RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 MPNDQ8N594 471 aa11.84□□□□□ -0.51
COL6A4P1-204ENST00000508169 RBM19Q9Y4C8 960 aaKnown RBP11.84□□□□□ -0.51
COL6A4P1-204ENST00000508169 PCDHGA11Q9Y5H2 935 aa11.84□□□□□ -0.51
COL6A4P1-204ENST00000508169 FAM69CQ0P6D2 419 aa11.83□□□□□ -0.52
COL6A4P1-204ENST00000508169 WNT7AO00755 349 aa11.82□□□□□ -0.52
COL6A4P1-204ENST00000508169 DKK1O94907 266 aa11.82□□□□□ -0.52
COL6A4P1-204ENST00000508169 SWI5Q1ZZU3 235 aa11.82□□□□□ -0.52
COL6A4P1-204ENST00000508169 CCDC102BQ68D86 513 aa11.82□□□□□ -0.52
COL6A4P1-204ENST00000508169 TPCN2Q8NHX9 752 aa11.82□□□□□ -0.52
COL6A4P1-204ENST00000508169 SIAH2O43255 324 aa11.81□□□□□ -0.52
COL6A4P1-204ENST00000508169 GRM5P41594 1212 aa11.81□□□□□ -0.52
COL6A4P1-204ENST00000508169 SCTRP47872 440 aa11.81□□□□□ -0.52
COL6A4P1-204ENST00000508169 SEC13P55735 322 aa11.81□□□□□ -0.52
COL6A4P1-204ENST00000508169 DHX9Q08211 1270 aaKnown RBP11.81□□□□□ -0.52
COL6A4P1-204ENST00000508169 CLP1Q92989 425 aaKnown RBP11.81□□□□□ -0.52
COL6A4P1-204ENST00000508169 TRIM52Q96A61 297 aa11.81□□□□□ -0.52
COL6A4P1-204ENST00000508169 GZF1Q9H116 711 aaPredicted RBP11.81□□□□□ -0.52
COL6A4P1-204ENST00000508169 ADH1CP00326 375 aa11.8□□□□□ -0.52
COL6A4P1-204ENST00000508169 MRGPRX2Q96LB1 330 aa11.8□□□□□ -0.52
COL6A4P1-204ENST00000508169 ESF1Q9H501 851 aaKnown RBP11.8□□□□□ -0.52
COL6A4P1-204ENST00000508169 CCDC9Q9Y3X0 531 aaKnown RBP11.8□□□□□ -0.52
COL6A4P1-204ENST00000508169 ERVK-9P63128 1117 aa11.79□□□□□ -0.52
COL6A4P1-204ENST00000508169 CC2D2BQ6DHV5 1058 aa11.79□□□□□ -0.52
COL6A4P1-204ENST00000508169 NR5A1Q13285 461 aa11.78□□□□□ -0.52
COL6A4P1-204ENST00000508169 SPRYD7Q5W111 196 aa11.78□□□□□ -0.52
COL6A4P1-204ENST00000508169 TMPRSS4Q9NRS4 437 aa11.78□□□□□ -0.52
COL6A4P1-204ENST00000508169 SLAIN2Q9P270 581 aa11.78□□□□□ -0.52
COL6A4P1-204ENST00000508169 IVNS1ABPQ9Y6Y0 642 aa11.78□□□□□ -0.52
COL6A4P1-204ENST00000508169 SFI1A8K8P3 1242 aa11.77□□□□□ -0.53
COL6A4P1-204ENST00000508169 CCDC116Q8IYX3 515 aa11.77□□□□□ -0.53
COL6A4P1-204ENST00000508169 CYLDQ9NQC7 956 aa11.77□□□□□ -0.53
COL6A4P1-204ENST00000508169 SSFA2P28290 1259 aa11.76□□□□□ -0.53
COL6A4P1-204ENST00000508169 ZNF784Q8NCA9 323 aaPredicted RBP11.76□□□□□ -0.53
COL6A4P1-204ENST00000508169 PLA2G2EQ9NZK7 142 aa11.76□□□□□ -0.53
COL6A4P1-204ENST00000508169 A0A0G2JS52 829 aa11.75□□□□□ -0.53
COL6A4P1-204ENST00000508169 ATP2B4P23634 1241 aa11.75□□□□□ -0.53
COL6A4P1-204ENST00000508169 ZNF697Q5TEC3 545 aa11.75□□□□□ -0.53
COL6A4P1-204ENST00000508169 TMCO4Q5TGY1 634 aa11.75□□□□□ -0.53
COL6A4P1-204ENST00000508169 PHLDB3Q6NSJ2 640 aa11.75□□□□□ -0.53
COL6A4P1-204ENST00000508169 PPP1R26Q5T8A7 1209 aaPredicted RBP11.74□□□□□ -0.53
COL6A4P1-204ENST00000508169 OSBPL3Q9H4L5 887 aa11.74□□□□□ -0.53
COL6A4P1-204ENST00000508169 GNEQ9Y223 722 aaKnown RBP11.74□□□□□ -0.53
COL6A4P1-204ENST00000508169 MYT1Q01538 1121 aa11.73□□□□□ -0.53
COL6A4P1-204ENST00000508169 ZNF598Q86UK7 904 aaKnown RBP11.73□□□□□ -0.53
COL6A4P1-204ENST00000508169 M0R2N6 131 aa11.72□□□□□ -0.53
COL6A4P1-204ENST00000508169 PRMT3O60678 531 aa11.72□□□□□ -0.53
COL6A4P1-204ENST00000508169 NR3C2P08235 984 aa11.72□□□□□ -0.53
COL6A4P1-204ENST00000508169 FOXC1Q12948 553 aa11.71□□□□□ -0.53
COL6A4P1-204ENST00000508169 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.71□□□□□ -0.53
COL6A4P1-204ENST00000508169 CCER1Q8TC90 406 aaPredicted RBP11.71□□□□□ -0.53
COL6A4P1-204ENST00000508169 HINFPQ9BQA5 517 aa11.71□□□□□ -0.53
COL6A4P1-204ENST00000508169 PGPEP1Q9NXJ5 209 aa11.71□□□□□ -0.53
COL6A4P1-204ENST00000508169 LILRA1O75019 489 aa11.7□□□□□ -0.54
COL6A4P1-204ENST00000508169 ALDH1A1P00352 501 aa11.7□□□□□ -0.54
COL6A4P1-204ENST00000508169 ARID4AP29374 1257 aaPredicted RBP11.7□□□□□ -0.54
COL6A4P1-204ENST00000508169 CYP2U1Q7Z449 544 aa11.7□□□□□ -0.54
COL6A4P1-204ENST00000508169 TXNDC2Q86VQ3 553 aa11.7□□□□□ -0.54
COL6A4P1-204ENST00000508169 ZNF358Q9NW07 568 aa11.7□□□□□ -0.54
COL6A4P1-204ENST00000508169 EMILIN1Q9Y6C2 1016 aa11.7□□□□□ -0.54
COL6A4P1-204ENST00000508169 TMEM229AB2RXF0 380 aa11.69□□□□□ -0.54
COL6A4P1-204ENST00000508169 TSEN2Q8NCE0 465 aaKnown RBP11.69□□□□□ -0.54
COL6A4P1-204ENST00000508169 PRIMPOLQ96LW4 560 aa11.69□□□□□ -0.54
COL6A4P1-204ENST00000508169 PRKD2Q9BZL6 878 aa11.69□□□□□ -0.54
COL6A4P1-204ENST00000508169 CXXC1Q9P0U4 656 aaPredicted RBP11.69□□□□□ -0.54
COL6A4P1-204ENST00000508169 WASF2Q9Y6W5 498 aa11.69□□□□□ -0.54
COL6A4P1-204ENST00000508169 V9GY48 417 aaPredicted RBP11.69□□□□□ -0.54
COL6A4P1-204ENST00000508169 SCNN1DP51172 638 aa11.68□□□□□ -0.54
COL6A4P1-204ENST00000508169 GDF10P55107 478 aa11.68□□□□□ -0.54
COL6A4P1-204ENST00000508169 NNTQ13423 1086 aa11.68□□□□□ -0.54
COL6A4P1-204ENST00000508169 OCLNQ16625 522 aa11.68□□□□□ -0.54
COL6A4P1-204ENST00000508169 C1orf216Q8TAB5 229 aa11.68□□□□□ -0.54
COL6A4P1-204ENST00000508169 PKD2L1Q9P0L9 805 aa11.68□□□□□ -0.54
COL6A4P1-204ENST00000508169 WASLO00401 505 aaPredicted RBP11.67□□□□□ -0.54
COL6A4P1-204ENST00000508169 BACH1O14867 736 aa11.66□□□□□ -0.54
COL6A4P1-204ENST00000508169 LGR5O75473 907 aa11.66□□□□□ -0.54
COL6A4P1-204ENST00000508169 STAU1O95793 577 aaKnown RBP11.66□□□□□ -0.54
COL6A4P1-204ENST00000508169 SNIP1Q8TAD8 396 aaKnown RBP11.66□□□□□ -0.54
COL6A4P1-204ENST00000508169 GNRH1P01148 92 aa11.65□□□□□ -0.54
COL6A4P1-204ENST00000508169 INHAP05111 366 aa11.65□□□□□ -0.54
COL6A4P1-204ENST00000508169 ADD1P35611 737 aaKnown RBP11.65□□□□□ -0.54
COL6A4P1-204ENST00000508169 MFAP1P55081 439 aaKnown RBP11.65□□□□□ -0.54
COL6A4P1-204ENST00000508169 SND1Q7KZF4 910 aaKnown RBP eCLIP11.65□□□□□ -0.54
COL6A4P1-204ENST00000508169 ETNK1Q9HBU6 452 aa11.65□□□□□ -0.54
COL6A4P1-204ENST00000508169 MTMR7Q9Y216 660 aa11.64□□□□□ -0.55
COL6A4P1-204ENST00000508169 WEE1P30291 646 aa11.63□□□□□ -0.55
COL6A4P1-204ENST00000508169 ESCO1Q5FWF5 840 aa11.63□□□□□ -0.55
COL6A4P1-204ENST00000508169 SERTAD1Q9UHV2 236 aa11.63□□□□□ -0.55
COL6A4P1-204ENST00000508169 SCNN1AP37088 669 aa11.62□□□□□ -0.55
COL6A4P1-204ENST00000508169 TAS1R3Q7RTX0 852 aa11.62□□□□□ -0.55
COL6A4P1-204ENST00000508169 TTC24A2A3L6 582 aaPredicted RBP11.61□□□□□ -0.55
COL6A4P1-204ENST00000508169 GDF9O60383 454 aa11.61□□□□□ -0.55
COL6A4P1-204ENST00000508169 TNS4Q8IZW8 715 aa11.61□□□□□ -0.55
COL6A4P1-204ENST00000508169 CYP4X1Q8N118 509 aa11.61□□□□□ -0.55
COL6A4P1-204ENST00000508169 ARHGEF10LQ9HCE6 1279 aa11.61□□□□□ -0.55
COL6A4P1-204ENST00000508169 RAB6BQ9NRW1 208 aa11.61□□□□□ -0.55
COL6A4P1-204ENST00000508169 ADH1AP07327 375 aa11.6□□□□□ -0.55
COL6A4P1-204ENST00000508169 SERPINB4P48594 390 aa11.6□□□□□ -0.55
COL6A4P1-204ENST00000508169 J3QL48 77 aa11.59□□□□□ -0.55
COL6A4P1-204ENST00000508169 IGFBP4P22692 258 aa11.59□□□□□ -0.55
COL6A4P1-204ENST00000508169 EPHA4P54764 986 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms