RNA–Protein interactions for RNA: ENST00000507816.5

SEC31A-223, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 4

Gene SEC31A, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-223ENST00000507816 DOT1LQ8TEK3 1739 aa28.25■■■□□ 2.11
SEC31A-223ENST00000507816 KCNQ4P56696 695 aa28.24■■■□□ 2.11
SEC31A-223ENST00000507816 PELP1Q8IZL8 1130 aaKnown RBP28.24■■■□□ 2.11
SEC31A-223ENST00000507816 NLGN2Q8NFZ4 835 aa28.24■■■□□ 2.11
SEC31A-223ENST00000507816 LY75O60449 1722 aa28.23■■■□□ 2.11
SEC31A-223ENST00000507816 KAT6BQ8WYB5 2073 aa28.23■■■□□ 2.11
SEC31A-223ENST00000507816 MAP3K19Q56UN5 1328 aa28.22■■■□□ 2.11
SEC31A-223ENST00000507816 MEGF6O75095 1541 aa28.22■■■□□ 2.11
SEC31A-223ENST00000507816 HOXC9P31274 260 aa28.21■■■□□ 2.11
SEC31A-223ENST00000507816 SHANK3Q9BYB0 1731 aa28.21■■■□□ 2.11
SEC31A-223ENST00000507816 ZCRB1Q8TBF4 217 aaKnown RBP28.2■■■□□ 2.1
SEC31A-223ENST00000507816 COG3Q96JB2 828 aa28.2■■■□□ 2.1
SEC31A-223ENST00000507816 CCNL1Q9UK58 526 aaPredicted RBP28.2■■■□□ 2.1
SEC31A-223ENST00000507816 RTL1A6NKG5 1358 aa28.17■■■□□ 2.1
SEC31A-223ENST00000507816 AMPHP49418 695 aa28.17■■■□□ 2.1
SEC31A-223ENST00000507816 USP47Q96K76 1375 aa28.16■■■□□ 2.1
SEC31A-223ENST00000507816 GRIN3BO60391 1043 aa28.16■■■□□ 2.1
SEC31A-223ENST00000507816 YBX3P16989 372 aaKnown RBP eCLIP28.14■■■□□ 2.1
SEC31A-223ENST00000507816 CGNL1Q0VF96 1302 aa28.14■■■□□ 2.09
SEC31A-223ENST00000507816 COL23A1Q86Y22 540 aaPredicted RBP28.13■■■□□ 2.09
SEC31A-223ENST00000507816 MSH5O43196 834 aa28.12■■■□□ 2.09
SEC31A-223ENST00000507816 FBLN1P23142 703 aa28.11■■■□□ 2.09
SEC31A-223ENST00000507816 TESK2Q96S53 571 aa28.11■■■□□ 2.09
SEC31A-223ENST00000507816 CEP350Q5VT06 3117 aa28.1■■■□□ 2.09
SEC31A-223ENST00000507816 RGPD2P0DJD1 1756 aa28.09■■■□□ 2.09
SEC31A-223ENST00000507816 TONSLQ96HA7 1378 aa28.09■■■□□ 2.09
SEC31A-223ENST00000507816 SMG6Q86US8 1419 aaKnown RBP28.09■■■□□ 2.09
SEC31A-223ENST00000507816 NBPF6Q5VWK0 638 aa28.08■■■□□ 2.09
SEC31A-223ENST00000507816 NBPF4Q96M43 638 aa28.08■■■□□ 2.09
SEC31A-223ENST00000507816 MSL1Q68DK7 614 aa28.07■■■□□ 2.08
SEC31A-223ENST00000507816 C5P01031 1676 aa28.07■■■□□ 2.08
SEC31A-223ENST00000507816 HMGB2P26583 209 aaKnown RBP28.06■■■□□ 2.08
SEC31A-223ENST00000507816 RAPGEF4Q8WZA2 1011 aa28.06■■■□□ 2.08
SEC31A-223ENST00000507816 SLC24A1O60721 1099 aa28.05■■■□□ 2.08
SEC31A-223ENST00000507816 RRS1Q15050 365 aaKnown RBP28.05■■■□□ 2.08
SEC31A-223ENST00000507816 ATP10DQ9P241 1426 aa28.05■■■□□ 2.08
SEC31A-223ENST00000507816 CD2APQ9Y5K6 639 aa28.05■■■□□ 2.08
SEC31A-223ENST00000507816 PCDH11XQ9BZA7 1347 aa28.04■■■□□ 2.08
SEC31A-223ENST00000507816 PCDH11YQ9BZA8 1340 aa28.04■■■□□ 2.08
SEC31A-223ENST00000507816 USHBP1Q8N6Y0 703 aa28.04■■■□□ 2.08
SEC31A-223ENST00000507816 FLAD1Q8NFF5 587 aa28.04■■■□□ 2.08
SEC31A-223ENST00000507816 PALLDQ8WX93 1383 aa28.03■■■□□ 2.08
SEC31A-223ENST00000507816 ST20-MTHFSA0A0A6YYL1 179 aa28.03■■■□□ 2.08
SEC31A-223ENST00000507816 TATP17735 454 aaPredicted RBP28.01■■■□□ 2.07
SEC31A-223ENST00000507816 IFFO2Q5TF58 517 aa28■■■□□ 2.07
SEC31A-223ENST00000507816 INSRP06213 1382 aa27.99■■■□□ 2.07
SEC31A-223ENST00000507816 FYB1O15117 783 aa27.99■■■□□ 2.07
SEC31A-223ENST00000507816 ADCY9O60503 1353 aa27.99■■■□□ 2.07
SEC31A-223ENST00000507816 GGNBP2Q9H3C7 697 aa27.98■■■□□ 2.07
SEC31A-223ENST00000507816 FLT4P35916 1363 aa27.97■■■□□ 2.07
SEC31A-223ENST00000507816 KIF24Q5T7B8 1368 aa27.97■■■□□ 2.07
SEC31A-223ENST00000507816 C4BP0C0L5 1744 aa27.95■■■□□ 2.07
SEC31A-223ENST00000507816 HSP90AB2PQ58FF8 381 aa27.95■■■□□ 2.06
SEC31A-223ENST00000507816 MPRIPQ6WCQ1 1025 aa27.95■■■□□ 2.06
SEC31A-223ENST00000507816 GPBP1L1Q9HC44 474 aaPredicted RBP27.95■■■□□ 2.06
SEC31A-223ENST00000507816 TAF1LQ8IZX4 1826 aa27.95■■■□□ 2.06
SEC31A-223ENST00000507816 NSD3Q9BZ95 1437 aa27.94■■■□□ 2.06
SEC31A-223ENST00000507816 CYP27B1O15528 508 aa27.93■■■□□ 2.06
SEC31A-223ENST00000507816 SMARCC1Q92922 1105 aaPredicted RBP27.93■■■□□ 2.06
SEC31A-223ENST00000507816 AK7Q96M32 723 aa27.93■■■□□ 2.06
SEC31A-223ENST00000507816 TOGARAM1Q9Y4F4 1720 aa27.92■■■□□ 2.06
SEC31A-223ENST00000507816 AMIGO3Q86WK7 504 aa27.9■■■□□ 2.06
SEC31A-223ENST00000507816 TMF1P82094 1093 aa27.89■■■□□ 2.06
SEC31A-223ENST00000507816 PKD1L3Q7Z443 1732 aa27.89■■■□□ 2.05
SEC31A-223ENST00000507816 NCAPD2Q15021 1401 aa27.88■■■□□ 2.05
SEC31A-223ENST00000507816 IGSF1Q8N6C5 1336 aa27.88■■■□□ 2.05
SEC31A-223ENST00000507816 KIF20BQ96Q89 1820 aa27.87■■■□□ 2.05
SEC31A-223ENST00000507816 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.86■■■□□ 2.05
SEC31A-223ENST00000507816 PHF14O94880 888 aa27.86■■■□□ 2.05
SEC31A-223ENST00000507816 HSPA6P17066 643 aa27.86■■■□□ 2.05
SEC31A-223ENST00000507816 SSFA2P28290 1259 aa27.86■■■□□ 2.05
SEC31A-223ENST00000507816 UBR3Q6ZT12 1888 aa27.85■■■□□ 2.05
SEC31A-223ENST00000507816 ZNF526Q8TF50 670 aaPredicted RBP27.85■■■□□ 2.05
SEC31A-223ENST00000507816 PIGBQ92521 554 aa27.85■■■□□ 2.05
SEC31A-223ENST00000507816 NKX1-1Q15270 411 aaPredicted RBP27.84■■■□□ 2.05
SEC31A-223ENST00000507816 ITGB4P16144 1822 aa27.83■■■□□ 2.05
SEC31A-223ENST00000507816 LOC102724428A0A0B4J2F2 783 aa27.81■■■□□ 2.04
SEC31A-223ENST00000507816 SIK1P57059 783 aa27.81■■■□□ 2.04
SEC31A-223ENST00000507816 SMIM5Q71RC9 77 aa27.81■■■□□ 2.04
SEC31A-223ENST00000507816 LINC00116Q8NCU8 138 aa27.81■■■□□ 2.04
SEC31A-223ENST00000507816 EMILIN1Q9Y6C2 1016 aa27.81■■■□□ 2.04
SEC31A-223ENST00000507816 MAP2P11137 1827 aaKnown RBP27.81■■■□□ 2.04
SEC31A-223ENST00000507816 SPG7Q9UQ90 795 aa27.8■■■□□ 2.04
SEC31A-223ENST00000507816 CICQ96RK0 1608 aaPredicted RBP27.8■■■□□ 2.04
SEC31A-223ENST00000507816 CDCA8Q53HL2 280 aa27.79■■■□□ 2.04
SEC31A-223ENST00000507816 WWC3Q9ULE0 1092 aa27.79■■■□□ 2.04
SEC31A-223ENST00000507816 ANKRD26Q9UPS8 1709 aa27.77■■■□□ 2.04
SEC31A-223ENST00000507816 GNPATO15228 680 aa27.76■■■□□ 2.03
SEC31A-223ENST00000507816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.76■■■□□ 2.037e-13■□□□□ 11.2
SEC31A-223ENST00000507816 TMOD3Q9NYL9 352 aa27.76■■■□□ 2.03
SEC31A-223ENST00000507816 CARD14Q9BXL6 1004 aa27.75■■■□□ 2.03
SEC31A-223ENST00000507816 ITPK1Q13572 414 aa27.74■■■□□ 2.03
SEC31A-223ENST00000507816 KIF3CO14782 793 aa27.73■■■□□ 2.03
SEC31A-223ENST00000507816 ASAP1Q9ULH1 1129 aa27.73■■■□□ 2.03
SEC31A-223ENST00000507816 WASHC2AQ641Q2 1341 aa27.72■■■□□ 2.03
SEC31A-223ENST00000507816 PXDNLA1KZ92 1463 aa27.72■■■□□ 2.03
SEC31A-223ENST00000507816 PPM1GO15355 546 aaPredicted RBP27.72■■■□□ 2.03
SEC31A-223ENST00000507816 ATP6V1AP38606 617 aa27.72■■■□□ 2.03
SEC31A-223ENST00000507816 EYA1Q99502 592 aa27.71■■■□□ 2.03
SEC31A-223ENST00000507816 MMP10P09238 476 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms