RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 DAXXQ9UER7 740 aaPredicted RBP14.71□□□□□ -0.05
PRPF40B-203ENST00000508736 RWDD1Q9H446 243 aaPredicted RBP14.7□□□□□ -0.06
PRPF40B-203ENST00000508736 TRPM3Q9HCF6 1732 aaPredicted RBP14.7□□□□□ -0.06
PRPF40B-203ENST00000508736 LTN1O94822 1766 aa14.7□□□□□ -0.06
PRPF40B-203ENST00000508736 IPO8O15397 1037 aaKnown RBP14.69□□□□□ -0.06
PRPF40B-203ENST00000508736 RLBP1P12271 317 aa14.69□□□□□ -0.06
PRPF40B-203ENST00000508736 DZIP1LQ8IYY4 767 aaKnown RBP14.69□□□□□ -0.06
PRPF40B-203ENST00000508736 IP6K1Q92551 441 aa14.69□□□□□ -0.06
PRPF40B-203ENST00000508736 MBIPQ9NS73 344 aa14.69□□□□□ -0.06
PRPF40B-203ENST00000508736 HTATSF1O43719 755 aaKnown RBP14.69□□□□□ -0.06
PRPF40B-203ENST00000508736 VAMP4O75379 141 aa14.69□□□□□ -0.06
PRPF40B-203ENST00000508736 NUTM2GQ5VZR2 741 aa14.69□□□□□ -0.06
PRPF40B-203ENST00000508736 LMOD2Q6P5Q4 547 aa14.69□□□□□ -0.06
PRPF40B-203ENST00000508736 ATF7IPQ6VMQ6 1270 aa14.69□□□□□ -0.06
PRPF40B-203ENST00000508736 GAS2L2Q8NHY3 880 aa14.69□□□□□ -0.06
PRPF40B-203ENST00000508736 THUMPD2Q9BTF0 503 aaKnown RBP14.69□□□□□ -0.06
PRPF40B-203ENST00000508736 ROBO1Q9Y6N7 1651 aa14.68□□□□□ -0.06
PRPF40B-203ENST00000508736 HAP1P54257 671 aaPredicted RBP14.68□□□□□ -0.06
PRPF40B-203ENST00000508736 USP19O94966 1318 aa14.68□□□□□ -0.06
PRPF40B-203ENST00000508736 ARHGAP45Q92619 1136 aa14.67□□□□□ -0.06
PRPF40B-203ENST00000508736 LAS1LQ9Y4W2 734 aaKnown RBP14.67□□□□□ -0.06
PRPF40B-203ENST00000508736 FAM83GA6ND36 823 aa14.67□□□□□ -0.06
PRPF40B-203ENST00000508736 CHL1O00533 1208 aa14.67□□□□□ -0.06
PRPF40B-203ENST00000508736 TRIM27P14373 513 aa14.67□□□□□ -0.06
PRPF40B-203ENST00000508736 USP35Q9P2H5 1018 aa14.66□□□□□ -0.06
PRPF40B-203ENST00000508736 DDX19BQ9UMR2 479 aa14.66□□□□□ -0.06
PRPF40B-203ENST00000508736 KIAA0232Q92628 1395 aa14.66□□□□□ -0.06
PRPF40B-203ENST00000508736 SOS2Q07890 1332 aaPredicted RBP14.66□□□□□ -0.06
PRPF40B-203ENST00000508736 CRB1P82279 1406 aa14.66□□□□□ -0.06
PRPF40B-203ENST00000508736 PLEKHG5O94827 1062 aa14.65□□□□□ -0.06
PRPF40B-203ENST00000508736 MTHFSDQ2M296 383 aaKnown RBP14.65□□□□□ -0.06
PRPF40B-203ENST00000508736 NOB1Q9ULX3 412 aaKnown RBP14.65□□□□□ -0.06
PRPF40B-203ENST00000508736 TNNQ9UQP3 1299 aa14.65□□□□□ -0.06
PRPF40B-203ENST00000508736 PCDHB15Q9Y5E8 787 aa14.65□□□□□ -0.06
PRPF40B-203ENST00000508736 TWISTNBQ3B726 338 aaPredicted RBP14.65□□□□□ -0.06
PRPF40B-203ENST00000508736 ALS2Q96Q42 1657 aa14.64□□□□□ -0.07
PRPF40B-203ENST00000508736 DCTN1Q14203 1278 aa14.64□□□□□ -0.07
PRPF40B-203ENST00000508736 MRPL50Q8N5N7 158 aaKnown RBP14.64□□□□□ -0.07
PRPF40B-203ENST00000508736 LRRC37A3O60309 1634 aa14.64□□□□□ -0.07
PRPF40B-203ENST00000508736 PXDNQ92626 1479 aa14.64□□□□□ -0.07
PRPF40B-203ENST00000508736 GCP02774 474 aa14.63□□□□□ -0.07
PRPF40B-203ENST00000508736 ARHGEF25Q86VW2 580 aa14.63□□□□□ -0.07
PRPF40B-203ENST00000508736 RTF1Q92541 710 aaKnown RBP14.63□□□□□ -0.07
PRPF40B-203ENST00000508736 DEKP35659 375 aaKnown RBP14.63□□□□□ -0.07
PRPF40B-203ENST00000508736 TSPYL6Q8N831 410 aa14.63□□□□□ -0.07
PRPF40B-203ENST00000508736 LRRC59Q96AG4 307 aaKnown RBP14.63□□□□□ -0.07
PRPF40B-203ENST00000508736 NCAPD2Q15021 1401 aa14.63□□□□□ -0.07
PRPF40B-203ENST00000508736 SPATA31A3Q5VYP0 1347 aa14.62□□□□□ -0.07
PRPF40B-203ENST00000508736 MCM10Q7L590 875 aa14.62□□□□□ -0.07
PRPF40B-203ENST00000508736 ITPRIPQ8IWB1 547 aa14.62□□□□□ -0.07
PRPF40B-203ENST00000508736 C8orf58Q8NAV2 365 aa14.62□□□□□ -0.07
PRPF40B-203ENST00000508736 CHMP4BQ9H444 224 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-203ENST00000508736 BABAM1Q9NWV8 329 aa14.61□□□□□ -0.07
PRPF40B-203ENST00000508736 PDZRN3Q9UPQ7 1066 aa14.61□□□□□ -0.07
PRPF40B-203ENST00000508736 NHSL1Q5SYE7 1610 aa14.61□□□□□ -0.07
PRPF40B-203ENST00000508736 GNAT3A8MTJ3 354 aa14.61□□□□□ -0.07
PRPF40B-203ENST00000508736 HDAC1Q13547 482 aaPredicted RBP14.61□□□□□ -0.07
PRPF40B-203ENST00000508736 UPF2Q9HAU5 1272 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-203ENST00000508736 HSPA1LP34931 641 aa14.6□□□□□ -0.07
PRPF40B-203ENST00000508736 AHDC1Q5TGY3 1603 aaPredicted RBP14.6□□□□□ -0.07
PRPF40B-203ENST00000508736 MAP3K5Q99683 1374 aa14.6□□□□□ -0.07
PRPF40B-203ENST00000508736 CAMTA1Q9Y6Y1 1673 aa14.6□□□□□ -0.07
PRPF40B-203ENST00000508736 TNS3Q68CZ2 1445 aa14.59□□□□□ -0.07
PRPF40B-203ENST00000508736 TMEM57Q8N5G2 664 aa14.59□□□□□ -0.07
PRPF40B-203ENST00000508736 PHLPP1O60346 1717 aa14.59□□□□□ -0.07
PRPF40B-203ENST00000508736 SOS1Q07889 1333 aaPredicted RBP14.59□□□□□ -0.07
PRPF40B-203ENST00000508736 NBPF6Q5VWK0 638 aa14.58□□□□□ -0.08
PRPF40B-203ENST00000508736 CABLES1Q8TDN4 633 aa14.58□□□□□ -0.08
PRPF40B-203ENST00000508736 LTV1Q96GA3 475 aaPredicted RBP14.58□□□□□ -0.08
PRPF40B-203ENST00000508736 NBPF4Q96M43 638 aa14.58□□□□□ -0.08
PRPF40B-203ENST00000508736 API5Q9BZZ5 524 aaKnown RBP14.58□□□□□ -0.08
PRPF40B-203ENST00000508736 ZBTB40Q9NUA8 1239 aa14.58□□□□□ -0.08
PRPF40B-203ENST00000508736 ABCC4O15439 1325 aa14.58□□□□□ -0.08
PRPF40B-203ENST00000508736 ABCC6O95255 1503 aa14.58□□□□□ -0.08
PRPF40B-203ENST00000508736 MED1Q15648 1581 aaPredicted RBP14.58□□□□□ -0.08
PRPF40B-203ENST00000508736 FBXO41Q8TF61 875 aa14.57□□□□□ -0.08
PRPF40B-203ENST00000508736 ELL2O00472 640 aaPredicted RBP14.57□□□□□ -0.08
PRPF40B-203ENST00000508736 BECN1Q14457 450 aa14.57□□□□□ -0.08
PRPF40B-203ENST00000508736 TSPYL4Q9UJ04 414 aa14.56□□□□□ -0.08
PRPF40B-203ENST00000508736 CEMIPQ8WUJ3 1361 aa14.55□□□□□ -0.08
PRPF40B-203ENST00000508736 PLEKHG2Q9H7P9 1386 aa14.55□□□□□ -0.08
PRPF40B-203ENST00000508736 PTPRCP08575 1304 aa14.55□□□□□ -0.08
PRPF40B-203ENST00000508736 AMOTQ4VCS5 1084 aa14.55□□□□□ -0.08
PRPF40B-203ENST00000508736 LMO7Q8WWI1 1683 aa14.54□□□□□ -0.08
PRPF40B-203ENST00000508736 COL16A1Q07092 1604 aaPredicted RBP14.54□□□□□ -0.08
PRPF40B-203ENST00000508736 IL17REQ8NFR9 667 aa14.54□□□□□ -0.08
PRPF40B-203ENST00000508736 ANKRD24Q8TF21 1146 aa14.54□□□□□ -0.08
PRPF40B-203ENST00000508736 OVOS2A0A0G2JMS6 1433 aa14.54□□□□□ -0.08
PRPF40B-203ENST00000508736 ZBTB7BO15156 539 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-203ENST00000508736 TAF7Q15545 349 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-203ENST00000508736 SMC5Q8IY18 1101 aa14.53□□□□□ -0.08
PRPF40B-203ENST00000508736 USHBP1Q8N6Y0 703 aa14.53□□□□□ -0.08
PRPF40B-203ENST00000508736 ZBTB7CA1YPR0 619 aa14.52□□□□□ -0.08
PRPF40B-203ENST00000508736 PLEKHO1Q53GL0 409 aaPredicted RBP14.52□□□□□ -0.08
PRPF40B-203ENST00000508736 RGPD2P0DJD1 1756 aa14.52□□□□□ -0.08
PRPF40B-203ENST00000508736 CRYBG1Q9Y4K1 1723 aa14.52□□□□□ -0.08
PRPF40B-203ENST00000508736 ERBB3P21860 1342 aa14.52□□□□□ -0.09
PRPF40B-203ENST00000508736 NUTM2BA6NNL0 878 aaPredicted RBP14.52□□□□□ -0.09
PRPF40B-203ENST00000508736 NUTM2EB1AL46 878 aaPredicted RBP14.52□□□□□ -0.09
PRPF40B-203ENST00000508736 SLC4A3P48751 1232 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms