RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 MAP7D1Q3KQU3 841 aa6.47□□□□□ -1.37
LSM6-205ENST00000507449 EHBP1Q8NDI1 1231 aa6.47□□□□□ -1.37
LSM6-205ENST00000507449 KCTD15Q96SI1 283 aaPredicted RBP6.47□□□□□ -1.37
LSM6-205ENST00000507449 DOLKQ9UPQ8 538 aa6.47□□□□□ -1.37
LSM6-205ENST00000507449 MAP4K5Q9Y4K4 846 aa6.47□□□□□ -1.37
LSM6-205ENST00000507449 TLL2Q9Y6L7 1015 aa6.47□□□□□ -1.37
LSM6-205ENST00000507449 ACIN1Q9UKV3 1341 aaKnown RBP6.47□□□□□ -1.37
LSM6-205ENST00000507449 GRM5P41594 1212 aa6.46□□□□□ -1.38
LSM6-205ENST00000507449 PTK7Q13308 1070 aa6.46□□□□□ -1.38
LSM6-205ENST00000507449 ELOAQ14241 798 aaKnown RBP6.46□□□□□ -1.38
LSM6-205ENST00000507449 NBPF20Q3BBV1 942 aa6.46□□□□□ -1.38
LSM6-205ENST00000507449 INTS6LQ5JSJ4 861 aaKnown RBP6.46□□□□□ -1.38
LSM6-205ENST00000507449 STK32AQ8WU08 396 aa6.46□□□□□ -1.38
LSM6-205ENST00000507449 CDK15Q96Q40 435 aa6.46□□□□□ -1.38
LSM6-205ENST00000507449 CDV3Q9UKY7 258 aaKnown RBP6.46□□□□□ -1.38
LSM6-205ENST00000507449 FAM196BA6NMK8 535 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 USP17L15C9J2P7 530 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 USP17L10C9JJH3 530 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 USP17L13C9JLJ4 530 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 USP17L12C9JPN9 530 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 USP17L11C9JVI0 530 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 USP17L21D6R901 530 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 USP17L18D6R9N7 530 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 USP17L22D6RA61 530 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 USP17L17D6RBQ6 530 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 USP17L19D6RCP7 530 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 USP17L20D6RJB6 530 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 LZTS3O60299 673 aaPredicted RBP6.45□□□□□ -1.38
LSM6-205ENST00000507449 DKK1O94907 266 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 CLDN10P78369 228 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 USP17L24Q0WX57 530 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 EML3Q32P44 896 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 OXLD1Q5BKU9 147 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 VASH1Q7L8A9 365 aaPredicted RBP6.45□□□□□ -1.38
LSM6-205ENST00000507449 KIAA1024Q9UPX6 916 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 USTQ9Y2C2 406 aa6.45□□□□□ -1.38
LSM6-205ENST00000507449 ATP5J2-PTCD1G3V325 749 aa6.44□□□□□ -1.38
LSM6-205ENST00000507449 WNT7AO00755 349 aa6.44□□□□□ -1.38
LSM6-205ENST00000507449 ZBTB7BO15156 539 aaPredicted RBP6.44□□□□□ -1.38
LSM6-205ENST00000507449 GDF11O95390 407 aa6.44□□□□□ -1.38
LSM6-205ENST00000507449 IGHA1P01876 353 aa6.44□□□□□ -1.38
LSM6-205ENST00000507449 CSB-PGBD3P0DP91 1061 aa6.44□□□□□ -1.38
LSM6-205ENST00000507449 RAB15P59190 212 aa6.44□□□□□ -1.38
LSM6-205ENST00000507449 TMEM164Q5U3C3 297 aa6.44□□□□□ -1.38
LSM6-205ENST00000507449 RNF20Q5VTR2 975 aa6.44□□□□□ -1.38
LSM6-205ENST00000507449 SEPT12Q8IYM1 358 aa6.44□□□□□ -1.38
LSM6-205ENST00000507449 MPNDQ8N594 471 aa6.44□□□□□ -1.38
LSM6-205ENST00000507449 MRGPRX2Q96LB1 330 aa6.44□□□□□ -1.38
LSM6-205ENST00000507449 NOVA2Q9UNW9 492 aaKnown RBP6.44□□□□□ -1.38
LSM6-205ENST00000507449 PCDHB11Q9Y5F2 797 aa6.44□□□□□ -1.38
LSM6-205ENST00000507449 ERVH48-1M5A8F1 160 aa6.43□□□□□ -1.38
LSM6-205ENST00000507449 RASA1P20936 1047 aa6.43□□□□□ -1.38
LSM6-205ENST00000507449 FSHRP23945 695 aa6.43□□□□□ -1.38
LSM6-205ENST00000507449 SCTRP47872 440 aa6.43□□□□□ -1.38
LSM6-205ENST00000507449 ARID5BQ14865 1188 aa6.43□□□□□ -1.38
LSM6-205ENST00000507449 OGFOD1Q8N543 542 aa6.43□□□□□ -1.38
LSM6-205ENST00000507449 SLAIN2Q9P270 581 aa6.43□□□□□ -1.38
LSM6-205ENST00000507449 PCDHGA11Q9Y5H2 935 aa6.43□□□□□ -1.38
LSM6-205ENST00000507449 LORP23490 312 aaPredicted RBP6.42□□□□□ -1.38
LSM6-205ENST00000507449 FAM69CQ0P6D2 419 aa6.42□□□□□ -1.38
LSM6-205ENST00000507449 NOD1Q9Y239 953 aa6.42□□□□□ -1.38
LSM6-205ENST00000507449 ADH1CP00326 375 aa6.41□□□□□ -1.38
LSM6-205ENST00000507449 NR3C2P08235 984 aa6.41□□□□□ -1.38
LSM6-205ENST00000507449 GTF2IP78347 998 aa6.41□□□□□ -1.38
LSM6-205ENST00000507449 XP32Q5T750 250 aa6.41□□□□□ -1.38
LSM6-205ENST00000507449 LARP1Q6PKG0 1096 aaKnown RBP6.41□□□□□ -1.38
LSM6-205ENST00000507449 SNIP1Q8TAD8 396 aaKnown RBP6.41□□□□□ -1.38
LSM6-205ENST00000507449 ZNF594Q96JF6 807 aaPredicted RBP6.41□□□□□ -1.38
LSM6-205ENST00000507449 TMPRSS4Q9NRS4 437 aa6.41□□□□□ -1.38
LSM6-205ENST00000507449 DNAAF2Q9NVR5 837 aaKnown RBP6.41□□□□□ -1.38
LSM6-205ENST00000507449 ERVK-9P63128 1117 aa6.4□□□□□ -1.38
LSM6-205ENST00000507449 DPYDQ12882 1025 aa6.4□□□□□ -1.38
LSM6-205ENST00000507449 TRIM50Q86XT4 487 aa6.4□□□□□ -1.38
LSM6-205ENST00000507449 CCDC125Q86Z20 511 aa6.4□□□□□ -1.38
LSM6-205ENST00000507449 ANKMY2Q8IV38 441 aa6.4□□□□□ -1.38
LSM6-205ENST00000507449 SIX5Q8N196 739 aa6.4□□□□□ -1.38
LSM6-205ENST00000507449 LILRA1O75019 489 aa6.39□□□□□ -1.39
LSM6-205ENST00000507449 USP4Q13107 963 aa6.39□□□□□ -1.39
LSM6-205ENST00000507449 LARGE2Q8N3Y3 721 aa6.39□□□□□ -1.39
LSM6-205ENST00000507449 ZNF784Q8NCA9 323 aaPredicted RBP6.39□□□□□ -1.39
LSM6-205ENST00000507449 H3BM21 787 aa6.38□□□□□ -1.39
LSM6-205ENST00000507449 STAU1O95793 577 aaKnown RBP6.38□□□□□ -1.39
LSM6-205ENST00000507449 ATP1A2P50993 1020 aa6.38□□□□□ -1.39
LSM6-205ENST00000507449 RASSF7Q02833 373 aa6.38□□□□□ -1.39
LSM6-205ENST00000507449 PPP1R26Q5T8A7 1209 aaPredicted RBP6.38□□□□□ -1.39
LSM6-205ENST00000507449 PHLDB3Q6NSJ2 640 aa6.38□□□□□ -1.39
LSM6-205ENST00000507449 AEBP1Q8IUX7 1158 aa6.38□□□□□ -1.39
LSM6-205ENST00000507449 CCDC116Q8IYX3 515 aa6.38□□□□□ -1.39
LSM6-205ENST00000507449 TPCN2Q8NHX9 752 aa6.38□□□□□ -1.39
LSM6-205ENST00000507449 OSBPL3Q9H4L5 887 aa6.38□□□□□ -1.39
LSM6-205ENST00000507449 CYLDQ9NQC7 956 aa6.38□□□□□ -1.39
LSM6-205ENST00000507449 ADD1P35611 737 aaKnown RBP6.37□□□□□ -1.39
LSM6-205ENST00000507449 FOXK2Q01167 660 aa6.37□□□□□ -1.39
LSM6-205ENST00000507449 PDE4CQ08493 712 aa6.37□□□□□ -1.39
LSM6-205ENST00000507449 NR5A1Q13285 461 aa6.37□□□□□ -1.39
LSM6-205ENST00000507449 CCDC102BQ68D86 513 aa6.37□□□□□ -1.39
LSM6-205ENST00000507449 CC2D2BQ6DHV5 1058 aa6.37□□□□□ -1.39
LSM6-205ENST00000507449 FAM200AQ8TCP9 573 aa6.37□□□□□ -1.39
LSM6-205ENST00000507449 SFI1A8K8P3 1242 aa6.36□□□□□ -1.39
LSM6-205ENST00000507449 TMEM229AB2RXF0 380 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms