RNA–Protein interactions for RNA: ENST00000508139.1

FGFR4-210, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 5

Gene FGFR4, Length 720 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-210ENST00000508139 TFCP2L1Q9NZI6 479 aa24.51■■□□□ 1.51
FGFR4-210ENST00000508139 GIGYF1O75420 1035 aaPredicted RBP24.5■■□□□ 1.51
FGFR4-210ENST00000508139 NLGN2Q8NFZ4 835 aa24.5■■□□□ 1.51
FGFR4-210ENST00000508139 TAF1LQ8IZX4 1826 aa24.49■■□□□ 1.51
FGFR4-210ENST00000508139 ANKRD36BQ8N2N9 1353 aa24.48■■□□□ 1.51
FGFR4-210ENST00000508139 NSD2O96028 1365 aa24.47■■□□□ 1.51
FGFR4-210ENST00000508139 IP6K1Q92551 441 aa24.47■■□□□ 1.51
FGFR4-210ENST00000508139 PRIM1P49642 420 aaKnown RBP24.46■■□□□ 1.51
FGFR4-210ENST00000508139 CARD11Q9BXL7 1154 aa24.46■■□□□ 1.51
FGFR4-210ENST00000508139 MEGF6O75095 1541 aa24.45■■□□□ 1.51
FGFR4-210ENST00000508139 TERF2IPQ9NYB0 399 aa24.45■■□□□ 1.5
FGFR4-210ENST00000508139 MSH5O43196 834 aa24.43■■□□□ 1.5
FGFR4-210ENST00000508139 ITGB4P16144 1822 aa24.42■■□□□ 1.5
FGFR4-210ENST00000508139 YBX3P16989 372 aaKnown RBP eCLIP24.41■■□□□ 1.56e-6■□□□□ 10.9
FGFR4-210ENST00000508139 CCNL1Q9UK58 526 aaPredicted RBP24.41■■□□□ 1.5
FGFR4-210ENST00000508139 MAP3K19Q56UN5 1328 aa24.4■■□□□ 1.5
FGFR4-210ENST00000508139 CEP350Q5VT06 3117 aa24.39■■□□□ 1.5
FGFR4-210ENST00000508139 FBLN1P23142 703 aa24.39■■□□□ 1.49
FGFR4-210ENST00000508139 HOXC9P31274 260 aa24.39■■□□□ 1.49
FGFR4-210ENST00000508139 MSL1Q68DK7 614 aa24.39■■□□□ 1.49
FGFR4-210ENST00000508139 ZCRB1Q8TBF4 217 aaKnown RBP24.39■■□□□ 1.49
FGFR4-210ENST00000508139 KIF20BQ96Q89 1820 aa24.38■■□□□ 1.49
FGFR4-210ENST00000508139 AMPHP49418 695 aa24.38■■□□□ 1.49
FGFR4-210ENST00000508139 COL23A1Q86Y22 540 aaPredicted RBP24.37■■□□□ 1.49
FGFR4-210ENST00000508139 TOGARAM1Q9Y4F4 1720 aa24.37■■□□□ 1.49
FGFR4-210ENST00000508139 USP47Q96K76 1375 aa24.37■■□□□ 1.49
FGFR4-210ENST00000508139 COG3Q96JB2 828 aa24.36■■□□□ 1.49
FGFR4-210ENST00000508139 UBR3Q6ZT12 1888 aa24.35■■□□□ 1.49
FGFR4-210ENST00000508139 ATP10DQ9P241 1426 aa24.35■■□□□ 1.49
FGFR4-210ENST00000508139 GRIN3BO60391 1043 aa24.34■■□□□ 1.49
FGFR4-210ENST00000508139 USHBP1Q8N6Y0 703 aa24.34■■□□□ 1.49
FGFR4-210ENST00000508139 C4BP0C0L5 1744 aa24.33■■□□□ 1.49
FGFR4-210ENST00000508139 RTL1A6NKG5 1358 aa24.31■■□□□ 1.48
FGFR4-210ENST00000508139 RRS1Q15050 365 aaKnown RBP24.3■■□□□ 1.48
FGFR4-210ENST00000508139 SMG6Q86US8 1419 aaKnown RBP24.29■■□□□ 1.48
FGFR4-210ENST00000508139 IFFO2Q5TF58 517 aa24.29■■□□□ 1.48
FGFR4-210ENST00000508139 NBPF6Q5VWK0 638 aa24.29■■□□□ 1.48
FGFR4-210ENST00000508139 NBPF4Q96M43 638 aa24.29■■□□□ 1.48
FGFR4-210ENST00000508139 PUS7Q96PZ0 661 aaKnown RBP24.29■■□□□ 1.48
FGFR4-210ENST00000508139 PKD1L3Q7Z443 1732 aa24.29■■□□□ 1.48
FGFR4-210ENST00000508139 RAPGEF4Q8WZA2 1011 aa24.27■■□□□ 1.48
FGFR4-210ENST00000508139 TONSLQ96HA7 1378 aa24.27■■□□□ 1.48
FGFR4-210ENST00000508139 PALLDQ8WX93 1383 aa24.26■■□□□ 1.47
FGFR4-210ENST00000508139 TESK2Q96S53 571 aa24.25■■□□□ 1.47
FGFR4-210ENST00000508139 MAP2P11137 1827 aaKnown RBP24.24■■□□□ 1.47
FGFR4-210ENST00000508139 TATP17735 454 aaPredicted RBP24.24■■□□□ 1.47
FGFR4-210ENST00000508139 ZNF526Q8TF50 670 aaPredicted RBP24.24■■□□□ 1.47
FGFR4-210ENST00000508139 CGNL1Q0VF96 1302 aa24.24■■□□□ 1.47
FGFR4-210ENST00000508139 GGNBP2Q9H3C7 697 aa24.23■■□□□ 1.47
FGFR4-210ENST00000508139 GPBP1L1Q9HC44 474 aaPredicted RBP24.23■■□□□ 1.47
FGFR4-210ENST00000508139 WWC3Q9ULE0 1092 aa24.23■■□□□ 1.47
FGFR4-210ENST00000508139 CD2APQ9Y5K6 639 aa24.23■■□□□ 1.47
FGFR4-210ENST00000508139 PCDH11XQ9BZA7 1347 aa24.23■■□□□ 1.47
FGFR4-210ENST00000508139 PCDH11YQ9BZA8 1340 aa24.23■■□□□ 1.47
FGFR4-210ENST00000508139 ADCY9O60503 1353 aa24.22■■□□□ 1.47
FGFR4-210ENST00000508139 ST20-MTHFSA0A0A6YYL1 179 aa24.22■■□□□ 1.47
FGFR4-210ENST00000508139 MPRIPQ6WCQ1 1025 aa24.22■■□□□ 1.47
FGFR4-210ENST00000508139 PHF14O94880 888 aa24.19■■□□□ 1.46
FGFR4-210ENST00000508139 FLAD1Q8NFF5 587 aa24.19■■□□□ 1.46
FGFR4-210ENST00000508139 AK7Q96M32 723 aa24.19■■□□□ 1.46
FGFR4-210ENST00000508139 N4BP2Q86UW6 1770 aaPredicted RBP24.19■■□□□ 1.46
FGFR4-210ENST00000508139 SMIM5Q71RC9 77 aa24.18■■□□□ 1.46
FGFR4-210ENST00000508139 AMIGO3Q86WK7 504 aa24.18■■□□□ 1.46
FGFR4-210ENST00000508139 INSRP06213 1382 aa24.17■■□□□ 1.46
FGFR4-210ENST00000508139 IGSF1Q8N6C5 1336 aa24.17■■□□□ 1.46
FGFR4-210ENST00000508139 FYB1O15117 783 aa24.17■■□□□ 1.46
FGFR4-210ENST00000508139 HSP90AB2PQ58FF8 381 aa24.17■■□□□ 1.46
FGFR4-210ENST00000508139 ANKRD26Q9UPS8 1709 aa24.17■■□□□ 1.46
FGFR4-210ENST00000508139 FLT4P35916 1363 aa24.16■■□□□ 1.46
FGFR4-210ENST00000508139 KIF13BQ9NQT8 1826 aa24.15■■□□□ 1.46
FGFR4-210ENST00000508139 CYP27B1O15528 508 aa24.15■■□□□ 1.46
FGFR4-210ENST00000508139 KIAA1551Q9HCM1 1747 aa24.15■■□□□ 1.46
FGFR4-210ENST00000508139 NSD3Q9BZ95 1437 aa24.13■■□□□ 1.45
FGFR4-210ENST00000508139 HSPA6P17066 643 aa24.13■■□□□ 1.45
FGFR4-210ENST00000508139 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.12■■□□□ 1.45
FGFR4-210ENST00000508139 SMARCC1Q92922 1105 aaPredicted RBP24.12■■□□□ 1.45
FGFR4-210ENST00000508139 CICQ96RK0 1608 aaPredicted RBP24.12■■□□□ 1.45
FGFR4-210ENST00000508139 HMGB2P26583 209 aaKnown RBP24.11■■□□□ 1.45
FGFR4-210ENST00000508139 PIGBQ92521 554 aa24.09■■□□□ 1.45
FGFR4-210ENST00000508139 CLSPNQ9HAW4 1339 aa24.09■■□□□ 1.45
FGFR4-210ENST00000508139 KIF24Q5T7B8 1368 aa24.08■■□□□ 1.45
FGFR4-210ENST00000508139 LINC00116Q8NCU8 138 aa24.08■■□□□ 1.45
FGFR4-210ENST00000508139 EMILIN1Q9Y6C2 1016 aa24.08■■□□□ 1.45
FGFR4-210ENST00000508139 BRCA1P38398 1863 aaKnown RBP24.08■■□□□ 1.45
FGFR4-210ENST00000508139 SLC24A1O60721 1099 aa24.07■■□□□ 1.44
FGFR4-210ENST00000508139 SSFA2P28290 1259 aa24.06■■□□□ 1.44
FGFR4-210ENST00000508139 TMF1P82094 1093 aa24.06■■□□□ 1.44
FGFR4-210ENST00000508139 NCAPD2Q15021 1401 aa24.06■■□□□ 1.44
FGFR4-210ENST00000508139 COL5A3P25940 1745 aaPredicted RBP24.05■■□□□ 1.44
FGFR4-210ENST00000508139 LOC102724428A0A0B4J2F2 783 aa24.05■■□□□ 1.44
FGFR4-210ENST00000508139 SIK1P57059 783 aa24.05■■□□□ 1.44
FGFR4-210ENST00000508139 PCGF6Q9BYE7 350 aa24.05■■□□□ 1.44
FGFR4-210ENST00000508139 GNPATO15228 680 aa24.04■■□□□ 1.44
FGFR4-210ENST00000508139 C4AP0C0L4 1744 aa24.04■■□□□ 1.44
FGFR4-210ENST00000508139 KIF3CO14782 793 aa24.03■■□□□ 1.44
FGFR4-210ENST00000508139 PPM1GO15355 546 aaPredicted RBP24.03■■□□□ 1.44
FGFR4-210ENST00000508139 PXDNLA1KZ92 1463 aa24.02■■□□□ 1.44
FGFR4-210ENST00000508139 ITPK1Q13572 414 aa24.02■■□□□ 1.44
FGFR4-210ENST00000508139 TMOD3Q9NYL9 352 aa24.02■■□□□ 1.44
FGFR4-210ENST00000508139 SPG7Q9UQ90 795 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms