RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 RTL1A6NKG5 1358 aa13.95□□□□□ -0.18
UBE2D3-227ENST00000508818 PPM1GO15355 546 aaPredicted RBP13.94□□□□□ -0.18
UBE2D3-227ENST00000508818 CARD14Q9BXL6 1004 aa13.94□□□□□ -0.18
UBE2D3-227ENST00000508818 SLC15A2Q16348 729 aa13.93□□□□□ -0.18
UBE2D3-227ENST00000508818 HSP90AB2PQ58FF8 381 aa13.93□□□□□ -0.18
UBE2D3-227ENST00000508818 NBPF6Q5VWK0 638 aa13.93□□□□□ -0.18
UBE2D3-227ENST00000508818 NBPF4Q96M43 638 aa13.93□□□□□ -0.18
UBE2D3-227ENST00000508818 ANO8Q9HCE9 1232 aaPredicted RBP13.93□□□□□ -0.18
UBE2D3-227ENST00000508818 RGPD3A6NKT7 1758 aaPredicted RBP13.93□□□□□ -0.18
UBE2D3-227ENST00000508818 RGPD4Q7Z3J3 1758 aa13.93□□□□□ -0.18
UBE2D3-227ENST00000508818 CGNL1Q0VF96 1302 aa13.92□□□□□ -0.18
UBE2D3-227ENST00000508818 NSD3Q9BZ95 1437 aa13.92□□□□□ -0.18
UBE2D3-227ENST00000508818 TATP17735 454 aaPredicted RBP13.92□□□□□ -0.18
UBE2D3-227ENST00000508818 USHBP1Q8N6Y0 703 aa13.92□□□□□ -0.18
UBE2D3-227ENST00000508818 FAM208AQ9UK61 1670 aaKnown RBP13.91□□□□□ -0.18
UBE2D3-227ENST00000508818 PRIM1P49642 420 aaKnown RBP13.91□□□□□ -0.18
UBE2D3-227ENST00000508818 INSRP06213 1382 aa13.91□□□□□ -0.18
UBE2D3-227ENST00000508818 FLT4P35916 1363 aa13.91□□□□□ -0.18
UBE2D3-227ENST00000508818 ZBTB7AO95365 584 aa13.9□□□□□ -0.18
UBE2D3-227ENST00000508818 HSPA5P11021 654 aaKnown RBP13.9□□□□□ -0.18
UBE2D3-227ENST00000508818 KIF24Q5T7B8 1368 aa13.9□□□□□ -0.18
UBE2D3-227ENST00000508818 NHSQ6T4R5 1651 aa13.89□□□□□ -0.19
UBE2D3-227ENST00000508818 ATF5Q9Y2D1 282 aaPredicted RBP13.89□□□□□ -0.19
UBE2D3-227ENST00000508818 EMILIN1Q9Y6C2 1016 aa13.89□□□□□ -0.19
UBE2D3-227ENST00000508818 KIF20BQ96Q89 1820 aa13.88□□□□□ -0.19
UBE2D3-227ENST00000508818 SLC27A3Q5K4L6 730 aa13.88□□□□□ -0.19
UBE2D3-227ENST00000508818 PDGFDQ9GZP0 370 aaPredicted RBP13.88□□□□□ -0.19
UBE2D3-227ENST00000508818 TNNT2P45379 298 aaPredicted RBP13.87□□□□□ -0.19
UBE2D3-227ENST00000508818 MEGF6O75095 1541 aa13.86□□□□□ -0.19
UBE2D3-227ENST00000508818 PANK3Q9H999 370 aa13.86□□□□□ -0.19
UBE2D3-227ENST00000508818 PCDH11XQ9BZA7 1347 aa13.86□□□□□ -0.19
UBE2D3-227ENST00000508818 PCDH11YQ9BZA8 1340 aa13.86□□□□□ -0.19
UBE2D3-227ENST00000508818 RGPD2P0DJD1 1756 aa13.86□□□□□ -0.19
UBE2D3-227ENST00000508818 BTAF1O14981 1849 aa13.85□□□□□ -0.19
UBE2D3-227ENST00000508818 MTFR1LQ9H019 292 aa13.85□□□□□ -0.19
UBE2D3-227ENST00000508818 WASHC2AQ641Q2 1341 aa13.85□□□□□ -0.19
UBE2D3-227ENST00000508818 HMGB2P26583 209 aaKnown RBP13.84□□□□□ -0.19
UBE2D3-227ENST00000508818 LRRC4BQ9NT99 713 aa13.84□□□□□ -0.19
UBE2D3-227ENST00000508818 TFCP2L1Q9NZI6 479 aa13.84□□□□□ -0.19
UBE2D3-227ENST00000508818 SPG7Q9UQ90 795 aa13.84□□□□□ -0.19
UBE2D3-227ENST00000508818 MYOM1P52179 1685 aa13.84□□□□□ -0.19
UBE2D3-227ENST00000508818 MPRIPQ6WCQ1 1025 aa13.83□□□□□ -0.2
UBE2D3-227ENST00000508818 POLKQ9UBT6 870 aa13.83□□□□□ -0.2
UBE2D3-227ENST00000508818 CCNL1Q9UK58 526 aaPredicted RBP13.83□□□□□ -0.2
UBE2D3-227ENST00000508818 PTGER2P43116 358 aa13.82□□□□□ -0.2
UBE2D3-227ENST00000508818 KCNQ4P56696 695 aa13.82□□□□□ -0.2
UBE2D3-227ENST00000508818 ZNF827Q17R98 1081 aa13.82□□□□□ -0.2
UBE2D3-227ENST00000508818 KNSTRNQ9Y448 316 aa13.82□□□□□ -0.2
UBE2D3-227ENST00000508818 CAPN15O75808 1086 aa13.81□□□□□ -0.2
UBE2D3-227ENST00000508818 MORC1Q86VD1 984 aa13.81□□□□□ -0.2
UBE2D3-227ENST00000508818 AKT1S1Q96B36 256 aa13.81□□□□□ -0.2
UBE2D3-227ENST00000508818 EYA1Q99502 592 aa13.81□□□□□ -0.2
UBE2D3-227ENST00000508818 CASZ1Q86V15 1759 aa13.81□□□□□ -0.2
UBE2D3-227ENST00000508818 CYP27B1O15528 508 aa13.8□□□□□ -0.2
UBE2D3-227ENST00000508818 POLD1P28340 1107 aa13.8□□□□□ -0.2
UBE2D3-227ENST00000508818 SLC16A10Q8TF71 515 aa13.8□□□□□ -0.2
UBE2D3-227ENST00000508818 ARXQ96QS3 562 aa13.8□□□□□ -0.2
UBE2D3-227ENST00000508818 SMARCC1Q92922 1105 aaPredicted RBP13.79□□□□□ -0.2
UBE2D3-227ENST00000508818 FHDC1Q9C0D6 1143 aaPredicted RBP13.79□□□□□ -0.2
UBE2D3-227ENST00000508818 DOT1LQ8TEK3 1739 aa13.78□□□□□ -0.2
UBE2D3-227ENST00000508818 MAP2P11137 1827 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-227ENST00000508818 EIF4A2Q14240 407 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-227ENST00000508818 KLHL34Q8N239 644 aa13.78□□□□□ -0.2
UBE2D3-227ENST00000508818 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.78□□□□□ -0.2
UBE2D3-227ENST00000508818 NSD2O96028 1365 aa13.78□□□□□ -0.2
UBE2D3-227ENST00000508818 YY1P25490 414 aa13.77□□□□□ -0.21
UBE2D3-227ENST00000508818 IFNL2Q8IZJ0 200 aa13.77□□□□□ -0.21
UBE2D3-227ENST00000508818 SYT17Q9BSW7 474 aa13.77□□□□□ -0.21
UBE2D3-227ENST00000508818 SPINK5Q9NQ38 1064 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-227ENST00000508818 SHANK3Q9BYB0 1731 aa13.76□□□□□ -0.21
UBE2D3-227ENST00000508818 PNPLA7Q6ZV29 1317 aa13.76□□□□□ -0.21
UBE2D3-227ENST00000508818 NKX1-1Q15270 411 aaPredicted RBP13.76□□□□□ -0.21
UBE2D3-227ENST00000508818 TMOD3Q9NYL9 352 aa13.76□□□□□ -0.21
UBE2D3-227ENST00000508818 PAPPAQ13219 1627 aa13.75□□□□□ -0.21
UBE2D3-227ENST00000508818 PALLDQ8WX93 1383 aa13.75□□□□□ -0.21
UBE2D3-227ENST00000508818 PLEKHO1Q53GL0 409 aaPredicted RBP13.75□□□□□ -0.21
UBE2D3-227ENST00000508818 SAMD1Q6SPF0 538 aaPredicted RBP13.75□□□□□ -0.21
UBE2D3-227ENST00000508818 PIGBQ92521 554 aa13.75□□□□□ -0.21
UBE2D3-227ENST00000508818 SGIP1Q9BQI5 828 aa13.75□□□□□ -0.21
UBE2D3-227ENST00000508818 PHKG2P15735 406 aa13.74□□□□□ -0.21
UBE2D3-227ENST00000508818 FLAD1Q8NFF5 587 aa13.74□□□□□ -0.21
UBE2D3-227ENST00000508818 AK7Q96M32 723 aa13.73□□□□□ -0.21
UBE2D3-227ENST00000508818 LY75O60449 1722 aa13.73□□□□□ -0.21
UBE2D3-227ENST00000508818 ANKRD26Q9UPS8 1709 aa13.73□□□□□ -0.21
UBE2D3-227ENST00000508818 NCAPD2Q15021 1401 aa13.73□□□□□ -0.21
UBE2D3-227ENST00000508818 KIF7Q2M1P5 1343 aa13.72□□□□□ -0.21
UBE2D3-227ENST00000508818 HSP90AB1P08238 724 aaKnown RBP13.72□□□□□ -0.21
UBE2D3-227ENST00000508818 AMOTQ4VCS5 1084 aa13.72□□□□□ -0.21
UBE2D3-227ENST00000508818 COL23A1Q86Y22 540 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-227ENST00000508818 IGSF1Q8N6C5 1336 aa13.71□□□□□ -0.21
UBE2D3-227ENST00000508818 GPR162Q16538 588 aa13.71□□□□□ -0.21
UBE2D3-227ENST00000508818 LOC102724428A0A0B4J2F2 783 aa13.7□□□□□ -0.22
UBE2D3-227ENST00000508818 DSG3P32926 999 aa13.7□□□□□ -0.22
UBE2D3-227ENST00000508818 SIK1P57059 783 aa13.7□□□□□ -0.22
UBE2D3-227ENST00000508818 C1orf141Q5JVX7 400 aa13.7□□□□□ -0.22
UBE2D3-227ENST00000508818 ZNF530Q6P9A1 599 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-227ENST00000508818 PELP1Q8IZL8 1130 aaKnown RBP13.7□□□□□ -0.22
UBE2D3-227ENST00000508818 PKD1L3Q7Z443 1732 aa13.7□□□□□ -0.22
UBE2D3-227ENST00000508818 ERVV-2B6SEH9 535 aa13.69□□□□□ -0.22
UBE2D3-227ENST00000508818 ATP6V1AP38606 617 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms