RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 TCOF1Q13428 1488 aaKnown RBP8.33□□□□□ -1.08
HMGB1P44-201ENST00000508597 C4orf48Q5BLP8 95 aa8.33□□□□□ -1.08
HMGB1P44-201ENST00000508597 C14orf37Q86TY3 774 aa8.33□□□□□ -1.08
HMGB1P44-201ENST00000508597 MTMR14Q8NCE2 650 aa8.33□□□□□ -1.08
HMGB1P44-201ENST00000508597 FOXJ1Q92949 421 aa8.33□□□□□ -1.08
HMGB1P44-201ENST00000508597 GJD4Q96KN9 370 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P44-201ENST00000508597 SCAPERQ9BY12 1400 aa8.33□□□□□ -1.08
HMGB1P44-201ENST00000508597 ZNF777Q9ULD5 760 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P44-201ENST00000508597 ABCC1P33527 1531 aa8.33□□□□□ -1.08
HMGB1P44-201ENST00000508597 KDM6BO15054 1643 aa8.32□□□□□ -1.08
HMGB1P44-201ENST00000508597 SAMD9LQ8IVG5 1584 aa8.32□□□□□ -1.08
HMGB1P44-201ENST00000508597 RC3H1Q5TC82 1133 aaKnown RBP8.32□□□□□ -1.08
HMGB1P44-201ENST00000508597 PTPN23Q9H3S7 1636 aa8.32□□□□□ -1.08
HMGB1P44-201ENST00000508597 CAMSAP2Q08AD1 1489 aa8.32□□□□□ -1.08
HMGB1P44-201ENST00000508597 ZNF518AQ6AHZ1 1483 aa8.32□□□□□ -1.08
HMGB1P44-201ENST00000508597 MAGI2Q86UL8 1455 aa8.32□□□□□ -1.08
HMGB1P44-201ENST00000508597 ARHGEF5Q12774 1597 aa8.31□□□□□ -1.08
HMGB1P44-201ENST00000508597 RRBP1Q9P2E9 1410 aaKnown RBP8.31□□□□□ -1.08
HMGB1P44-201ENST00000508597 ZNF511Q8NB15 262 aa8.31□□□□□ -1.08
HMGB1P44-201ENST00000508597 MRGPRX2Q96LB1 330 aa8.31□□□□□ -1.08
HMGB1P44-201ENST00000508597 MBD5Q9P267 1494 aa8.31□□□□□ -1.08
HMGB1P44-201ENST00000508597 POGZQ7Z3K3 1410 aa8.3□□□□□ -1.08
HMGB1P44-201ENST00000508597 RICTORQ6R327 1708 aa8.3□□□□□ -1.08
HMGB1P44-201ENST00000508597 GFRA3O60609 400 aa8.3□□□□□ -1.08
HMGB1P44-201ENST00000508597 GPR37L1O60883 481 aa8.3□□□□□ -1.08
HMGB1P44-201ENST00000508597 TSPY4P0CV99 314 aa8.3□□□□□ -1.08
HMGB1P44-201ENST00000508597 TSPY10P0CW01 314 aa8.3□□□□□ -1.08
HMGB1P44-201ENST00000508597 PPARGC1BQ86YN6 1023 aaKnown RBP8.3□□□□□ -1.08
HMGB1P44-201ENST00000508597 OCSTAMPQ9BR26 566 aa8.3□□□□□ -1.08
HMGB1P44-201ENST00000508597 PDZRN3Q9UPQ7 1066 aa8.3□□□□□ -1.08
HMGB1P44-201ENST00000508597 ZMYM4Q5VZL5 1548 aa8.29□□□□□ -1.08
HMGB1P44-201ENST00000508597 SYCP2Q9BX26 1530 aa8.29□□□□□ -1.08
HMGB1P44-201ENST00000508597 HNRNPMP52272 730 aaKnown RBP eCLIP8.29□□□□□ -1.08
HMGB1P44-201ENST00000508597 BANK1Q8NDB2 785 aa8.29□□□□□ -1.08
HMGB1P44-201ENST00000508597 CCDC141Q6ZP82 1450 aa8.29□□□□□ -1.08
HMGB1P44-201ENST00000508597 MLH3Q9UHC1 1453 aa8.29□□□□□ -1.08
HMGB1P44-201ENST00000508597 KDM5CP41229 1560 aa8.29□□□□□ -1.08
HMGB1P44-201ENST00000508597 ARHGEF12Q9NZN5 1544 aa8.29□□□□□ -1.08
HMGB1P44-201ENST00000508597 RTEL1-TNFRSF6BF6WH68 1400 aa8.29□□□□□ -1.08
HMGB1P44-201ENST00000508597 ZNF644Q9H582 1327 aaPredicted RBP8.29□□□□□ -1.08
HMGB1P44-201ENST00000508597 COL17A1Q9UMD9 1497 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P44-201ENST00000508597 WNT7AO00755 349 aa8.28□□□□□ -1.08
HMGB1P44-201ENST00000508597 LCE2BO14633 110 aa8.28□□□□□ -1.08
HMGB1P44-201ENST00000508597 SIAH2O43255 324 aa8.28□□□□□ -1.08
HMGB1P44-201ENST00000508597 WNT7BP56706 349 aa8.28□□□□□ -1.08
HMGB1P44-201ENST00000508597 IRX2Q9BZI1 471 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P44-201ENST00000508597 FKBPLQ9UIM3 349 aa8.28□□□□□ -1.08
HMGB1P44-201ENST00000508597 TRAPPC8Q9Y2L5 1435 aa8.28□□□□□ -1.08
HMGB1P44-201ENST00000508597 SPAG9O60271 1321 aaKnown RBP8.28□□□□□ -1.08
HMGB1P44-201ENST00000508597 SHANK2Q9UPX8 1470 aa8.27□□□□□ -1.09
HMGB1P44-201ENST00000508597 RAPGEF3O95398 923 aa8.27□□□□□ -1.09
HMGB1P44-201ENST00000508597 FAM50AQ14320 339 aaKnown RBP8.27□□□□□ -1.09
HMGB1P44-201ENST00000508597 AFAP1Q8N556 730 aa8.27□□□□□ -1.09
HMGB1P44-201ENST00000508597 TOR4AQ9NXH8 423 aa8.27□□□□□ -1.09
HMGB1P44-201ENST00000508597 DNMT1P26358 1616 aaKnown RBP8.27□□□□□ -1.09
HMGB1P44-201ENST00000508597 MAST1Q9Y2H9 1570 aa8.27□□□□□ -1.09
HMGB1P44-201ENST00000508597 J3QL48 77 aa8.26□□□□□ -1.09
HMGB1P44-201ENST00000508597 PRR20EP86478 221 aa8.26□□□□□ -1.09
HMGB1P44-201ENST00000508597 PRR20CP86479 221 aa8.26□□□□□ -1.09
HMGB1P44-201ENST00000508597 PRR20DP86480 221 aa8.26□□□□□ -1.09
HMGB1P44-201ENST00000508597 PRR20BP86481 221 aa8.26□□□□□ -1.09
HMGB1P44-201ENST00000508597 PRR20AP86496 221 aa8.26□□□□□ -1.09
HMGB1P44-201ENST00000508597 SH3BP5LQ7L8J4 393 aa8.26□□□□□ -1.09
HMGB1P44-201ENST00000508597 ABCC5O15440 1437 aa8.26□□□□□ -1.09
HMGB1P44-201ENST00000508597 DAPK1P53355 1430 aa8.26□□□□□ -1.09
HMGB1P44-201ENST00000508597 FRMPD1Q5SYB0 1578 aa8.26□□□□□ -1.09
HMGB1P44-201ENST00000508597 HECW2Q9P2P5 1572 aa8.26□□□□□ -1.09
HMGB1P44-201ENST00000508597 SH3RF1Q7Z6J0 888 aa8.25□□□□□ -1.09
HMGB1P44-201ENST00000508597 CROCC2H7BZ55 1655 aa8.24□□□□□ -1.09
HMGB1P44-201ENST00000508597 C9orf84Q5VXU9 1444 aa8.24□□□□□ -1.09
HMGB1P44-201ENST00000508597 EHBP1Q8NDI1 1231 aa8.24□□□□□ -1.09
HMGB1P44-201ENST00000508597 ATP7AQ04656 1500 aa8.24□□□□□ -1.09
HMGB1P44-201ENST00000508597 ZFYVE16Q7Z3T8 1539 aa8.24□□□□□ -1.09
HMGB1P44-201ENST00000508597 ROCK1Q13464 1354 aa8.23□□□□□ -1.09
HMGB1P44-201ENST00000508597 ANKRD30AQ9BXX3 1397 aa8.23□□□□□ -1.09
HMGB1P44-201ENST00000508597 REREQ9P2R6 1566 aa8.23□□□□□ -1.09
HMGB1P44-201ENST00000508597 INO80Q9ULG1 1556 aaPredicted RBP8.23□□□□□ -1.09
HMGB1P44-201ENST00000508597 KIDINS220Q9ULH0 1771 aa8.23□□□□□ -1.09
HMGB1P44-201ENST00000508597 MCM6Q14566 821 aa8.23□□□□□ -1.09
HMGB1P44-201ENST00000508597 TBC1D2BQ9UPU7 963 aa8.23□□□□□ -1.09
HMGB1P44-201ENST00000508597 TLL2Q9Y6L7 1015 aa8.23□□□□□ -1.09
HMGB1P44-201ENST00000508597 ATP10AO60312 1499 aa8.23□□□□□ -1.09
HMGB1P44-201ENST00000508597 ADGRL2O95490 1459 aa8.23□□□□□ -1.09
HMGB1P44-201ENST00000508597 ACIN1Q9UKV3 1341 aaKnown RBP8.23□□□□□ -1.09
HMGB1P44-201ENST00000508597 PLXNC1O60486 1568 aa8.22□□□□□ -1.09
HMGB1P44-201ENST00000508597 ADGBQ8N7X0 1667 aa8.22□□□□□ -1.09
HMGB1P44-201ENST00000508597 NRG2O14511 850 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P44-201ENST00000508597 SMPD1P17405 629 aa8.22□□□□□ -1.09
HMGB1P44-201ENST00000508597 POM121Q96HA1 1249 aa8.22□□□□□ -1.09
HMGB1P44-201ENST00000508597 CARD14Q9BXL6 1004 aa8.22□□□□□ -1.09
HMGB1P44-201ENST00000508597 ARHGEF40Q8TER5 1519 aa8.22□□□□□ -1.09
HMGB1P44-201ENST00000508597 NCOA1Q15788 1441 aa8.21□□□□□ -1.09
HMGB1P44-201ENST00000508597 MAGEB6P1A0A0J9YX57 407 aa8.21□□□□□ -1.1
HMGB1P44-201ENST00000508597 FLIIQ13045 1269 aa8.21□□□□□ -1.1
HMGB1P44-201ENST00000508597 AGERQ15109 404 aa8.21□□□□□ -1.1
HMGB1P44-201ENST00000508597 PDXDC2PQ6P474 469 aa8.21□□□□□ -1.1
HMGB1P44-201ENST00000508597 CYP4X1Q8N118 509 aa8.21□□□□□ -1.1
HMGB1P44-201ENST00000508597 ARMC2Q8NEN0 867 aa8.21□□□□□ -1.1
HMGB1P44-201ENST00000508597 SNIP1Q8TAD8 396 aaKnown RBP8.21□□□□□ -1.1
HMGB1P44-201ENST00000508597 DHX29Q7Z478 1369 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms