RNA–Protein interactions for RNA: ENST00000508828.1

SPSB4-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 3

Gene SPSB4, Length 537 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-204ENST00000508828 ERBB3P21860 1342 aa17.06■□□□□ 0.32
SPSB4-204ENST00000508828 FAM83GA6ND36 823 aa17.06■□□□□ 0.32
SPSB4-204ENST00000508828 BCAR3O75815 825 aa17.06■□□□□ 0.32
SPSB4-204ENST00000508828 CABLES1Q8TDN4 633 aa17.06■□□□□ 0.32
SPSB4-204ENST00000508828 KIAA0232Q92628 1395 aa17.05■□□□□ 0.32
SPSB4-204ENST00000508828 MAP3K5Q99683 1374 aa17.05■□□□□ 0.32
SPSB4-204ENST00000508828 HAP1P54257 671 aaPredicted RBP17.05■□□□□ 0.32
SPSB4-204ENST00000508828 DCTN1Q14203 1278 aa17.05■□□□□ 0.32
SPSB4-204ENST00000508828 EXOC6Q8TAG9 804 aa17.05■□□□□ 0.32
SPSB4-204ENST00000508828 LRRC59Q96AG4 307 aaKnown RBP17.05■□□□□ 0.32
SPSB4-204ENST00000508828 ZNF428Q96B54 188 aa17.05■□□□□ 0.32
SPSB4-204ENST00000508828 GNAT3A8MTJ3 354 aa17.04■□□□□ 0.32
SPSB4-204ENST00000508828 CRBNQ96SW2 442 aa17.04■□□□□ 0.32
SPSB4-204ENST00000508828 MBIPQ9NS73 344 aa17.04■□□□□ 0.32
SPSB4-204ENST00000508828 AMOTQ4VCS5 1084 aa17.03■□□□□ 0.32
SPSB4-204ENST00000508828 PLEKHO1Q53GL0 409 aaPredicted RBP17.03■□□□□ 0.32
SPSB4-204ENST00000508828 MCM10Q7L590 875 aa17.03■□□□□ 0.32
SPSB4-204ENST00000508828 AXIN2Q9Y2T1 843 aa17.03■□□□□ 0.32
SPSB4-204ENST00000508828 CRB1P82279 1406 aa17.03■□□□□ 0.32
SPSB4-204ENST00000508828 PLEKHG2Q9H7P9 1386 aa17.02■□□□□ 0.32
SPSB4-204ENST00000508828 PDE3AQ14432 1141 aa17.02■□□□□ 0.32
SPSB4-204ENST00000508828 ALDH1L2Q3SY69 923 aa17.02■□□□□ 0.32
SPSB4-204ENST00000508828 B4GALNT3Q6L9W6 998 aa17.02■□□□□ 0.32
SPSB4-204ENST00000508828 CCDC136Q96JN2 1154 aa17.02■□□□□ 0.32
SPSB4-204ENST00000508828 SMC4Q9NTJ3 1288 aa17.02■□□□□ 0.32
SPSB4-204ENST00000508828 CSB-PGBD3P0DP91 1061 aa17.01■□□□□ 0.31
SPSB4-204ENST00000508828 PRDM11Q9NQV5 511 aa17.01■□□□□ 0.31
SPSB4-204ENST00000508828 CHL1O00533 1208 aa17■□□□□ 0.31
SPSB4-204ENST00000508828 MS4A1P11836 297 aa17■□□□□ 0.31
SPSB4-204ENST00000508828 CHRNA2Q15822 529 aa17■□□□□ 0.31
SPSB4-204ENST00000508828 C20orf194Q5TEA3 1177 aa17■□□□□ 0.31
SPSB4-204ENST00000508828 KIF16BQ96L93 1317 aa16.99■□□□□ 0.31
SPSB4-204ENST00000508828 FRAT1Q92837 279 aaPredicted RBP16.99■□□□□ 0.31
SPSB4-204ENST00000508828 BCL2L13Q9BXK5 485 aa16.99■□□□□ 0.31
SPSB4-204ENST00000508828 NLRP2Q9NX02 1062 aa16.99■□□□□ 0.31
SPSB4-204ENST00000508828 COL22A1Q8NFW1 1626 aaPredicted RBP16.99■□□□□ 0.31
SPSB4-204ENST00000508828 ZKSCAN2Q63HK3 967 aa16.98■□□□□ 0.31
SPSB4-204ENST00000508828 ZNF530Q6P9A1 599 aaPredicted RBP16.98■□□□□ 0.31
SPSB4-204ENST00000508828 SSH1Q8WYL5 1049 aa16.98■□□□□ 0.31
SPSB4-204ENST00000508828 RAPGEF4Q8WZA2 1011 aa16.98■□□□□ 0.31
SPSB4-204ENST00000508828 OVOS2A0A0G2JMS6 1433 aa16.97■□□□□ 0.31
SPSB4-204ENST00000508828 TATP17735 454 aaPredicted RBP16.97■□□□□ 0.31
SPSB4-204ENST00000508828 TWISTNBQ3B726 338 aaPredicted RBP16.97■□□□□ 0.31
SPSB4-204ENST00000508828 AKAP4Q5JQC9 854 aa16.97■□□□□ 0.31
SPSB4-204ENST00000508828 C1orf141Q5JVX7 400 aa16.97■□□□□ 0.31
SPSB4-204ENST00000508828 BABAM1Q9NWV8 329 aa16.97■□□□□ 0.31
SPSB4-204ENST00000508828 TSPYL4Q9UJ04 414 aa16.97■□□□□ 0.31
SPSB4-204ENST00000508828 PHLPP1O60346 1717 aa16.96■□□□□ 0.31
SPSB4-204ENST00000508828 VAMP4O75379 141 aa16.96■□□□□ 0.31
SPSB4-204ENST00000508828 COL5A2P05997 1499 aaPredicted RBP16.95■□□□□ 0.3
SPSB4-204ENST00000508828 IPO8O15397 1037 aaKnown RBP16.95■□□□□ 0.3
SPSB4-204ENST00000508828 BRPF1P55201 1214 aaPredicted RBP16.95■□□□□ 0.3
SPSB4-204ENST00000508828 WDR17Q8IZU2 1322 aa16.95■□□□□ 0.3
SPSB4-204ENST00000508828 CEMIPQ8WUJ3 1361 aa16.94■□□□□ 0.3
SPSB4-204ENST00000508828 IL17REQ8NFR9 667 aa16.94■□□□□ 0.3
SPSB4-204ENST00000508828 COL16A1Q07092 1604 aaPredicted RBP16.94■□□□□ 0.3
SPSB4-204ENST00000508828 PARP4Q9UKK3 1724 aaKnown RBP16.93■□□□□ 0.3
SPSB4-204ENST00000508828 COL14A1Q05707 1796 aaKnown RBP16.93■□□□□ 0.3
SPSB4-204ENST00000508828 AAMPQ13685 434 aa16.93■□□□□ 0.3
SPSB4-204ENST00000508828 TAF7Q15545 349 aaPredicted RBP16.93■□□□□ 0.3
SPSB4-204ENST00000508828 FTSJ3Q8IY81 847 aaKnown RBP16.93■□□□□ 0.3
SPSB4-204ENST00000508828 TSPYL6Q8N831 410 aa16.93■□□□□ 0.3
SPSB4-204ENST00000508828 C8orf58Q8NAV2 365 aa16.93■□□□□ 0.3
SPSB4-204ENST00000508828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.93■□□□□ 0.3
SPSB4-204ENST00000508828 PKD1L3Q7Z443 1732 aa16.93■□□□□ 0.3
SPSB4-204ENST00000508828 MEGF6O75095 1541 aa16.92■□□□□ 0.3
SPSB4-204ENST00000508828 VIRMAQ69YN4 1812 aaKnown RBP16.92■□□□□ 0.3
SPSB4-204ENST00000508828 DZIP1LQ8IYY4 767 aaKnown RBP16.92■□□□□ 0.3
SPSB4-204ENST00000508828 PANK1Q8TE04 598 aa16.92■□□□□ 0.3
SPSB4-204ENST00000508828 SPG7Q9UQ90 795 aa16.92■□□□□ 0.3
SPSB4-204ENST00000508828 SOS1Q07889 1333 aaPredicted RBP16.92■□□□□ 0.3
SPSB4-204ENST00000508828 ADAMTS7Q9UKP4 1686 aa16.91■□□□□ 0.3
SPSB4-204ENST00000508828 ATF7IPQ6VMQ6 1270 aa16.91■□□□□ 0.3
SPSB4-204ENST00000508828 MRPL50Q8N5N7 158 aaKnown RBP16.91■□□□□ 0.3
SPSB4-204ENST00000508828 NOB1Q9ULX3 412 aaKnown RBP16.91■□□□□ 0.3
SPSB4-204ENST00000508828 KDM3BQ7LBC6 1761 aa16.9■□□□□ 0.3
SPSB4-204ENST00000508828 ELL2O00472 640 aaPredicted RBP16.9■□□□□ 0.3
SPSB4-204ENST00000508828 TEFQ10587 303 aa16.9■□□□□ 0.3
SPSB4-204ENST00000508828 TOM1L2Q6ZVM7 507 aa16.9■□□□□ 0.3
SPSB4-204ENST00000508828 COG6Q9Y2V7 657 aa16.9■□□□□ 0.3
SPSB4-204ENST00000508828 RNMTO43148 476 aaKnown RBP16.89■□□□□ 0.29
SPSB4-204ENST00000508828 TRIM27P14373 513 aa16.88■□□□□ 0.29
SPSB4-204ENST00000508828 EVA1CP58658 441 aa16.88■□□□□ 0.29
SPSB4-204ENST00000508828 MVPQ14764 893 aaKnown RBP16.88■□□□□ 0.29
SPSB4-204ENST00000508828 ARHGAP45Q92619 1136 aa16.88■□□□□ 0.29
SPSB4-204ENST00000508828 CARD10Q9BWT7 1032 aa16.88■□□□□ 0.29
SPSB4-204ENST00000508828 MIS18AQ9NYP9 233 aa16.88■□□□□ 0.29
SPSB4-204ENST00000508828 MPRIPQ6WCQ1 1025 aa16.87■□□□□ 0.29
SPSB4-204ENST00000508828 IFNL2Q8IZJ0 200 aa16.87■□□□□ 0.29
SPSB4-204ENST00000508828 CLUAP1Q96AJ1 413 aa16.87■□□□□ 0.29
SPSB4-204ENST00000508828 TNNQ9UQP3 1299 aa16.87■□□□□ 0.29
SPSB4-204ENST00000508828 SCN11AQ9UI33 1791 aa16.87■□□□□ 0.29
SPSB4-204ENST00000508828 HSP90AB1P08238 724 aaKnown RBP16.86■□□□□ 0.29
SPSB4-204ENST00000508828 RLBP1P12271 317 aa16.86■□□□□ 0.29
SPSB4-204ENST00000508828 KRT24Q2M2I5 525 aa16.86■□□□□ 0.29
SPSB4-204ENST00000508828 API5Q9BZZ5 524 aaKnown RBP16.86■□□□□ 0.29
SPSB4-204ENST00000508828 LGR6Q9HBX8 967 aa16.86■□□□□ 0.29
SPSB4-204ENST00000508828 STRN4Q9NRL3 753 aa16.86■□□□□ 0.29
SPSB4-204ENST00000508828 SIPA1L3O60292 1781 aaPredicted RBP16.86■□□□□ 0.29
SPSB4-204ENST00000508828 PHKG2P15735 406 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms