aa8.56□□□□□ -1.04
SSBP2-211ENST00000509013 YBX3P16989 372 aaKnown RBP eCLIP8.55□□□□□ -1.049e-8■■□□□ 11.5
SSBP2-211ENST00000509013 PRIM1P49642 420 aaKnown RBP8.55□□□□□ -1.04
SSBP2-211ENST00000509013 ROCK2O75116 1388 aaKnown RBP8.55□□□□□ -1.04
SSBP2-211ENST00000509013 GOLGB1Q14789 3259 aaKnown RBP8.55□□□□□ -1.04
SSBP2-211ENST00000509013 HDGFL2Q7Z4V5 671 aaPredicted RBP8.54□□□□□ -1.04
SSBP2-211ENST00000509013 TMC1Q8TDI8 760 aa8.54□□□□□ -1.04
SSBP2-211ENST00000509013 LTV1Q96GA3 475 aaPredicted RBP8.54□□□□□ -1.04
SSBP2-211ENST00000509013 CHD4Q14839 1912 aa8.53□□□□□ -1.04
SSBP2-211ENST00000509013 IP6K1Q92551 441 aa8.53□□□□□ -1.04
SSBP2-211ENST00000509013 GPBP1L1Q9HC44 474 aaPredicted RBP8.53□□□□□ -1.04
SSBP2-211ENST00000509013 CCNL1Q9UK58 526 aaPredicted RBP8.53□□□□□ -1.04
SSBP2-211ENST00000509013 RGPD5Q99666 1765 aa8.53□□□□□ -1.04
SSBP2-211ENST00000509013 ANKRD36BQ8N2N9 1353 aa8.52□□□□□ -1.05
SSBP2-211ENST00000509013 SBNO2Q9Y2G9 1366 aa8.52□□□□□ -1.05
SSBP2-211ENST00000509013 MSL1Q68DK7 614 aa8.52□□□□□ -1.05
SSBP2-211ENST00000509013 COL23A1Q86Y22 540 aaPredicted RBP8.52□□□□□ -1.05
SSBP2-211ENST00000509013 ZCRB1Q8TBF4 217 aaKnown RBP8.52□□□□□ -1.05
SSBP2-211ENST00000509013 ATP10DQ9P241 1426 aa8.52□□□□□ -1.05
SSBP2-211ENST00000509013 BTAF1O14981 1849 aa8.52□□□□□ -1.05
SSBP2-211ENST00000509013 HSPA6P17066 643 aa8.51□□□□□ -1.05
SSBP2-211ENST00000509013 SIN3AQ96ST3 1273 aa8.51□□□□□ -1.05
SSBP2-211ENST00000509013 SLC12A5Q9H2X9 1139 aa8.51□□□□□ -1.05
SSBP2-211ENST00000509013 TERF2IPQ9NYB0 399 aa8.51□□□□□ -1.05
SSBP2-211ENST00000509013 CD2APQ9Y5K6 639 aa8.51□□□□□ -1.05
SSBP2-211ENST00000509013 SHANK3Q9BYB0 1731 aa8.51□□□□□ -1.05
SSBP2-211ENST00000509013 USP47Q96K76 1375 aa8.5□□□□□ -1.05
SSBP2-211ENST00000509013 AMPHP49418 695 aa8.5□□□□□ -1.05
SSBP2-211ENST00000509013 NEUROD1Q13562 356 aa8.5□□□□□ -1.05
SSBP2-211ENST00000509013 EDC4Q6P2E9 1401 aaKnown RBP8.5□□□□□ -1.05
SSBP2-211ENST00000509013 ZNF526Q8TF50 670 aaPredicted RBP8.5□□□□□ -1.05
SSBP2-211ENST00000509013 CD163L1Q9NR16 1453 aa8.5□□□□□ -1.05
SSBP2-211ENST00000509013 NSD2O96028 1365 aa8.49□□□□□ -1.05
SSBP2-211ENST00000509013 CD44P16070 742 aaKnown RBP8.49□□□□□ -1.05
SSBP2-211ENST00000509013 HMGB2P26583 209 aaKnown RBP8.49□□□□□ -1.05
SSBP2-211ENST00000509013 HOXC9P31274 260 aa8.49□□□□□ -1.05
SSBP2-211ENST00000509013 FLAD1Q8NFF5 587 aa8.49□□□□□ -1.05
SSBP2-211ENST00000509013 COG3Q96JB2 828 aa8.49□□□□□ -1.05
SSBP2-211ENST00000509013 CARD11Q9BXL7 1154 aa8.48□□□□□ -1.05
SSBP2-211ENST00000509013 MAP3K19Q56UN5 1328 aa8.48□□□□□ -1.05
SSBP2-211ENST00000509013 A0A1W2PP64 1363 aa8.48□□□□□ -1.05
SSBP2-211ENST00000509013 QSER1Q2KHR3 1735 aa8.47□□□□□ -1.05
SSBP2-211ENST00000509013 POTEIP0CG38 1075 aa8.47□□□□□ -1.05
SSBP2-211ENST00000509013 FBLN1P23142 703 aa8.47□□□□□ -1.05
SSBP2-211ENST00000509013 NBPF6Q5VWK0 638 aa8.47□□□□□ -1.05
SSBP2-211ENST00000509013 NBPF4Q96M43 638 aa8.47□□□□□ -1.05
SSBP2-211ENST00000509013 COL24A1Q17RW2 1714 aa8.46□□□□□ -1.05
SSBP2-211ENST00000509013 MON2Q7Z3U7 1717 aa8.46□□□□□ -1.05
SSBP2-211ENST00000509013 USHBP1Q8N6Y0 703 aa8.46□□□□□ -1.06
SSBP2-211ENST00000509013 RAPGEF4Q8WZA2 1011 aa8.46□□□□□ -1.06
SSBP2-211ENST00000509013 PUS7Q96PZ0 661 aaKnown RBP8.46□□□□□ -1.06
SSBP2-211ENST00000509013 WWC3Q9ULE0 1092 aa8.46□□□□□ -1.06
SSBP2-211ENST00000509013 FARP1Q9Y4F1 1045 aaPredicted RBP8.46□□□□□ -1.06
SSBP2-211ENST00000509013 CGNL1Q0VF96 1302 aa8.46□□□□□ -1.06
SSBP2-211ENST00000509013 USP54Q70EL1 1684 aa8.46□□□□□ -1.06
SSBP2-211ENST00000509013 ADCY9O60503 1353 aa8.46□□□□□ -1.06
SSBP2-211ENST00000509013 MEGF6O75095 1541 aa8.45□□□□□ -1.06
SSBP2-211ENST00000509013 PHF14O94880 888 aa8.45□□□□□ -1.06
SSBP2-211ENST00000509013 TATP17735 454 aaPredicted RBP8.45□□□□□ -1.06
SSBP2-211ENST00000509013 MPRIPQ6WCQ1 1025 aa8.45□□□□□ -1.06
SSBP2-211ENST00000509013 AK7Q96M32 723 aa8.45□□□□□ -1.06
SSBP2-211ENST00000509013 IGSF1Q8N6C5 1336 aa8.45□□□□□ -1.06
SSBP2-211ENST00000509013 PALLDQ8WX93 1383 aa8.45□□□□□ -1.06
SSBP2-211ENST00000509013 LTN1O94822 1766 aa8.45□□□□□ -1.06
SSBP2-211ENST00000509013 KIF3CO14782 793 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms