RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 SLC52A1Q9NWF4 448 aa9.74□□□□□ -0.85
CLCN3-206ENST00000507875 ZMIZ1Q9ULJ6 1067 aa9.74□□□□□ -0.85
CLCN3-206ENST00000507875 RPGRIP1LQ68CZ1 1315 aa9.74□□□□□ -0.85
CLCN3-206ENST00000507875 RALGAPBQ86X10 1494 aa9.73□□□□□ -0.85
CLCN3-206ENST00000507875 ZNF16P17020 682 aaPredicted RBP9.73□□□□□ -0.85
CLCN3-206ENST00000507875 TAGLNQ01995 201 aaKnown RBP9.73□□□□□ -0.85
CLCN3-206ENST00000507875 LRRN4Q8WUT4 740 aa9.73□□□□□ -0.85
CLCN3-206ENST00000507875 MAFBQ9Y5Q3 323 aaPredicted RBP9.73□□□□□ -0.85
CLCN3-206ENST00000507875 C3orf80F5H4A9 247 aa9.73□□□□□ -0.85
CLCN3-206ENST00000507875 TMEM164Q5U3C3 297 aa9.72□□□□□ -0.85
CLCN3-206ENST00000507875 NDUFB9Q9Y6M9 179 aa9.72□□□□□ -0.85
CLCN3-206ENST00000507875 TMEM131LA2VDJ0 1609 aa9.72□□□□□ -0.85
CLCN3-206ENST00000507875 NUTM2BA6NNL0 878 aaPredicted RBP9.72□□□□□ -0.85
CLCN3-206ENST00000507875 NUTM2EB1AL46 878 aaPredicted RBP9.72□□□□□ -0.85
CLCN3-206ENST00000507875 OATP04181 439 aa9.72□□□□□ -0.85
CLCN3-206ENST00000507875 NUTM2DQ5VT03 806 aaPredicted RBP9.72□□□□□ -0.85
CLCN3-206ENST00000507875 NUTM2AQ8IVF1 878 aaPredicted RBP9.72□□□□□ -0.85
CLCN3-206ENST00000507875 BRPF3Q9ULD4 1205 aa9.72□□□□□ -0.85
CLCN3-206ENST00000507875 GNEQ9Y223 722 aaKnown RBP9.71□□□□□ -0.85
CLCN3-206ENST00000507875 A0A0U1RQG5 324 aaPredicted RBP9.71□□□□□ -0.86
CLCN3-206ENST00000507875 ATG7O95352 703 aa9.71□□□□□ -0.86
CLCN3-206ENST00000507875 GUCA2AQ02747 115 aa9.71□□□□□ -0.86
CLCN3-206ENST00000507875 SLAIN1Q8ND83 568 aa9.71□□□□□ -0.86
CLCN3-206ENST00000507875 ZFYVE9O95405 1425 aa9.7□□□□□ -0.86
CLCN3-206ENST00000507875 TIE1P35590 1138 aa9.7□□□□□ -0.86
CLCN3-206ENST00000507875 NRXN1Q9ULB1 1477 aa9.7□□□□□ -0.86
CLCN3-206ENST00000507875 PRAG1Q86YV5 1406 aa9.7□□□□□ -0.86
CLCN3-206ENST00000507875 MYO5BQ9ULV0 1848 aa9.7□□□□□ -0.86
CLCN3-206ENST00000507875 SMARCA5O60264 1052 aaPredicted RBP9.7□□□□□ -0.86
CLCN3-206ENST00000507875 PHF14O94880 888 aa9.7□□□□□ -0.86
CLCN3-206ENST00000507875 CD46P15529 392 aa9.7□□□□□ -0.86
CLCN3-206ENST00000507875 SERPINB4P48594 390 aa9.7□□□□□ -0.86
CLCN3-206ENST00000507875 POTEDQ86YR6 584 aa9.7□□□□□ -0.86
CLCN3-206ENST00000507875 SETBP1Q9Y6X0 1596 aa9.69□□□□□ -0.86
CLCN3-206ENST00000507875 NLRP1Q9C000 1473 aa9.69□□□□□ -0.86
CLCN3-206ENST00000507875 FBXO41Q8TF61 875 aa9.68□□□□□ -0.86
CLCN3-206ENST00000507875 FAM198AQ9UFP1 575 aa9.68□□□□□ -0.86
CLCN3-206ENST00000507875 DDX11L8A8MPP1 907 aa9.68□□□□□ -0.86
CLCN3-206ENST00000507875 PIK3CDO00329 1044 aa9.68□□□□□ -0.86
CLCN3-206ENST00000507875 IRX5P78411 483 aaPredicted RBP9.68□□□□□ -0.86
CLCN3-206ENST00000507875 PIP4P2Q8N4L2 257 aa9.68□□□□□ -0.86
CLCN3-206ENST00000507875 GPRASP1Q5JY77 1395 aa9.68□□□□□ -0.86
CLCN3-206ENST00000507875 GIPC2Q8TF65 315 aa9.67□□□□□ -0.86
CLCN3-206ENST00000507875 UGGT1Q9NYU2 1555 aa9.67□□□□□ -0.86
CLCN3-206ENST00000507875 IQGAP1P46940 1657 aa9.67□□□□□ -0.86
CLCN3-206ENST00000507875 GALR2O43603 387 aaPredicted RBP9.67□□□□□ -0.86
CLCN3-206ENST00000507875 TSC1Q92574 1164 aa9.67□□□□□ -0.86
CLCN3-206ENST00000507875 NEXMIFQ5QGS0 1516 aa9.67□□□□□ -0.86
CLCN3-206ENST00000507875 PTCD2Q8WV60 388 aaKnown RBP9.66□□□□□ -0.86
CLCN3-206ENST00000507875 UBR1Q8IWV7 1749 aa9.66□□□□□ -0.86
CLCN3-206ENST00000507875 DCAF11Q8TEB1 546 aa9.66□□□□□ -0.86
CLCN3-206ENST00000507875 PRM3Q9NNZ6 103 aa9.66□□□□□ -0.86
CLCN3-206ENST00000507875 ZNF142P52746 1687 aaPredicted RBP9.65□□□□□ -0.86
CLCN3-206ENST00000507875 TNRQ92752 1358 aa9.65□□□□□ -0.86
CLCN3-206ENST00000507875 RCCD1A6NED2 376 aa9.65□□□□□ -0.86
CLCN3-206ENST00000507875 CENPBP07199 599 aaPredicted RBP9.65□□□□□ -0.86
CLCN3-206ENST00000507875 PCDHGC3Q9UN70 934 aa9.65□□□□□ -0.86
CLCN3-206ENST00000507875 PPM1GO15355 546 aaPredicted RBP9.65□□□□□ -0.86
CLCN3-206ENST00000507875 DIXDC1Q155Q3 683 aa9.65□□□□□ -0.86
CLCN3-206ENST00000507875 NUTM1Q86Y26 1132 aa9.65□□□□□ -0.86
CLCN3-206ENST00000507875 MYO3AQ8NEV4 1616 aa9.64□□□□□ -0.87
CLCN3-206ENST00000507875 EIF4G2P78344 907 aaKnown RBP eCLIP9.64□□□□□ -0.87
CLCN3-206ENST00000507875 NBPF8Q3BBV2 869 aa9.64□□□□□ -0.87
CLCN3-206ENST00000507875 CERKQ8TCT0 537 aa9.64□□□□□ -0.87
CLCN3-206ENST00000507875 BCL2L13Q9BXK5 485 aa9.64□□□□□ -0.87
CLCN3-206ENST00000507875 PPP1R1BQ9UD71 204 aaPredicted RBP9.64□□□□□ -0.87
CLCN3-206ENST00000507875 CEP170BQ9Y4F5 1589 aaPredicted RBP9.64□□□□□ -0.87
CLCN3-206ENST00000507875 ATN1P54259 1190 aaPredicted RBP9.64□□□□□ -0.87
CLCN3-206ENST00000507875 CCDC125Q86Z20 511 aa9.64□□□□□ -0.87
CLCN3-206ENST00000507875 TTC13Q8NBP0 860 aa9.64□□□□□ -0.87
CLCN3-206ENST00000507875 A2ML1A8K2U0 1454 aa9.64□□□□□ -0.87
CLCN3-206ENST00000507875 TCF3P15923 654 aa9.63□□□□□ -0.87
CLCN3-206ENST00000507875 STRCQ7RTU9 1775 aa9.63□□□□□ -0.87
CLCN3-206ENST00000507875 SOCS7O14512 581 aa9.63□□□□□ -0.87
CLCN3-206ENST00000507875 WASHC4Q2M389 1173 aa9.63□□□□□ -0.87
CLCN3-206ENST00000507875 C6orf132Q5T0Z8 1188 aa9.63□□□□□ -0.87
CLCN3-206ENST00000507875 THEMISQ8N1K5 641 aaPredicted RBP9.63□□□□□ -0.87
CLCN3-206ENST00000507875 EPAS1Q99814 870 aa9.63□□□□□ -0.87
CLCN3-206ENST00000507875 HDGFP51858 240 aaKnown RBP9.62□□□□□ -0.87
CLCN3-206ENST00000507875 TMED8Q6PL24 325 aaPredicted RBP9.62□□□□□ -0.87
CLCN3-206ENST00000507875 PIK3C2GO75747 1445 aa9.62□□□□□ -0.87
CLCN3-206ENST00000507875 IDI1Q13907 227 aa9.61□□□□□ -0.87
CLCN3-206ENST00000507875 TUSC1Q2TAM9 212 aa9.61□□□□□ -0.87
CLCN3-206ENST00000507875 DEPDC4Q8N2C3 294 aa9.61□□□□□ -0.87
CLCN3-206ENST00000507875 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.61□□□□□ -0.87
CLCN3-206ENST00000507875 RGL3Q3MIN7 710 aa9.61□□□□□ -0.87
CLCN3-206ENST00000507875 ROCK2O75116 1388 aaKnown RBP9.61□□□□□ -0.87
CLCN3-206ENST00000507875 TYW1BQ6NUM6 668 aa9.6□□□□□ -0.87
CLCN3-206ENST00000507875 ANKLE2Q86XL3 938 aa9.6□□□□□ -0.87
CLCN3-206ENST00000507875 L3MBTL3Q96JM7 780 aaPredicted RBP9.6□□□□□ -0.87
CLCN3-206ENST00000507875 SCAF11Q99590 1463 aaKnown RBP9.6□□□□□ -0.87
CLCN3-206ENST00000507875 SLIT1O75093 1534 aa9.6□□□□□ -0.87
CLCN3-206ENST00000507875 ZNF326Q5BKZ1 582 aaKnown RBP9.59□□□□□ -0.87
CLCN3-206ENST00000507875 OCEL1Q9H607 264 aa9.59□□□□□ -0.87
CLCN3-206ENST00000507875 EIF3AQ14152 1382 aaKnown RBP9.59□□□□□ -0.87
CLCN3-206ENST00000507875 USP47Q96K76 1375 aa9.59□□□□□ -0.87
CLCN3-206ENST00000507875 SETD1AO15047 1707 aaKnown RBP9.59□□□□□ -0.87
CLCN3-206ENST00000507875 CFAP99D6REC4 459 aa9.59□□□□□ -0.87
CLCN3-206ENST00000507875 CRTC2Q53ET0 693 aaPredicted RBP9.59□□□□□ -0.87
CLCN3-206ENST00000507875 CDCA7LQ96GN5 454 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms