RNA–Protein interactions for RNA: ENST00000508639.5

SIL1-210, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-210ENST00000508639 MTFR1LQ9H019 292 aa14.8□□□□□ -0.04
SIL1-210ENST00000508639 USP47Q96K76 1375 aa14.8□□□□□ -0.04
SIL1-210ENST00000508639 LY75O60449 1722 aa14.8□□□□□ -0.04
SIL1-210ENST00000508639 HSP90AB2PQ58FF8 381 aa14.79□□□□□ -0.04
SIL1-210ENST00000508639 ZCRB1Q8TBF4 217 aaKnown RBP14.79□□□□□ -0.04
SIL1-210ENST00000508639 DOT1LQ8TEK3 1739 aa14.79□□□□□ -0.04
SIL1-210ENST00000508639 PNPLA7Q6ZV29 1317 aa14.78□□□□□ -0.04
SIL1-210ENST00000508639 AMPHP49418 695 aa14.78□□□□□ -0.04
SIL1-210ENST00000508639 TRIM26Q12899 539 aaPredicted RBP14.78□□□□□ -0.04
SIL1-210ENST00000508639 QSER1Q2KHR3 1735 aa14.78□□□□□ -0.04
SIL1-210ENST00000508639 GOLGB1Q14789 3259 aaKnown RBP14.76□□□□□ -0.05
SIL1-210ENST00000508639 TMF1P82094 1093 aa14.75□□□□□ -0.05
SIL1-210ENST00000508639 EMILIN1Q9Y6C2 1016 aa14.75□□□□□ -0.05
SIL1-210ENST00000508639 KIF20BQ96Q89 1820 aa14.75□□□□□ -0.05
SIL1-210ENST00000508639 RTL1A6NKG5 1358 aa14.74□□□□□ -0.05
SIL1-210ENST00000508639 INSRP06213 1382 aa14.74□□□□□ -0.05
SIL1-210ENST00000508639 CYP27B1O15528 508 aa14.74□□□□□ -0.05
SIL1-210ENST00000508639 SLC27A3Q5K4L6 730 aa14.74□□□□□ -0.05
SIL1-210ENST00000508639 ARXQ96QS3 562 aa14.74□□□□□ -0.05
SIL1-210ENST00000508639 AMIGO3Q86WK7 504 aa14.73□□□□□ -0.05
SIL1-210ENST00000508639 SYTL4Q96C24 671 aaPredicted RBP14.73□□□□□ -0.05
SIL1-210ENST00000508639 MAP3K5Q99683 1374 aa14.73□□□□□ -0.05
SIL1-210ENST00000508639 TOGARAM1Q9Y4F4 1720 aa14.72□□□□□ -0.05
SIL1-210ENST00000508639 SLC24A1O60721 1099 aa14.72□□□□□ -0.05
SIL1-210ENST00000508639 COL23A1Q86Y22 540 aaPredicted RBP14.72□□□□□ -0.05
SIL1-210ENST00000508639 NCAPD2Q15021 1401 aa14.72□□□□□ -0.05
SIL1-210ENST00000508639 MAP2P11137 1827 aaKnown RBP14.71□□□□□ -0.05
SIL1-210ENST00000508639 CHD4Q14839 1912 aa14.71□□□□□ -0.05
SIL1-210ENST00000508639 ITGB4P16144 1822 aa14.71□□□□□ -0.06
SIL1-210ENST00000508639 SMIM5Q71RC9 77 aa14.7□□□□□ -0.06
SIL1-210ENST00000508639 ZNF784Q8NCA9 323 aaPredicted RBP14.7□□□□□ -0.06
SIL1-210ENST00000508639 TAF1LQ8IZX4 1826 aa14.7□□□□□ -0.06
SIL1-210ENST00000508639 ANKRD26Q9UPS8 1709 aa14.69□□□□□ -0.06
SIL1-210ENST00000508639 NSD3Q9BZ95 1437 aa14.69□□□□□ -0.06
SIL1-210ENST00000508639 NLGN2Q8NFZ4 835 aa14.69□□□□□ -0.06
SIL1-210ENST00000508639 SLC16A10Q8TF71 515 aa14.69□□□□□ -0.06
SIL1-210ENST00000508639 FLT4P35916 1363 aa14.69□□□□□ -0.06
SIL1-210ENST00000508639 TFCP2L1Q9NZI6 479 aa14.68□□□□□ -0.06
SIL1-210ENST00000508639 CCNL1Q9UK58 526 aaPredicted RBP14.68□□□□□ -0.06
SIL1-210ENST00000508639 PKD1L3Q7Z443 1732 aa14.68□□□□□ -0.06
SIL1-210ENST00000508639 CGNL1Q0VF96 1302 aa14.67□□□□□ -0.06
SIL1-210ENST00000508639 TATP17735 454 aaPredicted RBP14.67□□□□□ -0.06
SIL1-210ENST00000508639 EYA1Q99502 592 aa14.67□□□□□ -0.06
SIL1-210ENST00000508639 POLKQ9UBT6 870 aa14.67□□□□□ -0.06
SIL1-210ENST00000508639 KIF24Q5T7B8 1368 aa14.67□□□□□ -0.06
SIL1-210ENST00000508639 NKX1-1Q15270 411 aaPredicted RBP14.66□□□□□ -0.06
SIL1-210ENST00000508639 RAPGEF4Q8WZA2 1011 aa14.66□□□□□ -0.06
SIL1-210ENST00000508639 PIGBQ92521 554 aa14.66□□□□□ -0.06
SIL1-210ENST00000508639 WASHC2AQ641Q2 1341 aa14.66□□□□□ -0.06
SIL1-210ENST00000508639 C5P01031 1676 aa14.65□□□□□ -0.06
SIL1-210ENST00000508639 MPRIPQ6WCQ1 1025 aa14.64□□□□□ -0.07
SIL1-210ENST00000508639 TIMELESSQ9UNS1 1208 aa14.64□□□□□ -0.07
SIL1-210ENST00000508639 PCDH11XQ9BZA7 1347 aa14.64□□□□□ -0.07
SIL1-210ENST00000508639 PCDH11YQ9BZA8 1340 aa14.64□□□□□ -0.07
SIL1-210ENST00000508639 PALLDQ8WX93 1383 aa14.63□□□□□ -0.07
SIL1-210ENST00000508639 DCAF8L1A6NGE4 600 aa14.63□□□□□ -0.07
SIL1-210ENST00000508639 YBX3P16989 372 aaKnown RBP eCLIP14.63□□□□□ -0.071e-6■■■■□ 20.7
SIL1-210ENST00000508639 CDCA8Q53HL2 280 aa14.63□□□□□ -0.07
SIL1-210ENST00000508639 MSL1Q68DK7 614 aa14.63□□□□□ -0.07
SIL1-210ENST00000508639 UBR3Q6ZT12 1888 aa14.62□□□□□ -0.07
SIL1-210ENST00000508639 SMG6Q86US8 1419 aaKnown RBP14.61□□□□□ -0.07
SIL1-210ENST00000508639 PPM1GO15355 546 aaPredicted RBP14.61□□□□□ -0.07
SIL1-210ENST00000508639 EIF4A2Q14240 407 aaKnown RBP14.61□□□□□ -0.07
SIL1-210ENST00000508639 C4BP0C0L5 1744 aa14.61□□□□□ -0.07
SIL1-210ENST00000508639 HSPA5P11021 654 aaKnown RBP14.6□□□□□ -0.07
SIL1-210ENST00000508639 ITPK1Q13572 414 aa14.6□□□□□ -0.07
SIL1-210ENST00000508639 LINC00116Q8NCU8 138 aa14.6□□□□□ -0.07
SIL1-210ENST00000508639 SLC4A9Q96Q91 983 aa14.6□□□□□ -0.07
SIL1-210ENST00000508639 PCGF6Q9BYE7 350 aa14.6□□□□□ -0.07
SIL1-210ENST00000508639 ASAP1Q9ULH1 1129 aa14.6□□□□□ -0.07
SIL1-210ENST00000508639 POLD1P28340 1107 aa14.59□□□□□ -0.07
SIL1-210ENST00000508639 GPR162Q16538 588 aa14.59□□□□□ -0.07
SIL1-210ENST00000508639 KLHL34Q8N239 644 aa14.59□□□□□ -0.07
SIL1-210ENST00000508639 PHKG2P15735 406 aa14.58□□□□□ -0.08
SIL1-210ENST00000508639 TNNT2P45379 298 aaPredicted RBP14.58□□□□□ -0.08
SIL1-210ENST00000508639 PANK3Q9H999 370 aa14.58□□□□□ -0.08
SIL1-210ENST00000508639 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.58□□□□□ -0.08
SIL1-210ENST00000508639 CLSPNQ9HAW4 1339 aa14.58□□□□□ -0.08
SIL1-210ENST00000508639 ATG3Q9NT62 314 aa14.57□□□□□ -0.08
SIL1-210ENST00000508639 LOC102724428A0A0B4J2F2 783 aa14.56□□□□□ -0.08
SIL1-210ENST00000508639 MSH5O43196 834 aa14.56□□□□□ -0.08
SIL1-210ENST00000508639 SIK1P57059 783 aa14.56□□□□□ -0.08
SIL1-210ENST00000508639 SPG7Q9UQ90 795 aa14.55□□□□□ -0.08
SIL1-210ENST00000508639 IGSF1Q8N6C5 1336 aa14.55□□□□□ -0.08
SIL1-210ENST00000508639 MYH14Q7Z406 1995 aaKnown RBP14.54□□□□□ -0.08
SIL1-210ENST00000508639 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.54□□□□□ -0.08
SIL1-210ENST00000508639 SMARCC1Q92922 1105 aaPredicted RBP14.54□□□□□ -0.08
SIL1-210ENST00000508639 POLR3GLQ9BT43 218 aa14.54□□□□□ -0.08
SIL1-210ENST00000508639 KDRP35968 1356 aa14.53□□□□□ -0.08
SIL1-210ENST00000508639 AEBP1Q8IUX7 1158 aa14.53□□□□□ -0.08
SIL1-210ENST00000508639 IFNL2Q8IZJ0 200 aa14.53□□□□□ -0.08
SIL1-210ENST00000508639 PELP1Q8IZL8 1130 aaKnown RBP14.53□□□□□ -0.08
SIL1-210ENST00000508639 KDM6AO15550 1401 aaPredicted RBP14.52□□□□□ -0.08
SIL1-210ENST00000508639 PHF14O94880 888 aa14.52□□□□□ -0.09
SIL1-210ENST00000508639 C1QTNF8P60827 252 aa14.52□□□□□ -0.09
SIL1-210ENST00000508639 EIF4G2P78344 907 aaKnown RBP eCLIP14.52□□□□□ -0.095e-8■■■□□ 18.8
SIL1-210ENST00000508639 CD2APQ9Y5K6 639 aa14.52□□□□□ -0.09
SIL1-210ENST00000508639 FLAD1Q8NFF5 587 aa14.51□□□□□ -0.09
SIL1-210ENST00000508639 TMOD3Q9NYL9 352 aa14.51□□□□□ -0.09
SIL1-210ENST00000508639 KIAA1551Q9HCM1 1747 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms