RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 INSRP06213 1382 aa22.53■■□□□ 1.2
LMNA-222ENST00000508500 COL24A1Q17RW2 1714 aa22.52■■□□□ 1.2
LMNA-222ENST00000508500 QSER1Q2KHR3 1735 aa22.52■■□□□ 1.2
LMNA-222ENST00000508500 EMILIN1Q9Y6C2 1016 aa22.52■■□□□ 1.2
LMNA-222ENST00000508500 FLT4P35916 1363 aa22.51■■□□□ 1.19
LMNA-222ENST00000508500 EIF4G2P78344 907 aaKnown RBP eCLIP22.51■■□□□ 1.19
LMNA-222ENST00000508500 SGIP1Q9BQI5 828 aa22.51■■□□□ 1.19
LMNA-222ENST00000508500 LY75O60449 1722 aa22.51■■□□□ 1.19
LMNA-222ENST00000508500 KIF24Q5T7B8 1368 aa22.5■■□□□ 1.19
LMNA-222ENST00000508500 SLC15A2Q16348 729 aa22.5■■□□□ 1.19
LMNA-222ENST00000508500 ZCRB1Q8TBF4 217 aaKnown RBP22.5■■□□□ 1.19
LMNA-222ENST00000508500 PPP1R1BQ9UD71 204 aaPredicted RBP22.5■■□□□ 1.19
LMNA-222ENST00000508500 POLR3GLQ9BT43 218 aa22.49■■□□□ 1.19
LMNA-222ENST00000508500 LRRC4BQ9NT99 713 aa22.48■■□□□ 1.19
LMNA-222ENST00000508500 NSD2O96028 1365 aa22.48■■□□□ 1.19
LMNA-222ENST00000508500 TUBGCP6Q96RT7 1819 aa22.47■■□□□ 1.19
LMNA-222ENST00000508500 ZBTB7AO95365 584 aa22.47■■□□□ 1.19
LMNA-222ENST00000508500 YY1P25490 414 aa22.47■■□□□ 1.19
LMNA-222ENST00000508500 PKD1L3Q7Z443 1732 aa22.47■■□□□ 1.19
LMNA-222ENST00000508500 ITGB4P16144 1822 aa22.47■■□□□ 1.19
LMNA-222ENST00000508500 SMG6Q86US8 1419 aaKnown RBP22.47■■□□□ 1.19
LMNA-222ENST00000508500 STK32BQ9NY57 414 aa22.46■■□□□ 1.19
LMNA-222ENST00000508500 PRIM1P49642 420 aaKnown RBP22.45■■□□□ 1.18
LMNA-222ENST00000508500 CGNL1Q0VF96 1302 aa22.45■■□□□ 1.18
LMNA-222ENST00000508500 NCAPD2Q15021 1401 aa22.45■■□□□ 1.18
LMNA-222ENST00000508500 TOGARAM1Q9Y4F4 1720 aa22.45■■□□□ 1.18
LMNA-222ENST00000508500 POLKQ9UBT6 870 aa22.43■■□□□ 1.18
LMNA-222ENST00000508500 CHD4Q14839 1912 aa22.43■■□□□ 1.18
LMNA-222ENST00000508500 WASHC2AQ641Q2 1341 aa22.42■■□□□ 1.18
LMNA-222ENST00000508500 TATP17735 454 aaPredicted RBP22.42■■□□□ 1.18
LMNA-222ENST00000508500 ZNF827Q17R98 1081 aa22.42■■□□□ 1.18
LMNA-222ENST00000508500 RAPGEF4Q8WZA2 1011 aa22.42■■□□□ 1.18
LMNA-222ENST00000508500 PANK3Q9H999 370 aa22.42■■□□□ 1.18
LMNA-222ENST00000508500 ATF5Q9Y2D1 282 aaPredicted RBP22.42■■□□□ 1.18
LMNA-222ENST00000508500 PPM1GO15355 546 aaPredicted RBP22.41■■□□□ 1.18
LMNA-222ENST00000508500 SYTL4Q96C24 671 aaPredicted RBP22.41■■□□□ 1.18
LMNA-222ENST00000508500 MTFR1LQ9H019 292 aa22.41■■□□□ 1.18
LMNA-222ENST00000508500 UTRNP46939 3433 aa22.4■■□□□ 1.18
LMNA-222ENST00000508500 TAF1LQ8IZX4 1826 aa22.39■■□□□ 1.17
LMNA-222ENST00000508500 KCNQ4P56696 695 aa22.39■■□□□ 1.17
LMNA-222ENST00000508500 MAP3K5Q99683 1374 aa22.38■■□□□ 1.17
LMNA-222ENST00000508500 CYP27B1O15528 508 aa22.38■■□□□ 1.17
LMNA-222ENST00000508500 AKT1S1Q96B36 256 aa22.38■■□□□ 1.17
LMNA-222ENST00000508500 EYA1Q99502 592 aa22.38■■□□□ 1.17
LMNA-222ENST00000508500 SYT17Q9BSW7 474 aa22.38■■□□□ 1.17
LMNA-222ENST00000508500 TNNT2P45379 298 aaPredicted RBP22.37■■□□□ 1.17
LMNA-222ENST00000508500 FHDC1Q9C0D6 1143 aaPredicted RBP22.37■■□□□ 1.17
LMNA-222ENST00000508500 SLC27A3Q5K4L6 730 aa22.36■■□□□ 1.17
LMNA-222ENST00000508500 PCDH11XQ9BZA7 1347 aa22.35■■□□□ 1.17
LMNA-222ENST00000508500 PCDH11YQ9BZA8 1340 aa22.35■■□□□ 1.17
LMNA-222ENST00000508500 C5P01031 1676 aa22.33■■□□□ 1.17
LMNA-222ENST00000508500 EIF4A2Q14240 407 aaKnown RBP22.33■■□□□ 1.17
LMNA-222ENST00000508500 DCAF8L1A6NGE4 600 aa22.31■■□□□ 1.16
LMNA-222ENST00000508500 PNPLA7Q6ZV29 1317 aa22.31■■□□□ 1.16
LMNA-222ENST00000508500 KIF7Q2M1P5 1343 aa22.3■■□□□ 1.16
LMNA-222ENST00000508500 NKX1-1Q15270 411 aaPredicted RBP22.29■■□□□ 1.16
LMNA-222ENST00000508500 ARXQ96QS3 562 aa22.29■■□□□ 1.16
LMNA-222ENST00000508500 MPRIPQ6WCQ1 1025 aa22.28■■□□□ 1.16
LMNA-222ENST00000508500 CCNL1Q9UK58 526 aaPredicted RBP22.28■■□□□ 1.16
LMNA-222ENST00000508500 SLC16A10Q8TF71 515 aa22.26■■□□□ 1.15
LMNA-222ENST00000508500 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.26■■□□□ 1.15
LMNA-222ENST00000508500 SPG7Q9UQ90 795 aa22.26■■□□□ 1.15
LMNA-222ENST00000508500 IGSF1Q8N6C5 1336 aa22.26■■□□□ 1.15
LMNA-222ENST00000508500 ZNF784Q8NCA9 323 aaPredicted RBP22.25■■□□□ 1.15
LMNA-222ENST00000508500 PALLDQ8WX93 1383 aa22.25■■□□□ 1.15
LMNA-222ENST00000508500 AMER1Q5JTC6 1135 aaPredicted RBP22.24■■□□□ 1.15
LMNA-222ENST00000508500 MORC1Q86VD1 984 aa22.24■■□□□ 1.15
LMNA-222ENST00000508500 PIGBQ92521 554 aa22.24■■□□□ 1.15
LMNA-222ENST00000508500 TFCP2L1Q9NZI6 479 aa22.24■■□□□ 1.15
LMNA-222ENST00000508500 UBR3Q6ZT12 1888 aa22.24■■□□□ 1.15
LMNA-222ENST00000508500 PHKG2P15735 406 aa22.23■■□□□ 1.15
LMNA-222ENST00000508500 KNSTRNQ9Y448 316 aa22.23■■□□□ 1.15
LMNA-222ENST00000508500 C4BP0C0L5 1744 aa22.23■■□□□ 1.15
LMNA-222ENST00000508500 GOLGB1Q14789 3259 aaKnown RBP22.22■■□□□ 1.15
LMNA-222ENST00000508500 PER1O15534 1290 aaPredicted RBP22.21■■□□□ 1.15
LMNA-222ENST00000508500 VIRMAQ69YN4 1812 aaKnown RBP22.2■■□□□ 1.14
LMNA-222ENST00000508500 COL23A1Q86Y22 540 aaPredicted RBP22.2■■□□□ 1.14
LMNA-222ENST00000508500 IFNL2Q8IZJ0 200 aa22.2■■□□□ 1.14
LMNA-222ENST00000508500 PLEKHG2Q9H7P9 1386 aa22.19■■□□□ 1.14
LMNA-222ENST00000508500 AEBP1Q8IUX7 1158 aa22.18■■□□□ 1.14
LMNA-222ENST00000508500 AMIGO3Q86WK7 504 aa22.17■■□□□ 1.14
LMNA-222ENST00000508500 SMARCC1Q92922 1105 aaPredicted RBP22.16■■□□□ 1.14
LMNA-222ENST00000508500 ASAP1Q9ULH1 1129 aa22.16■■□□□ 1.14
LMNA-222ENST00000508500 IL13P35225 146 aa22.15■■□□□ 1.14
LMNA-222ENST00000508500 SCN11AQ9UI33 1791 aa22.15■■□□□ 1.14
LMNA-222ENST00000508500 TMOD3Q9NYL9 352 aa22.14■■□□□ 1.13
LMNA-222ENST00000508500 KDM6AO15550 1401 aaPredicted RBP22.14■■□□□ 1.13
LMNA-222ENST00000508500 SMIM5Q71RC9 77 aa22.13■■□□□ 1.13
LMNA-222ENST00000508500 ATG3Q9NT62 314 aa22.13■■□□□ 1.13
LMNA-222ENST00000508500 KDRP35968 1356 aa22.12■■□□□ 1.13
LMNA-222ENST00000508500 ZNF831Q5JPB2 1677 aa22.12■■□□□ 1.13
LMNA-222ENST00000508500 LOC102724428A0A0B4J2F2 783 aa22.12■■□□□ 1.13
LMNA-222ENST00000508500 SIK1P57059 783 aa22.12■■□□□ 1.13
LMNA-222ENST00000508500 ITPK1Q13572 414 aa22.12■■□□□ 1.13
LMNA-222ENST00000508500 PLEKHO1Q53GL0 409 aaPredicted RBP22.12■■□□□ 1.13
LMNA-222ENST00000508500 LINC00116Q8NCU8 138 aa22.12■■□□□ 1.13
LMNA-222ENST00000508500 NLGN2Q8NFZ4 835 aa22.12■■□□□ 1.13
LMNA-222ENST00000508500 COL5A3P25940 1745 aaPredicted RBP22.11■■□□□ 1.13
LMNA-222ENST00000508500 MYH14Q7Z406 1995 aaKnown RBP22.11■■□□□ 1.13
LMNA-222ENST00000508500 POLD1P28340 1107 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms