RNA–Protein interactions for RNA: ENST00000508918.5

LDB2-211, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 1,498 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-211ENST00000508918 LRRC37A3O60309 1634 aa17.57■□□□□ 0.4
LDB2-211ENST00000508918 HTATSF1O43719 755 aaKnown RBP17.56■□□□□ 0.4
LDB2-211ENST00000508918 CRB1P82279 1406 aa17.56■□□□□ 0.4
LDB2-211ENST00000508918 MAP3K5Q99683 1374 aa17.56■□□□□ 0.4
LDB2-211ENST00000508918 GNAT3A8MTJ3 354 aa17.56■□□□□ 0.4
LDB2-211ENST00000508918 C20orf194Q5TEA3 1177 aa17.56■□□□□ 0.4
LDB2-211ENST00000508918 PRDM11Q9NQV5 511 aa17.56■□□□□ 0.4
LDB2-211ENST00000508918 NLRP2Q9NX02 1062 aa17.55■□□□□ 0.4
LDB2-211ENST00000508918 CSB-PGBD3P0DP91 1061 aa17.54■□□□□ 0.4
LDB2-211ENST00000508918 CRBNQ96SW2 442 aa17.54■□□□□ 0.4
LDB2-211ENST00000508918 PHLPP1O60346 1717 aa17.53■□□□□ 0.4
LDB2-211ENST00000508918 CANXP27824 592 aaKnown RBP17.53■□□□□ 0.4
LDB2-211ENST00000508918 PLEKHO1Q53GL0 409 aaPredicted RBP17.53■□□□□ 0.4
LDB2-211ENST00000508918 BCL2L13Q9BXK5 485 aa17.53■□□□□ 0.4
LDB2-211ENST00000508918 COL22A1Q8NFW1 1626 aaPredicted RBP17.53■□□□□ 0.4
LDB2-211ENST00000508918 CHL1O00533 1208 aa17.52■□□□□ 0.4
LDB2-211ENST00000508918 B4GALNT3Q6L9W6 998 aa17.52■□□□□ 0.4
LDB2-211ENST00000508918 AMOTQ4VCS5 1084 aa17.51■□□□□ 0.39
LDB2-211ENST00000508918 FRAT1Q92837 279 aaPredicted RBP17.51■□□□□ 0.39
LDB2-211ENST00000508918 TOM1O60784 492 aa17.5■□□□□ 0.39
LDB2-211ENST00000508918 ZNF530Q6P9A1 599 aaPredicted RBP17.5■□□□□ 0.39
LDB2-211ENST00000508918 IL17REQ8NFR9 667 aa17.5■□□□□ 0.39
LDB2-211ENST00000508918 SSH1Q8WYL5 1049 aa17.5■□□□□ 0.39
LDB2-211ENST00000508918 SMC4Q9NTJ3 1288 aa17.5■□□□□ 0.39
LDB2-211ENST00000508918 VIRMAQ69YN4 1812 aaKnown RBP17.5■□□□□ 0.39
LDB2-211ENST00000508918 COL16A1Q07092 1604 aaPredicted RBP17.5■□□□□ 0.39
LDB2-211ENST00000508918 TSPYL6Q8N831 410 aa17.5■□□□□ 0.39
LDB2-211ENST00000508918 COL5A2P05997 1499 aaPredicted RBP17.49■□□□□ 0.39
LDB2-211ENST00000508918 VAMP4O75379 141 aa17.49■□□□□ 0.39
LDB2-211ENST00000508918 PDE3AQ14432 1141 aa17.49■□□□□ 0.39
LDB2-211ENST00000508918 ALDH1L2Q3SY69 923 aa17.49■□□□□ 0.39
LDB2-211ENST00000508918 AKAP4Q5JQC9 854 aa17.49■□□□□ 0.39
LDB2-211ENST00000508918 C8orf58Q8NAV2 365 aa17.49■□□□□ 0.39
LDB2-211ENST00000508918 RAPGEF4Q8WZA2 1011 aa17.49■□□□□ 0.39
LDB2-211ENST00000508918 ZNF428Q96B54 188 aa17.49■□□□□ 0.39
LDB2-211ENST00000508918 ELL2O00472 640 aaPredicted RBP17.48■□□□□ 0.39
LDB2-211ENST00000508918 TWISTNBQ3B726 338 aaPredicted RBP17.48■□□□□ 0.39
LDB2-211ENST00000508918 CCDC136Q96JN2 1154 aa17.48■□□□□ 0.39
LDB2-211ENST00000508918 TSPYL4Q9UJ04 414 aa17.48■□□□□ 0.39
LDB2-211ENST00000508918 WDR17Q8IZU2 1322 aa17.48■□□□□ 0.39
LDB2-211ENST00000508918 MEGF6O75095 1541 aa17.47■□□□□ 0.39
LDB2-211ENST00000508918 TATP17735 454 aaPredicted RBP17.47■□□□□ 0.39
LDB2-211ENST00000508918 PIP4K2BP78356 416 aa17.47■□□□□ 0.39
LDB2-211ENST00000508918 C1orf141Q5JVX7 400 aa17.47■□□□□ 0.39
LDB2-211ENST00000508918 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
LDB2-211ENST00000508918 CEMIPQ8WUJ3 1361 aa17.47■□□□□ 0.39
LDB2-211ENST00000508918 COL14A1Q05707 1796 aaKnown RBP17.46■□□□□ 0.39
LDB2-211ENST00000508918 ZKSCAN2Q63HK3 967 aa17.45■□□□□ 0.38
LDB2-211ENST00000508918 PANK1Q8TE04 598 aa17.45■□□□□ 0.38
LDB2-211ENST00000508918 PLEKHG2Q9H7P9 1386 aa17.45■□□□□ 0.38
LDB2-211ENST00000508918 PKD1L3Q7Z443 1732 aa17.45■□□□□ 0.38
LDB2-211ENST00000508918 UBAP1LF5GYI3 381 aa17.44■□□□□ 0.38
LDB2-211ENST00000508918 TAF7Q15545 349 aaPredicted RBP17.44■□□□□ 0.38
LDB2-211ENST00000508918 TOM1L2Q6ZVM7 507 aa17.44■□□□□ 0.38
LDB2-211ENST00000508918 PELP1Q8IZL8 1130 aaKnown RBP17.44■□□□□ 0.38
LDB2-211ENST00000508918 LGR6Q9HBX8 967 aa17.44■□□□□ 0.38
LDB2-211ENST00000508918 TNNQ9UQP3 1299 aa17.44■□□□□ 0.38
LDB2-211ENST00000508918 PARP4Q9UKK3 1724 aaKnown RBP17.44■□□□□ 0.38
LDB2-211ENST00000508918 ADAMTS7Q9UKP4 1686 aa17.44■□□□□ 0.38
LDB2-211ENST00000508918 KRT24Q2M2I5 525 aa17.44■□□□□ 0.38
LDB2-211ENST00000508918 MPRIPQ6WCQ1 1025 aa17.44■□□□□ 0.38
LDB2-211ENST00000508918 BABAM1Q9NWV8 329 aa17.44■□□□□ 0.38
LDB2-211ENST00000508918 SPG7Q9UQ90 795 aa17.44■□□□□ 0.38
LDB2-211ENST00000508918 KIF16BQ96L93 1317 aa17.43■□□□□ 0.38
LDB2-211ENST00000508918 OVOS2A0A0G2JMS6 1433 aa17.43■□□□□ 0.38
LDB2-211ENST00000508918 MRPL50Q8N5N7 158 aaKnown RBP17.43■□□□□ 0.38
LDB2-211ENST00000508918 STRN4Q9NRL3 753 aa17.43■□□□□ 0.38
LDB2-211ENST00000508918 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.43■□□□□ 0.38
LDB2-211ENST00000508918 NOB1Q9ULX3 412 aaKnown RBP17.43■□□□□ 0.38
LDB2-211ENST00000508918 RNMTO43148 476 aaKnown RBP17.42■□□□□ 0.38
LDB2-211ENST00000508918 RLBP1P12271 317 aa17.42■□□□□ 0.38
LDB2-211ENST00000508918 BRPF1P55201 1214 aaPredicted RBP17.42■□□□□ 0.38
LDB2-211ENST00000508918 EVA1CP58658 441 aa17.42■□□□□ 0.38
LDB2-211ENST00000508918 COG6Q9Y2V7 657 aa17.42■□□□□ 0.38
LDB2-211ENST00000508918 KDM3BQ7LBC6 1761 aa17.42■□□□□ 0.38
LDB2-211ENST00000508918 MS4A1P11836 297 aa17.41■□□□□ 0.38
LDB2-211ENST00000508918 CLUAP1Q96AJ1 413 aa17.41■□□□□ 0.38
LDB2-211ENST00000508918 CARD10Q9BWT7 1032 aa17.41■□□□□ 0.38
LDB2-211ENST00000508918 SIPA1L3O60292 1781 aaPredicted RBP17.4■□□□□ 0.38
LDB2-211ENST00000508918 SCN11AQ9UI33 1791 aa17.4■□□□□ 0.38
LDB2-211ENST00000508918 TCERG1O14776 1098 aaKnown RBP17.4■□□□□ 0.38
LDB2-211ENST00000508918 IPO8O15397 1037 aaKnown RBP17.4■□□□□ 0.38
LDB2-211ENST00000508918 TEFQ10587 303 aa17.4■□□□□ 0.38
LDB2-211ENST00000508918 LARP1Q6PKG0 1096 aaKnown RBP17.4■□□□□ 0.38
LDB2-211ENST00000508918 ATF7IPQ6VMQ6 1270 aa17.4■□□□□ 0.38
LDB2-211ENST00000508918 BTG4Q9NY30 223 aa17.4■□□□□ 0.38
LDB2-211ENST00000508918 TRIM27P14373 513 aa17.39■□□□□ 0.37
LDB2-211ENST00000508918 FTSJ3Q8IY81 847 aaKnown RBP17.39■□□□□ 0.37
LDB2-211ENST00000508918 DZIP1LQ8IYY4 767 aaKnown RBP17.39■□□□□ 0.37
LDB2-211ENST00000508918 PHKG2P15735 406 aa17.38■□□□□ 0.37
LDB2-211ENST00000508918 PLCH1Q4KWH8 1693 aa17.38■□□□□ 0.37
LDB2-211ENST00000508918 IFNL2Q8IZJ0 200 aa17.37■□□□□ 0.37
LDB2-211ENST00000508918 KDM6AO15550 1401 aaPredicted RBP17.37■□□□□ 0.37
LDB2-211ENST00000508918 CYP27B1O15528 508 aa17.36■□□□□ 0.37
LDB2-211ENST00000508918 IL2RBP14784 551 aa17.36■□□□□ 0.37
LDB2-211ENST00000508918 MVPQ14764 893 aaKnown RBP17.36■□□□□ 0.37
LDB2-211ENST00000508918 CERKQ8TCT0 537 aa17.36■□□□□ 0.37
LDB2-211ENST00000508918 ARHGAP45Q92619 1136 aa17.36■□□□□ 0.37
LDB2-211ENST00000508918 BTBD11A6QL63 1104 aa17.35■□□□□ 0.37
LDB2-211ENST00000508918 SHANK3Q9BYB0 1731 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms