RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 FLT4P35916 1363 aa11.95□□□□□ -0.5
SNCA-211ENST00000508895 PPM1GO15355 546 aaPredicted RBP11.95□□□□□ -0.5
SNCA-211ENST00000508895 ANO8Q9HCE9 1232 aaPredicted RBP11.95□□□□□ -0.5
SNCA-211ENST00000508895 RGPD3A6NKT7 1758 aaPredicted RBP11.95□□□□□ -0.5
SNCA-211ENST00000508895 RGPD4Q7Z3J3 1758 aa11.95□□□□□ -0.5
SNCA-211ENST00000508895 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
SNCA-211ENST00000508895 TOGARAM1Q9Y4F4 1720 aa11.94□□□□□ -0.5
SNCA-211ENST00000508895 PER1O15534 1290 aaPredicted RBP11.94□□□□□ -0.5
SNCA-211ENST00000508895 AMER1Q5JTC6 1135 aaPredicted RBP11.94□□□□□ -0.5
SNCA-211ENST00000508895 DDX54Q8TDD1 881 aaKnown RBP11.94□□□□□ -0.5
SNCA-211ENST00000508895 BCL11BQ9C0K0 894 aaPredicted RBP11.94□□□□□ -0.5
SNCA-211ENST00000508895 PDGFDQ9GZP0 370 aaPredicted RBP11.94□□□□□ -0.5
SNCA-211ENST00000508895 NSD2O96028 1365 aa11.93□□□□□ -0.5
SNCA-211ENST00000508895 EYA1Q99502 592 aa11.93□□□□□ -0.5
SNCA-211ENST00000508895 PKD1L3Q7Z443 1732 aa11.93□□□□□ -0.5
SNCA-211ENST00000508895 EIF4A2Q14240 407 aaKnown RBP11.92□□□□□ -0.5
SNCA-211ENST00000508895 ITGB4P16144 1822 aa11.91□□□□□ -0.5
SNCA-211ENST00000508895 KCNQ4P56696 695 aa11.91□□□□□ -0.5
SNCA-211ENST00000508895 ZCRB1Q8TBF4 217 aaKnown RBP11.91□□□□□ -0.5
SNCA-211ENST00000508895 SMG6Q86US8 1419 aaKnown RBP11.91□□□□□ -0.5
SNCA-211ENST00000508895 KIF24Q5T7B8 1368 aa11.91□□□□□ -0.5
SNCA-211ENST00000508895 PAPPAQ13219 1627 aa11.9□□□□□ -0.5
SNCA-211ENST00000508895 PLSCR1O15162 318 aa11.9□□□□□ -0.5
SNCA-211ENST00000508895 CYP27B1O15528 508 aa11.9□□□□□ -0.5
SNCA-211ENST00000508895 LRRC4BQ9NT99 713 aa11.9□□□□□ -0.5
SNCA-211ENST00000508895 CASZ1Q86V15 1759 aa11.9□□□□□ -0.51
SNCA-211ENST00000508895 TUBGCP6Q96RT7 1819 aa11.89□□□□□ -0.51
SNCA-211ENST00000508895 PRIM1P49642 420 aaKnown RBP11.89□□□□□ -0.51
SNCA-211ENST00000508895 CNGB1Q14028 1251 aaPredicted RBP11.89□□□□□ -0.51
SNCA-211ENST00000508895 TXNRD1Q16881 649 aa11.89□□□□□ -0.51
SNCA-211ENST00000508895 PARD3Q8TEW0 1356 aa11.89□□□□□ -0.51
SNCA-211ENST00000508895 MORC1Q86VD1 984 aa11.88□□□□□ -0.51
SNCA-211ENST00000508895 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
SNCA-211ENST00000508895 LY75O60449 1722 aa11.88□□□□□ -0.51
SNCA-211ENST00000508895 TATP17735 454 aaPredicted RBP11.87□□□□□ -0.51
SNCA-211ENST00000508895 CC2D1BQ5T0F9 858 aaKnown RBP11.87□□□□□ -0.51
SNCA-211ENST00000508895 KNSTRNQ9Y448 316 aa11.87□□□□□ -0.51
SNCA-211ENST00000508895 VIRMAQ69YN4 1812 aaKnown RBP11.86□□□□□ -0.51
SNCA-211ENST00000508895 RAPGEF4Q8WZA2 1011 aa11.86□□□□□ -0.51
SNCA-211ENST00000508895 IGSF1Q8N6C5 1336 aa11.86□□□□□ -0.51
SNCA-211ENST00000508895 ZNF827Q17R98 1081 aa11.85□□□□□ -0.51
SNCA-211ENST00000508895 UTRNP46939 3433 aa11.84□□□□□ -0.51
SNCA-211ENST00000508895 IL13P35225 146 aa11.84□□□□□ -0.51
SNCA-211ENST00000508895 SYTL4Q96C24 671 aaPredicted RBP11.84□□□□□ -0.51
SNCA-211ENST00000508895 TAF1LQ8IZX4 1826 aa11.83□□□□□ -0.51
SNCA-211ENST00000508895 COL3A1P02461 1466 aaPredicted RBP11.83□□□□□ -0.52
SNCA-211ENST00000508895 MTHFSP49914 203 aa11.83□□□□□ -0.52
SNCA-211ENST00000508895 PCDH11XQ9BZA7 1347 aa11.82□□□□□ -0.52
SNCA-211ENST00000508895 PCDH11YQ9BZA8 1340 aa11.82□□□□□ -0.52
SNCA-211ENST00000508895 NPC1L1Q9UHC9 1359 aa11.81□□□□□ -0.52
SNCA-211ENST00000508895 SENP3-EIF4A1A0A087X0R7 540 aa11.81□□□□□ -0.52
SNCA-211ENST00000508895 PHKG2P15735 406 aa11.81□□□□□ -0.52
SNCA-211ENST00000508895 NKX1-1Q15270 411 aaPredicted RBP11.81□□□□□ -0.52
SNCA-211ENST00000508895 SLC15A2Q16348 729 aa11.81□□□□□ -0.52
SNCA-211ENST00000508895 SMIM5Q71RC9 77 aa11.81□□□□□ -0.52
SNCA-211ENST00000508895 AMIGO3Q86WK7 504 aa11.81□□□□□ -0.52
SNCA-211ENST00000508895 PIGBQ92521 554 aa11.81□□□□□ -0.52
SNCA-211ENST00000508895 AKT1S1Q96B36 256 aa11.81□□□□□ -0.52
SNCA-211ENST00000508895 KDM6AO15550 1401 aaPredicted RBP11.8□□□□□ -0.52
SNCA-211ENST00000508895 NBPF14Q5TI25 921 aa11.8□□□□□ -0.52
SNCA-211ENST00000508895 C5P01031 1676 aa11.79□□□□□ -0.52
SNCA-211ENST00000508895 ZBTB7AO95365 584 aa11.79□□□□□ -0.52
SNCA-211ENST00000508895 SULT6B1Q6IMI4 303 aa11.79□□□□□ -0.52
SNCA-211ENST00000508895 MPRIPQ6WCQ1 1025 aa11.79□□□□□ -0.52
SNCA-211ENST00000508895 QSER1Q2KHR3 1735 aa11.78□□□□□ -0.52
SNCA-211ENST00000508895 HMOX1P09601 288 aa11.78□□□□□ -0.52
SNCA-211ENST00000508895 ASAP1Q9ULH1 1129 aa11.78□□□□□ -0.52
SNCA-211ENST00000508895 ATF5Q9Y2D1 282 aaPredicted RBP11.78□□□□□ -0.52
SNCA-211ENST00000508895 KDRP35968 1356 aa11.78□□□□□ -0.52
SNCA-211ENST00000508895 SCN11AQ9UI33 1791 aa11.77□□□□□ -0.52
SNCA-211ENST00000508895 PTGER2P43116 358 aa11.77□□□□□ -0.53
SNCA-211ENST00000508895 SLC4A9Q96Q91 983 aa11.77□□□□□ -0.53
SNCA-211ENST00000508895 STK32BQ9NY57 414 aa11.77□□□□□ -0.53
SNCA-211ENST00000508895 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.53
SNCA-211ENST00000508895 SPG7Q9UQ90 795 aa11.77□□□□□ -0.53
SNCA-211ENST00000508895 PNPLA7Q6ZV29 1317 aa11.77□□□□□ -0.53
SNCA-211ENST00000508895 SGIP1Q9BQI5 828 aa11.76□□□□□ -0.53
SNCA-211ENST00000508895 COL24A1Q17RW2 1714 aa11.76□□□□□ -0.53
SNCA-211ENST00000508895 PALLDQ8WX93 1383 aa11.76□□□□□ -0.53
SNCA-211ENST00000508895 UBR3Q6ZT12 1888 aa11.75□□□□□ -0.53
SNCA-211ENST00000508895 ZNF316A6NFI3 1004 aaPredicted RBP11.75□□□□□ -0.53
SNCA-211ENST00000508895 ITPK1Q13572 414 aa11.75□□□□□ -0.53
SNCA-211ENST00000508895 ZNF530Q6P9A1 599 aaPredicted RBP11.75□□□□□ -0.53
SNCA-211ENST00000508895 IFNL2Q8IZJ0 200 aa11.75□□□□□ -0.53
SNCA-211ENST00000508895 ATG3Q9NT62 314 aa11.75□□□□□ -0.53
SNCA-211ENST00000508895 CCNL1Q9UK58 526 aaPredicted RBP11.75□□□□□ -0.53
SNCA-211ENST00000508895 MYH14Q7Z406 1995 aaKnown RBP11.75□□□□□ -0.53
SNCA-211ENST00000508895 PPP2R1AP30153 589 aa11.74□□□□□ -0.53
SNCA-211ENST00000508895 DDX10Q13206 875 aaKnown RBP11.74□□□□□ -0.53
SNCA-211ENST00000508895 SLC27A3Q5K4L6 730 aa11.74□□□□□ -0.53
SNCA-211ENST00000508895 LGR6Q9HBX8 967 aa11.74□□□□□ -0.53
SNCA-211ENST00000508895 C4BP0C0L5 1744 aa11.74□□□□□ -0.53
SNCA-211ENST00000508895 DIAPH1O60610 1272 aaKnown RBP11.73□□□□□ -0.53
SNCA-211ENST00000508895 PLEKHO1Q53GL0 409 aaPredicted RBP11.73□□□□□ -0.53
SNCA-211ENST00000508895 COL23A1Q86Y22 540 aaPredicted RBP11.73□□□□□ -0.53
SNCA-211ENST00000508895 LINC00116Q8NCU8 138 aa11.73□□□□□ -0.53
SNCA-211ENST00000508895 DLG5Q8TDM6 1919 aa11.73□□□□□ -0.53
SNCA-211ENST00000508895 SPON1Q9HCB6 807 aa11.73□□□□□ -0.53
SNCA-211ENST00000508895 ADAMTS7Q9UKP4 1686 aa11.73□□□□□ -0.53
SNCA-211ENST00000508895 MTHFSDQ2M296 383 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms