RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 CDCA7LQ96GN5 454 aa22.86■■□□□ 1.25
RNF4-209ENST00000507784 SLIT2O94813 1529 aa22.86■■□□□ 1.25
RNF4-209ENST00000507784 ZNF521Q96K83 1311 aa22.85■■□□□ 1.25
RNF4-209ENST00000507784 ZNF530Q6P9A1 599 aaPredicted RBP22.85■■□□□ 1.25
RNF4-209ENST00000507784 UNC5CLQ8IV45 518 aa22.85■■□□□ 1.25
RNF4-209ENST00000507784 WDR63Q8IWG1 891 aa22.85■■□□□ 1.25
RNF4-209ENST00000507784 IL2RBP14784 551 aa22.84■■□□□ 1.25
RNF4-209ENST00000507784 RTF1Q92541 710 aaKnown RBP22.84■■□□□ 1.25
RNF4-209ENST00000507784 PHF23Q9BUL5 403 aaPredicted RBP22.84■■□□□ 1.25
RNF4-209ENST00000507784 SPG7Q9UQ90 795 aa22.84■■□□□ 1.25
RNF4-209ENST00000507784 MEGF6O75095 1541 aa22.83■■□□□ 1.25
RNF4-209ENST00000507784 GNAT3A8MTJ3 354 aa22.83■■□□□ 1.25
RNF4-209ENST00000507784 DCTN1Q14203 1278 aa22.83■■□□□ 1.25
RNF4-209ENST00000507784 USP21Q9UK80 565 aa22.83■■□□□ 1.25
RNF4-209ENST00000507784 PARP4Q9UKK3 1724 aaKnown RBP22.82■■□□□ 1.24
RNF4-209ENST00000507784 C1orf141Q5JVX7 400 aa22.82■■□□□ 1.24
RNF4-209ENST00000507784 THUMPD2Q9BTF0 503 aaKnown RBP22.82■■□□□ 1.24
RNF4-209ENST00000507784 MCM10Q7L590 875 aa22.81■■□□□ 1.24
RNF4-209ENST00000507784 FNBP4Q8N3X1 1017 aaPredicted RBP22.81■■□□□ 1.24
RNF4-209ENST00000507784 MAP3K5Q99683 1374 aa22.8■■□□□ 1.24
RNF4-209ENST00000507784 SLFN5Q08AF3 891 aa22.8■■□□□ 1.24
RNF4-209ENST00000507784 LAS1LQ9Y4W2 734 aaKnown RBP22.8■■□□□ 1.24
RNF4-209ENST00000507784 E9PSI1 815 aa22.79■■□□□ 1.24
RNF4-209ENST00000507784 HTATSF1O43719 755 aaKnown RBP22.79■■□□□ 1.24
RNF4-209ENST00000507784 CALD1Q05682 793 aaKnown RBP22.79■■□□□ 1.24
RNF4-209ENST00000507784 AKAP4Q5JQC9 854 aa22.79■■□□□ 1.24
RNF4-209ENST00000507784 AFF2P51816 1311 aa22.79■■□□□ 1.24
RNF4-209ENST00000507784 SPATA31A1Q5TZJ5 1347 aa22.79■■□□□ 1.24
RNF4-209ENST00000507784 ZCRB1Q8TBF4 217 aaKnown RBP22.78■■□□□ 1.24
RNF4-209ENST00000507784 SPINK5Q9NQ38 1064 aaPredicted RBP22.78■■□□□ 1.24
RNF4-209ENST00000507784 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.78■■□□□ 1.24
RNF4-209ENST00000507784 BCL9LQ86UU0 1499 aa22.78■■□□□ 1.24
RNF4-209ENST00000507784 SPATA31A5Q5VU36 1347 aa22.78■■□□□ 1.24
RNF4-209ENST00000507784 SPATA31A7Q8IWB4 1347 aa22.78■■□□□ 1.24
RNF4-209ENST00000507784 OVOS2A0A0G2JMS6 1433 aa22.77■■□□□ 1.24
RNF4-209ENST00000507784 VPS72Q15906 364 aa22.77■■□□□ 1.24
RNF4-209ENST00000507784 THRAP3Q9Y2W1 955 aaKnown RBP22.76■■□□□ 1.23
RNF4-209ENST00000507784 PKD1L3Q7Z443 1732 aa22.76■■□□□ 1.23
RNF4-209ENST00000507784 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.75■■□□□ 1.23
RNF4-209ENST00000507784 MPRIPQ6WCQ1 1025 aa22.75■■□□□ 1.23
RNF4-209ENST00000507784 IFNL2Q8IZJ0 200 aa22.75■■□□□ 1.23
RNF4-209ENST00000507784 MYH16Q9H6N6 1097 aa22.75■■□□□ 1.23
RNF4-209ENST00000507784 IL16Q14005 1332 aa22.75■■□□□ 1.23
RNF4-209ENST00000507784 WNK3Q9BYP7 1800 aa22.75■■□□□ 1.23
RNF4-209ENST00000507784 PLEKHG2Q9H7P9 1386 aa22.74■■□□□ 1.23
RNF4-209ENST00000507784 VIRMAQ69YN4 1812 aaKnown RBP22.73■■□□□ 1.23
RNF4-209ENST00000507784 PHKG2P15735 406 aa22.73■■□□□ 1.23
RNF4-209ENST00000507784 GNAI1P63096 354 aa22.73■■□□□ 1.23
RNF4-209ENST00000507784 DUSP27Q5VZP5 1158 aa22.73■■□□□ 1.23
RNF4-209ENST00000507784 IL17REQ8NFR9 667 aa22.73■■□□□ 1.23
RNF4-209ENST00000507784 DDX54Q8TDD1 881 aaKnown RBP22.73■■□□□ 1.23
RNF4-209ENST00000507784 LGR6Q9HBX8 967 aa22.73■■□□□ 1.23
RNF4-209ENST00000507784 EXOC5O00471 708 aa22.72■■□□□ 1.23
RNF4-209ENST00000507784 CDCA7Q9BWT1 371 aaPredicted RBP22.72■■□□□ 1.23
RNF4-209ENST00000507784 PCDH11XQ9BZA7 1347 aa22.72■■□□□ 1.23
RNF4-209ENST00000507784 PCDH11YQ9BZA8 1340 aa22.72■■□□□ 1.23
RNF4-209ENST00000507784 RNMTO43148 476 aaKnown RBP22.71■■□□□ 1.23
RNF4-209ENST00000507784 TRMT2AQ8IZ69 625 aaKnown RBP22.71■■□□□ 1.23
RNF4-209ENST00000507784 TSR2Q969E8 191 aaKnown RBP22.71■■□□□ 1.23
RNF4-209ENST00000507784 IFT57Q9NWB7 429 aa22.71■■□□□ 1.23
RNF4-209ENST00000507784 DISP2A7MBM2 1401 aa22.71■■□□□ 1.23
RNF4-209ENST00000507784 CYP27B1O15528 508 aa22.7■■□□□ 1.22
RNF4-209ENST00000507784 TRPC5Q9UL62 973 aaPredicted RBP22.7■■□□□ 1.22
RNF4-209ENST00000507784 A0A0G2JS52 829 aa22.69■■□□□ 1.22
RNF4-209ENST00000507784 HSP90AB1P08238 724 aaKnown RBP22.69■■□□□ 1.22
RNF4-209ENST00000507784 MYT1Q01538 1121 aa22.69■■□□□ 1.22
RNF4-209ENST00000507784 FAM98CQ17RN3 349 aaKnown RBP22.69■■□□□ 1.22
RNF4-209ENST00000507784 BARGINQ6ZT62 677 aa22.69■■□□□ 1.22
RNF4-209ENST00000507784 TEFQ10587 303 aa22.68■■□□□ 1.22
RNF4-209ENST00000507784 CFAP44Q96MT7 982 aa22.68■■□□□ 1.22
RNF4-209ENST00000507784 SHANK3Q9BYB0 1731 aa22.68■■□□□ 1.22
RNF4-209ENST00000507784 FANCIQ9NVI1 1328 aa22.67■■□□□ 1.22
RNF4-209ENST00000507784 DDB1Q16531 1140 aa22.67■■□□□ 1.22
RNF4-209ENST00000507784 QTRT2Q9H974 415 aaKnown RBP22.67■■□□□ 1.22
RNF4-209ENST00000507784 ZNF853P0CG23 659 aa22.66■■□□□ 1.22
RNF4-209ENST00000507784 TAF7Q15545 349 aaPredicted RBP22.66■■□□□ 1.22
RNF4-209ENST00000507784 GJD4Q96KN9 370 aaPredicted RBP22.66■■□□□ 1.22
RNF4-209ENST00000507784 MIS18AQ9NYP9 233 aa22.66■■□□□ 1.22
RNF4-209ENST00000507784 SCN11AQ9UI33 1791 aa22.66■■□□□ 1.22
RNF4-209ENST00000507784 DCAF5Q96JK2 942 aa22.65■■□□□ 1.22
RNF4-209ENST00000507784 MBIPQ9NS73 344 aa22.65■■□□□ 1.22
RNF4-209ENST00000507784 ATRNO75882 1429 aa22.65■■□□□ 1.22
RNF4-209ENST00000507784 LRRC37A3O60309 1634 aa22.64■■□□□ 1.22
RNF4-209ENST00000507784 EXOSC9Q06265 439 aaKnown RBP22.64■■□□□ 1.21
RNF4-209ENST00000507784 TSPYL4Q9UJ04 414 aa22.64■■□□□ 1.21
RNF4-209ENST00000507784 CEMIPQ8WUJ3 1361 aa22.63■■□□□ 1.21
RNF4-209ENST00000507784 CHL1O00533 1208 aa22.63■■□□□ 1.21
RNF4-209ENST00000507784 ZNF772Q68DY9 489 aaPredicted RBP22.62■■□□□ 1.21
RNF4-209ENST00000507784 KDM6AO15550 1401 aaPredicted RBP22.62■■□□□ 1.21
RNF4-209ENST00000507784 TNS2Q63HR2 1409 aa22.62■■□□□ 1.21
RNF4-209ENST00000507784 GLI3P10071 1580 aa22.61■■□□□ 1.21
RNF4-209ENST00000507784 CABP4P57796 275 aa22.61■■□□□ 1.21
RNF4-209ENST00000507784 BTBD11A6QL63 1104 aa22.6■■□□□ 1.21
RNF4-209ENST00000507784 NKX1-1Q15270 411 aaPredicted RBP22.6■■□□□ 1.21
RNF4-209ENST00000507784 RCAN3Q9UKA8 241 aa22.6■■□□□ 1.21
RNF4-209ENST00000507784 ADAMTS7Q9UKP4 1686 aa22.6■■□□□ 1.21
RNF4-209ENST00000507784 SLC52A2Q9HAB3 445 aa22.59■■□□□ 1.21
RNF4-209ENST00000507784 SUPT16HQ9Y5B9 1047 aaKnown RBP22.59■■□□□ 1.21
RNF4-209ENST00000507784 NFATC2IPQ8NCF5 419 aa22.58■■□□□ 1.21
RNF4-209ENST00000507784 BABAM1Q9NWV8 329 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms