RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CC2D2BQ6DHV5 1058 aa8.99□□□□□ -0.97
PDLIM5-211ENST00000508531 VWA5B2Q8N398 1253 aa8.99□□□□□ -0.97
PDLIM5-211ENST00000508531 COL25A1Q9BXS0 654 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-211ENST00000508531 MEN1O00255 615 aa8.98□□□□□ -0.97
PDLIM5-211ENST00000508531 SCTRP47872 440 aa8.98□□□□□ -0.97
PDLIM5-211ENST00000508531 PRICKLE2Q7Z3G6 844 aa8.98□□□□□ -0.97
PDLIM5-211ENST00000508531 PCDHB11Q9Y5F2 797 aa8.98□□□□□ -0.97
PDLIM5-211ENST00000508531 RHOQP17081 205 aa8.97□□□□□ -0.97
PDLIM5-211ENST00000508531 RNF144AP50876 292 aaPredicted RBP8.97□□□□□ -0.97
PDLIM5-211ENST00000508531 SV2AQ7L0J3 742 aa8.97□□□□□ -0.97
PDLIM5-211ENST00000508531 CCDC125Q86Z20 511 aa8.97□□□□□ -0.97
PDLIM5-211ENST00000508531 ZNF592Q92610 1267 aa8.97□□□□□ -0.97
PDLIM5-211ENST00000508531 TBC1D2BQ9UPU7 963 aa8.97□□□□□ -0.97
PDLIM5-211ENST00000508531 A0A1W2PRU2 124 aa8.96□□□□□ -0.98
PDLIM5-211ENST00000508531 RNFT1Q5M7Z0 435 aa8.96□□□□□ -0.98
PDLIM5-211ENST00000508531 CYP2U1Q7Z449 544 aa8.94□□□□□ -0.98
PDLIM5-211ENST00000508531 OSBPL3Q9H4L5 887 aa8.94□□□□□ -0.98
PDLIM5-211ENST00000508531 CUEDC1Q9NWM3 386 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-211ENST00000508531 GPC1P35052 558 aa8.93□□□□□ -0.98
PDLIM5-211ENST00000508531 NLRP3Q96P20 1036 aa8.93□□□□□ -0.98
PDLIM5-211ENST00000508531 ESF1Q9H501 851 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-211ENST00000508531 CEP126Q9P2H0 1117 aa8.93□□□□□ -0.98
PDLIM5-211ENST00000508531 TRAK2O60296 914 aa8.92□□□□□ -0.98
PDLIM5-211ENST00000508531 SLC27A3Q5K4L6 730 aa8.92□□□□□ -0.98
PDLIM5-211ENST00000508531 CCDC85AQ96PX6 553 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-211ENST00000508531 ARHGEF10LQ9HCE6 1279 aa8.92□□□□□ -0.98
PDLIM5-211ENST00000508531 PRKCSHP14314 528 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-211ENST00000508531 CDCA7Q9BWT1 371 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-211ENST00000508531 PRM3Q9NNZ6 103 aa8.91□□□□□ -0.98
PDLIM5-211ENST00000508531 RAB6BQ9NRW1 208 aa8.91□□□□□ -0.98
PDLIM5-211ENST00000508531 POU4F2Q12837 409 aa8.9□□□□□ -0.98
PDLIM5-211ENST00000508531 CLN3Q13286 438 aa8.9□□□□□ -0.98
PDLIM5-211ENST00000508531 IRF5Q13568 498 aa8.9□□□□□ -0.98
PDLIM5-211ENST00000508531 GRIP2Q9C0E4 1043 aa8.89□□□□□ -0.99
PDLIM5-211ENST00000508531 EIF4G2P78344 907 aaKnown RBP eCLIP8.88□□□□□ -0.99
PDLIM5-211ENST00000508531 ZNF385CQ66K41 422 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-211ENST00000508531 RIPOR1Q6ZS17 1223 aa8.88□□□□□ -0.99
PDLIM5-211ENST00000508531 SVOPQ8N4V2 548 aa8.88□□□□□ -0.99
PDLIM5-211ENST00000508531 WHAMMQ8TF30 809 aa8.88□□□□□ -0.99
PDLIM5-211ENST00000508531 MYCP01106 439 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-211ENST00000508531 VAC14Q08AM6 782 aa8.87□□□□□ -0.99
PDLIM5-211ENST00000508531 TSGA10IPQ3SY00 556 aa8.87□□□□□ -0.99
PDLIM5-211ENST00000508531 ZNF837Q96EG3 531 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-211ENST00000508531 GAS2L1Q99501 681 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-211ENST00000508531 GDPD2Q9HCC8 539 aa8.87□□□□□ -0.99
PDLIM5-211ENST00000508531 GNRH1P01148 92 aa8.86□□□□□ -0.99
PDLIM5-211ENST00000508531 IL2RAP01589 272 aa8.86□□□□□ -0.99
PDLIM5-211ENST00000508531 SLURP2P0DP57 97 aa8.86□□□□□ -0.99
PDLIM5-211ENST00000508531 ABL2P42684 1182 aa8.86□□□□□ -0.99
PDLIM5-211ENST00000508531 GAS6Q14393 721 aa8.86□□□□□ -0.99
PDLIM5-211ENST00000508531 NBPF10Q6P3W6 841 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-211ENST00000508531 TRIM22Q8IYM9 498 aa8.86□□□□□ -0.99
PDLIM5-211ENST00000508531 NBPF15Q8N660 670 aa8.86□□□□□ -0.99
PDLIM5-211ENST00000508531 CNKSR1Q969H4 720 aa8.86□□□□□ -0.99
PDLIM5-211ENST00000508531 DYRK1BQ9Y463 629 aa8.86□□□□□ -0.99
PDLIM5-211ENST00000508531 SPATA31C2B4DYI2 1134 aa8.85□□□□□ -0.99
PDLIM5-211ENST00000508531 GPR25O00155 361 aa8.85□□□□□ -0.99
PDLIM5-211ENST00000508531 DBN1Q16643 649 aa8.85□□□□□ -0.99
PDLIM5-211ENST00000508531 ADAMTS8Q9UP79 889 aa8.85□□□□□ -0.99
PDLIM5-211ENST00000508531 DOLKQ9UPQ8 538 aa8.85□□□□□ -0.99
PDLIM5-211ENST00000508531 WASLO00401 505 aaPredicted RBP8.84□□□□□ -0.99
PDLIM5-211ENST00000508531 ADAMTS2O95450 1211 aa8.84□□□□□ -0.99
PDLIM5-211ENST00000508531 SLFNL1Q499Z3 407 aa8.84□□□□□ -0.99
PDLIM5-211ENST00000508531 RNF135Q8IUD6 432 aa8.84□□□□□ -0.99
PDLIM5-211ENST00000508531 PHTF2Q8N3S3 785 aa8.84□□□□□ -0.99
PDLIM5-211ENST00000508531 ESYT1Q9BSJ8 1104 aa8.84□□□□□ -0.99
PDLIM5-211ENST00000508531 CENPCQ03188 943 aa8.83□□□□□ -1
PDLIM5-211ENST00000508531 OXLD1Q5BKU9 147 aa8.83□□□□□ -1
PDLIM5-211ENST00000508531 TAS1R3Q7RTX0 852 aa8.83□□□□□ -1
PDLIM5-211ENST00000508531 GMCL1Q96IK5 515 aa8.83□□□□□ -1
PDLIM5-211ENST00000508531 TIMMDC1Q9NPL8 285 aa8.83□□□□□ -1
PDLIM5-211ENST00000508531 STAU1O95793 577 aaKnown RBP8.82□□□□□ -1
PDLIM5-211ENST00000508531 SRSF11Q05519 484 aaKnown RBP8.82□□□□□ -1
PDLIM5-211ENST00000508531 KCNMA1Q12791 1236 aa8.82□□□□□ -1
PDLIM5-211ENST00000508531 GTPBP3Q969Y2 492 aaKnown RBP8.82□□□□□ -1
PDLIM5-211ENST00000508531 H7C1W4 665 aa8.81□□□□□ -1
PDLIM5-211ENST00000508531 PHKA2P46019 1235 aa8.81□□□□□ -1
PDLIM5-211ENST00000508531 MCM6Q14566 821 aa8.81□□□□□ -1
PDLIM5-211ENST00000508531 FOXR1Q6PIV2 292 aa8.81□□□□□ -1
PDLIM5-211ENST00000508531 LYPD4Q6UWN0 246 aa8.81□□□□□ -1
PDLIM5-211ENST00000508531 XAGE2Q96GT9 111 aa8.81□□□□□ -1
PDLIM5-211ENST00000508531 ZSCAN10Q96SZ4 725 aaPredicted RBP8.81□□□□□ -1
PDLIM5-211ENST00000508531 HRH3Q9Y5N1 445 aa8.81□□□□□ -1
PDLIM5-211ENST00000508531 ARHGEF15O94989 841 aa8.8□□□□□ -1
PDLIM5-211ENST00000508531 USP4Q13107 963 aa8.8□□□□□ -1
PDLIM5-211ENST00000508531 WDR44Q5JSH3 913 aa8.8□□□□□ -1
PDLIM5-211ENST00000508531 MBIPQ9NS73 344 aa8.8□□□□□ -1
PDLIM5-211ENST00000508531 F11P03951 625 aa8.79□□□□□ -1
PDLIM5-211ENST00000508531 GSK3AP49840 483 aa8.79□□□□□ -1
PDLIM5-211ENST00000508531 WASHC4Q2M389 1173 aa8.79□□□□□ -1
PDLIM5-211ENST00000508531 FHDC1Q9C0D6 1143 aaPredicted RBP8.79□□□□□ -1
PDLIM5-211ENST00000508531 NUCKS1Q9H1E3 243 aaKnown RBP8.79□□□□□ -1
PDLIM5-211ENST00000508531 ETNK1Q9HBU6 452 aa8.79□□□□□ -1
PDLIM5-211ENST00000508531 GPAMQ9HCL2 828 aa8.79□□□□□ -1
PDLIM5-211ENST00000508531 GTF2E1P29083 439 aaPredicted RBP8.78□□□□□ -1
PDLIM5-211ENST00000508531 ESCO1Q5FWF5 840 aa8.78□□□□□ -1
PDLIM5-211ENST00000508531 TMEM214Q6NUQ4 689 aaKnown RBP8.78□□□□□ -1
PDLIM5-211ENST00000508531 TRERF1Q96PN7 1200 aa8.78□□□□□ -1
PDLIM5-211ENST00000508531 CHIC2Q9UKJ5 165 aa8.78□□□□□ -1
PDLIM5-211ENST00000508531 IGF1RP08069 1367 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms