RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 CC2D1BQ5T0F9 858 aaKnown RBP19.3■□□□□ 0.68
CCHCR1-222ENST00000507459 PSDA5PKW4 1024 aaPredicted RBP19.29■□□□□ 0.68
CCHCR1-222ENST00000507459 EIF4A2Q14240 407 aaKnown RBP19.28■□□□□ 0.68
CCHCR1-222ENST00000507459 EYA1Q99502 592 aa19.28■□□□□ 0.68
CCHCR1-222ENST00000507459 PARD3Q8TEW0 1356 aa19.27■□□□□ 0.68
CCHCR1-222ENST00000507459 PLSCR1O15162 318 aa19.26■□□□□ 0.67
CCHCR1-222ENST00000507459 R3HDM1Q15032 1099 aaKnown RBP19.25■□□□□ 0.67
CCHCR1-222ENST00000507459 SYTL4Q96C24 671 aaPredicted RBP19.24■□□□□ 0.67
CCHCR1-222ENST00000507459 NBPF14Q5TI25 921 aa19.22■□□□□ 0.67
CCHCR1-222ENST00000507459 NHSQ6T4R5 1651 aa19.21■□□□□ 0.67
CCHCR1-222ENST00000507459 PRIM1P49642 420 aaKnown RBP19.21■□□□□ 0.67
CCHCR1-222ENST00000507459 MTHFSP49914 203 aa19.21■□□□□ 0.67
CCHCR1-222ENST00000507459 PROM2Q8N271 834 aa19.21■□□□□ 0.67
CCHCR1-222ENST00000507459 PCDH11XQ9BZA7 1347 aa19.21■□□□□ 0.67
CCHCR1-222ENST00000507459 PCDH11YQ9BZA8 1340 aa19.21■□□□□ 0.67
CCHCR1-222ENST00000507459 RREB1Q92766 1687 aa19.2■□□□□ 0.66
CCHCR1-222ENST00000507459 SHANK3Q9BYB0 1731 aa19.2■□□□□ 0.66
CCHCR1-222ENST00000507459 TXNRD1Q16881 649 aa19.2■□□□□ 0.66
CCHCR1-222ENST00000507459 NCAPD2Q15021 1401 aa19.19■□□□□ 0.66
CCHCR1-222ENST00000507459 SPG7Q9UQ90 795 aa19.19■□□□□ 0.66
CCHCR1-222ENST00000507459 NUP188Q5SRE5 1749 aa19.18■□□□□ 0.66
CCHCR1-222ENST00000507459 CYP27B1O15528 508 aa19.18■□□□□ 0.66
CCHCR1-222ENST00000507459 IGSF1Q8N6C5 1336 aa19.18■□□□□ 0.66
CCHCR1-222ENST00000507459 NPC1L1Q9UHC9 1359 aa19.17■□□□□ 0.66
CCHCR1-222ENST00000507459 BTAF1O14981 1849 aa19.16■□□□□ 0.66
CCHCR1-222ENST00000507459 SRCAPQ6ZRS2 3230 aa19.16■□□□□ 0.66
CCHCR1-222ENST00000507459 RGPD3A6NKT7 1758 aaPredicted RBP19.16■□□□□ 0.66
CCHCR1-222ENST00000507459 RGPD4Q7Z3J3 1758 aa19.16■□□□□ 0.66
CCHCR1-222ENST00000507459 DOT1LQ8TEK3 1739 aa19.15■□□□□ 0.66
CCHCR1-222ENST00000507459 IL13P35225 146 aa19.15■□□□□ 0.66
CCHCR1-222ENST00000507459 AEBP1Q8IUX7 1158 aa19.15■□□□□ 0.66
CCHCR1-222ENST00000507459 SULT6B1Q6IMI4 303 aa19.14■□□□□ 0.65
CCHCR1-222ENST00000507459 ANO8Q9HCE9 1232 aaPredicted RBP19.14■□□□□ 0.65
CCHCR1-222ENST00000507459 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.14■□□□□ 0.65
CCHCR1-222ENST00000507459 PKD1L3Q7Z443 1732 aa19.12■□□□□ 0.65
CCHCR1-222ENST00000507459 MPRIPQ6WCQ1 1025 aa19.12■□□□□ 0.65
CCHCR1-222ENST00000507459 IFNL2Q8IZJ0 200 aa19.12■□□□□ 0.65
CCHCR1-222ENST00000507459 DIAPH1O60610 1272 aaKnown RBP19.11■□□□□ 0.65
CCHCR1-222ENST00000507459 PHKG2P15735 406 aa19.11■□□□□ 0.65
CCHCR1-222ENST00000507459 PLEKHO1Q53GL0 409 aaPredicted RBP19.11■□□□□ 0.65
CCHCR1-222ENST00000507459 STK32BQ9NY57 414 aa19.11■□□□□ 0.65
CCHCR1-222ENST00000507459 NKX1-1Q15270 411 aaPredicted RBP19.1■□□□□ 0.65
CCHCR1-222ENST00000507459 HMOX1P09601 288 aa19.09■□□□□ 0.65
CCHCR1-222ENST00000507459 KCNQ4P56696 695 aa19.09■□□□□ 0.65
CCHCR1-222ENST00000507459 LRRC4BQ9NT99 713 aa19.09■□□□□ 0.65
CCHCR1-222ENST00000507459 AMOTQ4VCS5 1084 aa19.08■□□□□ 0.64
CCHCR1-222ENST00000507459 ZNF530Q6P9A1 599 aaPredicted RBP19.08■□□□□ 0.64
CCHCR1-222ENST00000507459 SLC15A2Q16348 729 aa19.07■□□□□ 0.64
CCHCR1-222ENST00000507459 U2SURPO15042 1029 aaKnown RBP19.06■□□□□ 0.64
CCHCR1-222ENST00000507459 SLC27A3Q5K4L6 730 aa19.06■□□□□ 0.64
CCHCR1-222ENST00000507459 KDRP35968 1356 aa19.06■□□□□ 0.64
CCHCR1-222ENST00000507459 TOGARAM1Q9Y4F4 1720 aa19.05■□□□□ 0.64
CCHCR1-222ENST00000507459 PPP2R1AP30153 589 aa19.05■□□□□ 0.64
CCHCR1-222ENST00000507459 PIGBQ92521 554 aa19.05■□□□□ 0.64
CCHCR1-222ENST00000507459 CFAP53Q96M91 514 aa19.05■□□□□ 0.64
CCHCR1-222ENST00000507459 PDGFDQ9GZP0 370 aaPredicted RBP19.05■□□□□ 0.64
CCHCR1-222ENST00000507459 TMOD3Q9NYL9 352 aa19.05■□□□□ 0.64
CCHCR1-222ENST00000507459 CCNL1Q9UK58 526 aaPredicted RBP19.05■□□□□ 0.64
CCHCR1-222ENST00000507459 PLEKHG2Q9H7P9 1386 aa19.05■□□□□ 0.64
CCHCR1-222ENST00000507459 ZEB1P37275 1124 aaPredicted RBP19.04■□□□□ 0.64
CCHCR1-222ENST00000507459 DDX10Q13206 875 aaKnown RBP19.04■□□□□ 0.64
CCHCR1-222ENST00000507459 C1orf141Q5JVX7 400 aa19.04■□□□□ 0.64
CCHCR1-222ENST00000507459 ITGB4P16144 1822 aa19.03■□□□□ 0.64
CCHCR1-222ENST00000507459 HSP90AB1P08238 724 aaKnown RBP19.03■□□□□ 0.64
CCHCR1-222ENST00000507459 ZNF827Q17R98 1081 aa19.03■□□□□ 0.64
CCHCR1-222ENST00000507459 PALLDQ8WX93 1383 aa19.03■□□□□ 0.64
CCHCR1-222ENST00000507459 DCAF5Q96JK2 942 aa19.02■□□□□ 0.64
CCHCR1-222ENST00000507459 COL3A1P02461 1466 aaPredicted RBP19.02■□□□□ 0.63
CCHCR1-222ENST00000507459 SMARCC1Q92922 1105 aaPredicted RBP19.01■□□□□ 0.63
CCHCR1-222ENST00000507459 LRP5O75197 1615 aa19■□□□□ 0.63
CCHCR1-222ENST00000507459 LY75O60449 1722 aa19■□□□□ 0.63
CCHCR1-222ENST00000507459 ZBTB7AO95365 584 aa19■□□□□ 0.63
CCHCR1-222ENST00000507459 AKT1S1Q96B36 256 aa19■□□□□ 0.63
CCHCR1-222ENST00000507459 SPON1Q9HCB6 807 aa19■□□□□ 0.63
CCHCR1-222ENST00000507459 ASAP1Q9ULH1 1129 aa19■□□□□ 0.63
CCHCR1-222ENST00000507459 ERVV-2B6SEH9 535 aa18.99■□□□□ 0.63
CCHCR1-222ENST00000507459 CABP4P57796 275 aa18.99■□□□□ 0.63
CCHCR1-222ENST00000507459 TFCP2L1Q9NZI6 479 aa18.99■□□□□ 0.63
CCHCR1-222ENST00000507459 PAPPAQ13219 1627 aa18.99■□□□□ 0.63
CCHCR1-222ENST00000507459 NUDCQ9Y266 331 aa18.98■□□□□ 0.63
CCHCR1-222ENST00000507459 ATF5Q9Y2D1 282 aaPredicted RBP18.98■□□□□ 0.63
CCHCR1-222ENST00000507459 KDM6AO15550 1401 aaPredicted RBP18.98■□□□□ 0.63
CCHCR1-222ENST00000507459 MTHFSDQ2M296 383 aaKnown RBP18.97■□□□□ 0.63
CCHCR1-222ENST00000507459 AKAP4Q5JQC9 854 aa18.97■□□□□ 0.63
CCHCR1-222ENST00000507459 ATG3Q9NT62 314 aa18.97■□□□□ 0.63
CCHCR1-222ENST00000507459 PPP1R1BQ9UD71 204 aaPredicted RBP18.96■□□□□ 0.63
CCHCR1-222ENST00000507459 CASZ1Q86V15 1759 aa18.96■□□□□ 0.63
CCHCR1-222ENST00000507459 LOC102724428A0A0B4J2F2 783 aa18.95■□□□□ 0.62
CCHCR1-222ENST00000507459 U2AF1L5P0DN76 240 aaPredicted RBP18.95■□□□□ 0.62
CCHCR1-222ENST00000507459 SIK1P57059 783 aa18.95■□□□□ 0.62
CCHCR1-222ENST00000507459 U2AF1Q01081 240 aaKnown RBP eCLIP18.95■□□□□ 0.62
CCHCR1-222ENST00000507459 NFATC2IPQ8NCF5 419 aa18.95■□□□□ 0.62
CCHCR1-222ENST00000507459 LGR6Q9HBX8 967 aa18.94■□□□□ 0.62
CCHCR1-222ENST00000507459 PRKAR2BP31323 418 aa18.93■□□□□ 0.62
CCHCR1-222ENST00000507459 ATP6V1AP38606 617 aa18.93■□□□□ 0.62
CCHCR1-222ENST00000507459 RBM42Q9BTD8 480 aaKnown RBP18.93■□□□□ 0.62
CCHCR1-222ENST00000507459 PNPLA7Q6ZV29 1317 aa18.93■□□□□ 0.62
CCHCR1-222ENST00000507459 RNMTO43148 476 aaKnown RBP18.92■□□□□ 0.62
CCHCR1-222ENST00000507459 MSH5O43196 834 aa18.92■□□□□ 0.62
CCHCR1-222ENST00000507459 HMGB2P26583 209 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms