RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 ESF1Q9H501 851 aaKnown RBP11.16□□□□□ -0.62
GYPB-210ENST00000508841 WASF2Q9Y6W5 498 aa11.16□□□□□ -0.62
GYPB-210ENST00000508841 FAM196BA6NMK8 535 aa11.15□□□□□ -0.62
GYPB-210ENST00000508841 ERVH48-1M5A8F1 160 aa11.15□□□□□ -0.62
GYPB-210ENST00000508841 WIPF1O43516 503 aa11.15□□□□□ -0.62
GYPB-210ENST00000508841 ELOAQ14241 798 aaKnown RBP11.15□□□□□ -0.62
GYPB-210ENST00000508841 LARP1Q6PKG0 1096 aaKnown RBP11.15□□□□□ -0.62
GYPB-210ENST00000508841 CYP4X1Q8N118 509 aa11.15□□□□□ -0.62
GYPB-210ENST00000508841 DEPDC4Q8N2C3 294 aa11.15□□□□□ -0.62
GYPB-210ENST00000508841 TOR4AQ9NXH8 423 aa11.15□□□□□ -0.62
GYPB-210ENST00000508841 ALDH1A1P00352 501 aa11.14□□□□□ -0.63
GYPB-210ENST00000508841 CSB-PGBD3P0DP91 1061 aa11.14□□□□□ -0.63
GYPB-210ENST00000508841 RAB15P59190 212 aa11.14□□□□□ -0.63
GYPB-210ENST00000508841 CTC1Q2NKJ3 1217 aa11.14□□□□□ -0.63
GYPB-210ENST00000508841 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
GYPB-210ENST00000508841 EMILIN1Q9Y6C2 1016 aa11.14□□□□□ -0.63
GYPB-210ENST00000508841 TTC24A2A3L6 582 aaPredicted RBP11.13□□□□□ -0.63
GYPB-210ENST00000508841 USTQ9Y2C2 406 aa11.13□□□□□ -0.63
GYPB-210ENST00000508841 ERVK-9P63128 1117 aa11.12□□□□□ -0.63
GYPB-210ENST00000508841 CC2D2BQ6DHV5 1058 aa11.12□□□□□ -0.63
GYPB-210ENST00000508841 RASA1P20936 1047 aa11.11□□□□□ -0.63
GYPB-210ENST00000508841 TSGA10IPQ3SY00 556 aa11.11□□□□□ -0.63
GYPB-210ENST00000508841 LARGE2Q8N3Y3 721 aa11.11□□□□□ -0.63
GYPB-210ENST00000508841 USP17L15C9J2P7 530 aa11.1□□□□□ -0.63
GYPB-210ENST00000508841 USP17L10C9JJH3 530 aa11.1□□□□□ -0.63
GYPB-210ENST00000508841 USP17L13C9JLJ4 530 aa11.1□□□□□ -0.63
GYPB-210ENST00000508841 USP17L12C9JPN9 530 aa11.1□□□□□ -0.63
GYPB-210ENST00000508841 USP17L11C9JVI0 530 aa11.1□□□□□ -0.63
GYPB-210ENST00000508841 USP17L21D6R901 530 aa11.1□□□□□ -0.63
GYPB-210ENST00000508841 USP17L18D6R9N7 530 aa11.1□□□□□ -0.63
GYPB-210ENST00000508841 USP17L22D6RA61 530 aa11.1□□□□□ -0.63
GYPB-210ENST00000508841 USP17L17D6RBQ6 530 aa11.1□□□□□ -0.63
GYPB-210ENST00000508841 USP17L19D6RCP7 530 aa11.1□□□□□ -0.63
GYPB-210ENST00000508841 USP17L20D6RJB6 530 aa11.1□□□□□ -0.63
GYPB-210ENST00000508841 SMCPP49901 116 aaPredicted RBP11.1□□□□□ -0.63
GYPB-210ENST00000508841 USP17L24Q0WX57 530 aa11.1□□□□□ -0.63
GYPB-210ENST00000508841 NNTQ13423 1086 aa11.1□□□□□ -0.63
GYPB-210ENST00000508841 PPP1R26Q5T8A7 1209 aaPredicted RBP11.1□□□□□ -0.63
GYPB-210ENST00000508841 CDCA7Q9BWT1 371 aaPredicted RBP11.1□□□□□ -0.63
GYPB-210ENST00000508841 DNAAF2Q9NVR5 837 aaKnown RBP11.1□□□□□ -0.63
GYPB-210ENST00000508841 RBM19Q9Y4C8 960 aaKnown RBP11.1□□□□□ -0.63
GYPB-210ENST00000508841 GTF2IP78347 998 aa11.09□□□□□ -0.63
GYPB-210ENST00000508841 OGFOD1Q8N543 542 aa11.09□□□□□ -0.63
GYPB-210ENST00000508841 RETREG2Q8NC44 543 aa11.09□□□□□ -0.63
GYPB-210ENST00000508841 PDIA4P13667 645 aaKnown RBP11.08□□□□□ -0.64
GYPB-210ENST00000508841 CDCA8Q53HL2 280 aa11.08□□□□□ -0.64
GYPB-210ENST00000508841 NR3C2P08235 984 aa11.07□□□□□ -0.64
GYPB-210ENST00000508841 PTK7Q13308 1070 aa11.07□□□□□ -0.64
GYPB-210ENST00000508841 CYP2U1Q7Z449 544 aa11.07□□□□□ -0.64
GYPB-210ENST00000508841 ZNF784Q8NCA9 323 aaPredicted RBP11.07□□□□□ -0.64
GYPB-210ENST00000508841 NOVA2Q9UNW9 492 aaKnown RBP11.07□□□□□ -0.64
GYPB-210ENST00000508841 CRTC2Q53ET0 693 aaPredicted RBP11.06□□□□□ -0.64
GYPB-210ENST00000508841 SIX5Q8N196 739 aa11.06□□□□□ -0.64
GYPB-210ENST00000508841 PSME1Q06323 249 aa11.05□□□□□ -0.64
GYPB-210ENST00000508841 ANKMY2Q8IV38 441 aa11.05□□□□□ -0.64
GYPB-210ENST00000508841 TRAIPQ9BWF2 469 aa11.05□□□□□ -0.64
GYPB-210ENST00000508841 CYLDQ9NQC7 956 aa11.05□□□□□ -0.64
GYPB-210ENST00000508841 TMPRSS4Q9NRS4 437 aa11.05□□□□□ -0.64
GYPB-210ENST00000508841 CLDN10P78369 228 aa11.04□□□□□ -0.64
GYPB-210ENST00000508841 FAM200AQ8TCP9 573 aa11.04□□□□□ -0.64
GYPB-210ENST00000508841 PCDHGA11Q9Y5H2 935 aa11.04□□□□□ -0.64
GYPB-210ENST00000508841 J3QL48 77 aa11.03□□□□□ -0.64
GYPB-210ENST00000508841 TERTO14746 1132 aaKnown RBP11.03□□□□□ -0.64
GYPB-210ENST00000508841 SCTRP47872 440 aa11.03□□□□□ -0.64
GYPB-210ENST00000508841 LILRA1O75019 489 aa11.02□□□□□ -0.65
GYPB-210ENST00000508841 SMPD1P17405 629 aa11.02□□□□□ -0.65
GYPB-210ENST00000508841 LCE2CQ5TA81 110 aa11.02□□□□□ -0.65
GYPB-210ENST00000508841 CCDC102BQ68D86 513 aa11.02□□□□□ -0.65
GYPB-210ENST00000508841 ZNF594Q96JF6 807 aaPredicted RBP11.02□□□□□ -0.65
GYPB-210ENST00000508841 OSBPL3Q9H4L5 887 aa11.02□□□□□ -0.65
GYPB-210ENST00000508841 ZBTB7BO15156 539 aaPredicted RBP11.01□□□□□ -0.65
GYPB-210ENST00000508841 GNRH1P01148 92 aa11.01□□□□□ -0.65
GYPB-210ENST00000508841 SNRPBP14678 240 aaKnown RBP11.01□□□□□ -0.65
GYPB-210ENST00000508841 SEC13P55735 322 aa11.01□□□□□ -0.65
GYPB-210ENST00000508841 ESCO1Q5FWF5 840 aa11.01□□□□□ -0.65
GYPB-210ENST00000508841 ATP13A2Q9NQ11 1180 aa11.01□□□□□ -0.65
GYPB-210ENST00000508841 ZMIZ1Q9ULJ6 1067 aa11.01□□□□□ -0.65
GYPB-210ENST00000508841 M0R2N6 131 aa11□□□□□ -0.65
GYPB-210ENST00000508841 WASLO00401 505 aaPredicted RBP11□□□□□ -0.65
GYPB-210ENST00000508841 ZIC2O95409 532 aaPredicted RBP11□□□□□ -0.65
GYPB-210ENST00000508841 WDR4P57081 412 aaKnown RBP11□□□□□ -0.65
GYPB-210ENST00000508841 DPYDQ12882 1025 aa11□□□□□ -0.65
GYPB-210ENST00000508841 SWI5Q1ZZU3 235 aa11□□□□□ -0.65
GYPB-210ENST00000508841 B4GALNT3Q6L9W6 998 aa11□□□□□ -0.65
GYPB-210ENST00000508841 TPCN2Q8NHX9 752 aa11□□□□□ -0.65
GYPB-210ENST00000508841 ADH1AP07327 375 aa10.99□□□□□ -0.65
GYPB-210ENST00000508841 KLF16Q9BXK1 252 aaPredicted RBP10.99□□□□□ -0.65
GYPB-210ENST00000508841 BACH1O14867 736 aa10.98□□□□□ -0.65
GYPB-210ENST00000508841 TIMP2P16035 220 aa10.98□□□□□ -0.65
GYPB-210ENST00000508841 TMEM164Q5U3C3 297 aa10.98□□□□□ -0.65
GYPB-210ENST00000508841 Q6ZVU0 165 aa10.98□□□□□ -0.65
GYPB-210ENST00000508841 ITPKCQ96DU7 683 aa10.98□□□□□ -0.65
GYPB-210ENST00000508841 SENP2Q9HC62 589 aa10.98□□□□□ -0.65
GYPB-210ENST00000508841 KIAA1024Q9UPX6 916 aa10.98□□□□□ -0.65
GYPB-210ENST00000508841 TMEM88BA6NKF7 163 aa10.97□□□□□ -0.65
GYPB-210ENST00000508841 STK32AQ8WU08 396 aa10.97□□□□□ -0.65
GYPB-210ENST00000508841 TRIM47Q96LD4 638 aa10.97□□□□□ -0.65
GYPB-210ENST00000508841 PATL2C9JE40 543 aaKnown RBP10.96□□□□□ -0.65
GYPB-210ENST00000508841 DKK1O94907 266 aa10.96□□□□□ -0.65
GYPB-210ENST00000508841 ADD1P35611 737 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms