RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 SYT17Q9BSW7 474 aa22.67■■□□□ 1.22
DDR1-263ENST00000508317 SBF2Q86WG5 1849 aa22.66■■□□□ 1.22
DDR1-263ENST00000508317 SGIP1Q9BQI5 828 aa22.66■■□□□ 1.22
DDR1-263ENST00000508317 POLR3GLQ9BT43 218 aa22.66■■□□□ 1.22
DDR1-263ENST00000508317 CEP350Q5VT06 3117 aa22.66■■□□□ 1.22
DDR1-263ENST00000508317 GOLGB1Q14789 3259 aaKnown RBP22.65■■□□□ 1.22
DDR1-263ENST00000508317 LTN1O94822 1766 aa22.64■■□□□ 1.22
DDR1-263ENST00000508317 PRIM1P49642 420 aaKnown RBP22.64■■□□□ 1.21
DDR1-263ENST00000508317 PPM1GO15355 546 aaPredicted RBP22.63■■□□□ 1.21
DDR1-263ENST00000508317 FBLN1P23142 703 aa22.63■■□□□ 1.21
DDR1-263ENST00000508317 POLD1P28340 1107 aa22.62■■□□□ 1.21
DDR1-263ENST00000508317 TFCP2L1Q9NZI6 479 aa22.62■■□□□ 1.21
DDR1-263ENST00000508317 FLT4P35916 1363 aa22.62■■□□□ 1.21
DDR1-263ENST00000508317 KIF24Q5T7B8 1368 aa22.62■■□□□ 1.21
DDR1-263ENST00000508317 SLC16A10Q8TF71 515 aa22.6■■□□□ 1.21
DDR1-263ENST00000508317 NHSQ6T4R5 1651 aa22.59■■□□□ 1.21
DDR1-263ENST00000508317 FAM208AQ9UK61 1670 aaKnown RBP22.59■■□□□ 1.21
DDR1-263ENST00000508317 NBPF6Q5VWK0 638 aa22.59■■□□□ 1.21
DDR1-263ENST00000508317 NBPF4Q96M43 638 aa22.59■■□□□ 1.21
DDR1-263ENST00000508317 INSRP06213 1382 aa22.59■■□□□ 1.21
DDR1-263ENST00000508317 PCDH11XQ9BZA7 1347 aa22.58■■□□□ 1.21
DDR1-263ENST00000508317 PCDH11YQ9BZA8 1340 aa22.58■■□□□ 1.21
DDR1-263ENST00000508317 USHBP1Q8N6Y0 703 aa22.58■■□□□ 1.21
DDR1-263ENST00000508317 ARXQ96QS3 562 aa22.58■■□□□ 1.21
DDR1-263ENST00000508317 MSH5O43196 834 aa22.57■■□□□ 1.2
DDR1-263ENST00000508317 HSP90AB2PQ58FF8 381 aa22.57■■□□□ 1.2
DDR1-263ENST00000508317 CCNL1Q9UK58 526 aaPredicted RBP22.57■■□□□ 1.2
DDR1-263ENST00000508317 NSD3Q9BZ95 1437 aa22.57■■□□□ 1.2
DDR1-263ENST00000508317 EIF4G2P78344 907 aaKnown RBP eCLIP22.55■■□□□ 1.2
DDR1-263ENST00000508317 KLHL34Q8N239 644 aa22.54■■□□□ 1.2
DDR1-263ENST00000508317 LRRC4BQ9NT99 713 aa22.54■■□□□ 1.2
DDR1-263ENST00000508317 SPG7Q9UQ90 795 aa22.54■■□□□ 1.2
DDR1-263ENST00000508317 CHD4Q14839 1912 aa22.53■■□□□ 1.2
DDR1-263ENST00000508317 ZNF827Q17R98 1081 aa22.52■■□□□ 1.2
DDR1-263ENST00000508317 CARD14Q9BXL6 1004 aa22.52■■□□□ 1.2
DDR1-263ENST00000508317 PAPPAQ13219 1627 aa22.51■■□□□ 1.19
DDR1-263ENST00000508317 SMARCC1Q92922 1105 aaPredicted RBP22.51■■□□□ 1.19
DDR1-263ENST00000508317 AKT1S1Q96B36 256 aa22.51■■□□□ 1.19
DDR1-263ENST00000508317 MAP3K5Q99683 1374 aa22.5■■□□□ 1.19
DDR1-263ENST00000508317 MPRIPQ6WCQ1 1025 aa22.5■■□□□ 1.19
DDR1-263ENST00000508317 EMILIN1Q9Y6C2 1016 aa22.5■■□□□ 1.19
DDR1-263ENST00000508317 MEGF6O75095 1541 aa22.5■■□□□ 1.19
DDR1-263ENST00000508317 KAT6BQ8WYB5 2073 aa22.5■■□□□ 1.19
DDR1-263ENST00000508317 FLAD1Q8NFF5 587 aa22.49■■□□□ 1.19
DDR1-263ENST00000508317 SHANK3Q9BYB0 1731 aa22.48■■□□□ 1.19
DDR1-263ENST00000508317 GPR162Q16538 588 aa22.48■■□□□ 1.19
DDR1-263ENST00000508317 BTAF1O14981 1849 aa22.47■■□□□ 1.19
DDR1-263ENST00000508317 GIGYF1O75420 1035 aaPredicted RBP22.46■■□□□ 1.19
DDR1-263ENST00000508317 TNNT2P45379 298 aaPredicted RBP22.46■■□□□ 1.19
DDR1-263ENST00000508317 KCNQ4P56696 695 aa22.46■■□□□ 1.19
DDR1-263ENST00000508317 WASHC2AQ641Q2 1341 aa22.46■■□□□ 1.19
DDR1-263ENST00000508317 PELP1Q8IZL8 1130 aaKnown RBP22.45■■□□□ 1.18
DDR1-263ENST00000508317 PNPLA7Q6ZV29 1317 aa22.45■■□□□ 1.18
DDR1-263ENST00000508317 AK7Q96M32 723 aa22.43■■□□□ 1.18
DDR1-263ENST00000508317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.43■■□□□ 1.18
DDR1-263ENST00000508317 PALLDQ8WX93 1383 aa22.42■■□□□ 1.18
DDR1-263ENST00000508317 TMOD3Q9NYL9 352 aa22.42■■□□□ 1.18
DDR1-263ENST00000508317 NSD2O96028 1365 aa22.41■■□□□ 1.18
DDR1-263ENST00000508317 HSPA5P11021 654 aaKnown RBP22.41■■□□□ 1.18
DDR1-263ENST00000508317 CYP27B1O15528 508 aa22.4■■□□□ 1.18
DDR1-263ENST00000508317 IFNL2Q8IZJ0 200 aa22.4■■□□□ 1.18
DDR1-263ENST00000508317 POLKQ9UBT6 870 aa22.4■■□□□ 1.18
DDR1-263ENST00000508317 KNSTRNQ9Y448 316 aa22.4■■□□□ 1.18
DDR1-263ENST00000508317 KIF20BQ96Q89 1820 aa22.4■■□□□ 1.18
DDR1-263ENST00000508317 MORC1Q86VD1 984 aa22.39■■□□□ 1.17
DDR1-263ENST00000508317 EYA1Q99502 592 aa22.39■■□□□ 1.17
DDR1-263ENST00000508317 PANK3Q9H999 370 aa22.39■■□□□ 1.17
DDR1-263ENST00000508317 HSP90AB1P08238 724 aaKnown RBP22.38■■□□□ 1.17
DDR1-263ENST00000508317 NKX1-1Q15270 411 aaPredicted RBP22.36■■□□□ 1.17
DDR1-263ENST00000508317 COL23A1Q86Y22 540 aaPredicted RBP22.36■■□□□ 1.17
DDR1-263ENST00000508317 NLGN2Q8NFZ4 835 aa22.36■■□□□ 1.17
DDR1-263ENST00000508317 DOT1LQ8TEK3 1739 aa22.36■■□□□ 1.17
DDR1-263ENST00000508317 PLEKHO1Q53GL0 409 aaPredicted RBP22.35■■□□□ 1.17
DDR1-263ENST00000508317 PIGBQ92521 554 aa22.35■■□□□ 1.17
DDR1-263ENST00000508317 GRIN3BO60391 1043 aa22.34■■□□□ 1.17
DDR1-263ENST00000508317 EIF4A2Q14240 407 aaKnown RBP22.34■■□□□ 1.17
DDR1-263ENST00000508317 COL24A1Q17RW2 1714 aa22.34■■□□□ 1.17
DDR1-263ENST00000508317 MSL1Q68DK7 614 aa22.33■■□□□ 1.17
DDR1-263ENST00000508317 PHKG2P15735 406 aa22.32■■□□□ 1.16
DDR1-263ENST00000508317 YBX3P16989 372 aaKnown RBP eCLIP22.32■■□□□ 1.16
DDR1-263ENST00000508317 AMOTQ4VCS5 1084 aa22.32■■□□□ 1.16
DDR1-263ENST00000508317 PLEKHG2Q9H7P9 1386 aa22.31■■□□□ 1.16
DDR1-263ENST00000508317 LOC102724428A0A0B4J2F2 783 aa22.31■■□□□ 1.16
DDR1-263ENST00000508317 PHF14O94880 888 aa22.31■■□□□ 1.16
DDR1-263ENST00000508317 SIK1P57059 783 aa22.31■■□□□ 1.16
DDR1-263ENST00000508317 C1orf141Q5JVX7 400 aa22.31■■□□□ 1.16
DDR1-263ENST00000508317 ATP6V1AP38606 617 aa22.3■■□□□ 1.16
DDR1-263ENST00000508317 RGPD2P0DJD1 1756 aa22.3■■□□□ 1.16
DDR1-263ENST00000508317 DCAF5Q96JK2 942 aa22.29■■□□□ 1.16
DDR1-263ENST00000508317 ERVV-2B6SEH9 535 aa22.28■■□□□ 1.16
DDR1-263ENST00000508317 SSFA2P28290 1259 aa22.28■■□□□ 1.16
DDR1-263ENST00000508317 CD2APQ9Y5K6 639 aa22.28■■□□□ 1.16
DDR1-263ENST00000508317 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.27■■□□□ 1.16
DDR1-263ENST00000508317 CABP4P57796 275 aa22.27■■□□□ 1.16
DDR1-263ENST00000508317 NCAPD2Q15021 1401 aa22.27■■□□□ 1.16
DDR1-263ENST00000508317 ZNF530Q6P9A1 599 aaPredicted RBP22.27■■□□□ 1.16
DDR1-263ENST00000508317 ATP10DQ9P241 1426 aa22.26■■□□□ 1.15
DDR1-263ENST00000508317 GNPATO15228 680 aa22.26■■□□□ 1.15
DDR1-263ENST00000508317 RBM42Q9BTD8 480 aaKnown RBP22.26■■□□□ 1.15
DDR1-263ENST00000508317 IGSF1Q8N6C5 1336 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms