RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 SLC16A10Q8TF71 515 aa18.92■□□□□ 0.62
POLR2J3-212ENST00000507355 SYTL4Q96C24 671 aaPredicted RBP18.92■□□□□ 0.62
POLR2J3-212ENST00000507355 DOT1LQ8TEK3 1739 aa18.91■□□□□ 0.62
POLR2J3-212ENST00000507355 ST20-MTHFSA0A0A6YYL1 179 aa18.9■□□□□ 0.62
POLR2J3-212ENST00000507355 LTV1Q96GA3 475 aaPredicted RBP18.9■□□□□ 0.62
POLR2J3-212ENST00000507355 EDC4Q6P2E9 1401 aaKnown RBP18.9■□□□□ 0.62
POLR2J3-212ENST00000507355 IFFO2Q5TF58 517 aa18.89■□□□□ 0.61
POLR2J3-212ENST00000507355 TESK2Q96S53 571 aa18.89■□□□□ 0.61
POLR2J3-212ENST00000507355 A0A1W2PP64 1363 aa18.89■□□□□ 0.61
POLR2J3-212ENST00000507355 YBX3P16989 372 aaKnown RBP eCLIP18.87■□□□□ 0.61
POLR2J3-212ENST00000507355 FAM208AQ9UK61 1670 aaKnown RBP18.87■□□□□ 0.61
POLR2J3-212ENST00000507355 PRIM1P49642 420 aaKnown RBP18.86■□□□□ 0.61
POLR2J3-212ENST00000507355 LY75O60449 1722 aa18.86■□□□□ 0.61
POLR2J3-212ENST00000507355 ANKRD36BQ8N2N9 1353 aa18.85■□□□□ 0.61
POLR2J3-212ENST00000507355 SLC24A1O60721 1099 aa18.85■□□□□ 0.61
POLR2J3-212ENST00000507355 IP6K1Q92551 441 aa18.85■□□□□ 0.61
POLR2J3-212ENST00000507355 NSD2O96028 1365 aa18.84■□□□□ 0.61
POLR2J3-212ENST00000507355 MSL1Q68DK7 614 aa18.83■□□□□ 0.6
POLR2J3-212ENST00000507355 CCNL1Q9UK58 526 aaPredicted RBP18.83■□□□□ 0.6
POLR2J3-212ENST00000507355 GRIN3BO60391 1043 aa18.82■□□□□ 0.6
POLR2J3-212ENST00000507355 FBLN1P23142 703 aa18.82■□□□□ 0.6
POLR2J3-212ENST00000507355 TRIM26Q12899 539 aaPredicted RBP18.82■□□□□ 0.6
POLR2J3-212ENST00000507355 COG3Q96JB2 828 aa18.82■□□□□ 0.6
POLR2J3-212ENST00000507355 RGPD2P0DJD1 1756 aa18.82■□□□□ 0.6
POLR2J3-212ENST00000507355 ATP10DQ9P241 1426 aa18.82■□□□□ 0.6
POLR2J3-212ENST00000507355 COL23A1Q86Y22 540 aaPredicted RBP18.8■□□□□ 0.6
POLR2J3-212ENST00000507355 MEGF6O75095 1541 aa18.79■□□□□ 0.6
POLR2J3-212ENST00000507355 MAP3K19Q56UN5 1328 aa18.78■□□□□ 0.6
POLR2J3-212ENST00000507355 AMPHP49418 695 aa18.78■□□□□ 0.6
POLR2J3-212ENST00000507355 ZCRB1Q8TBF4 217 aaKnown RBP18.78■□□□□ 0.6
POLR2J3-212ENST00000507355 USP47Q96K76 1375 aa18.78■□□□□ 0.6
POLR2J3-212ENST00000507355 C5P01031 1676 aa18.77■□□□□ 0.6
POLR2J3-212ENST00000507355 HOXC9P31274 260 aa18.77■□□□□ 0.6
POLR2J3-212ENST00000507355 TMF1P82094 1093 aa18.77■□□□□ 0.6
POLR2J3-212ENST00000507355 ZNF526Q8TF50 670 aaPredicted RBP18.77■□□□□ 0.6
POLR2J3-212ENST00000507355 FYB1O15117 783 aa18.75■□□□□ 0.59
POLR2J3-212ENST00000507355 GGNBP2Q9H3C7 697 aa18.75■□□□□ 0.59
POLR2J3-212ENST00000507355 GPBP1L1Q9HC44 474 aaPredicted RBP18.75■□□□□ 0.59
POLR2J3-212ENST00000507355 RRS1Q15050 365 aaKnown RBP18.73■□□□□ 0.59
POLR2J3-212ENST00000507355 USHBP1Q8N6Y0 703 aa18.73■□□□□ 0.59
POLR2J3-212ENST00000507355 WWC3Q9ULE0 1092 aa18.73■□□□□ 0.59
POLR2J3-212ENST00000507355 CD2APQ9Y5K6 639 aa18.71■□□□□ 0.59
POLR2J3-212ENST00000507355 TAF1LQ8IZX4 1826 aa18.71■□□□□ 0.59
POLR2J3-212ENST00000507355 ADCY9O60503 1353 aa18.7■□□□□ 0.58
POLR2J3-212ENST00000507355 HSPA6P17066 643 aa18.7■□□□□ 0.58
POLR2J3-212ENST00000507355 NBPF6Q5VWK0 638 aa18.7■□□□□ 0.58
POLR2J3-212ENST00000507355 NBPF4Q96M43 638 aa18.7■□□□□ 0.58
POLR2J3-212ENST00000507355 CDCA8Q53HL2 280 aa18.69■□□□□ 0.58
POLR2J3-212ENST00000507355 RAPGEF4Q8WZA2 1011 aa18.69■□□□□ 0.58
POLR2J3-212ENST00000507355 PALLDQ8WX93 1383 aa18.68■□□□□ 0.58
POLR2J3-212ENST00000507355 RTL1A6NKG5 1358 aa18.68■□□□□ 0.58
POLR2J3-212ENST00000507355 SMG6Q86US8 1419 aaKnown RBP18.67■□□□□ 0.58
POLR2J3-212ENST00000507355 C4BP0C0L5 1744 aa18.67■□□□□ 0.58
POLR2J3-212ENST00000507355 MPRIPQ6WCQ1 1025 aa18.67■□□□□ 0.58
POLR2J3-212ENST00000507355 IGSF1Q8N6C5 1336 aa18.67■□□□□ 0.58
POLR2J3-212ENST00000507355 TOGARAM1Q9Y4F4 1720 aa18.66■□□□□ 0.58
POLR2J3-212ENST00000507355 PHF14O94880 888 aa18.66■□□□□ 0.58
POLR2J3-212ENST00000507355 TATP17735 454 aaPredicted RBP18.66■□□□□ 0.58
POLR2J3-212ENST00000507355 FLAD1Q8NFF5 587 aa18.66■□□□□ 0.58
POLR2J3-212ENST00000507355 AK7Q96M32 723 aa18.66■□□□□ 0.58
POLR2J3-212ENST00000507355 CGNL1Q0VF96 1302 aa18.66■□□□□ 0.58
POLR2J3-212ENST00000507355 HSP90AB2PQ58FF8 381 aa18.65■□□□□ 0.58
POLR2J3-212ENST00000507355 SMIM5Q71RC9 77 aa18.65■□□□□ 0.58
POLR2J3-212ENST00000507355 AMIGO3Q86WK7 504 aa18.65■□□□□ 0.58
POLR2J3-212ENST00000507355 CARD14Q9BXL6 1004 aa18.65■□□□□ 0.58
POLR2J3-212ENST00000507355 PCDH11XQ9BZA7 1347 aa18.65■□□□□ 0.58
POLR2J3-212ENST00000507355 PCDH11YQ9BZA8 1340 aa18.65■□□□□ 0.58
POLR2J3-212ENST00000507355 ITGB4P16144 1822 aa18.63■□□□□ 0.57
POLR2J3-212ENST00000507355 UBR3Q6ZT12 1888 aa18.63■□□□□ 0.57
POLR2J3-212ENST00000507355 TIMELESSQ9UNS1 1208 aa18.63■□□□□ 0.57
POLR2J3-212ENST00000507355 INSRP06213 1382 aa18.62■□□□□ 0.57
POLR2J3-212ENST00000507355 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.6■□□□□ 0.57
POLR2J3-212ENST00000507355 HMGB2P26583 209 aaKnown RBP18.6■□□□□ 0.57
POLR2J3-212ENST00000507355 PCGF6Q9BYE7 350 aa18.6■□□□□ 0.57
POLR2J3-212ENST00000507355 EMILIN1Q9Y6C2 1016 aa18.6■□□□□ 0.57
POLR2J3-212ENST00000507355 FLT4P35916 1363 aa18.59■□□□□ 0.57
POLR2J3-212ENST00000507355 CYP27B1O15528 508 aa18.59■□□□□ 0.57
POLR2J3-212ENST00000507355 SMARCC1Q92922 1105 aaPredicted RBP18.59■□□□□ 0.57
POLR2J3-212ENST00000507355 KIF20BQ96Q89 1820 aa18.58■□□□□ 0.57
POLR2J3-212ENST00000507355 KIF24Q5T7B8 1368 aa18.58■□□□□ 0.57
POLR2J3-212ENST00000507355 KIF3CO14782 793 aa18.58■□□□□ 0.56
POLR2J3-212ENST00000507355 NSD3Q9BZ95 1437 aa18.57■□□□□ 0.56
POLR2J3-212ENST00000507355 PPM1GO15355 546 aaPredicted RBP18.57■□□□□ 0.56
POLR2J3-212ENST00000507355 PKD1L3Q7Z443 1732 aa18.57■□□□□ 0.56
POLR2J3-212ENST00000507355 LINC00116Q8NCU8 138 aa18.56■□□□□ 0.56
POLR2J3-212ENST00000507355 PIGBQ92521 554 aa18.56■□□□□ 0.56
POLR2J3-212ENST00000507355 SSFA2P28290 1259 aa18.55■□□□□ 0.56
POLR2J3-212ENST00000507355 POLR3GLQ9BT43 218 aa18.55■□□□□ 0.56
POLR2J3-212ENST00000507355 CICQ96RK0 1608 aaPredicted RBP18.55■□□□□ 0.56
POLR2J3-212ENST00000507355 CLSPNQ9HAW4 1339 aa18.54■□□□□ 0.56
POLR2J3-212ENST00000507355 MAP2P11137 1827 aaKnown RBP18.54■□□□□ 0.56
POLR2J3-212ENST00000507355 GNPATO15228 680 aa18.54■□□□□ 0.56
POLR2J3-212ENST00000507355 LOC102724428A0A0B4J2F2 783 aa18.53■□□□□ 0.56
POLR2J3-212ENST00000507355 SIK1P57059 783 aa18.53■□□□□ 0.56
POLR2J3-212ENST00000507355 N4BP2Q86UW6 1770 aaPredicted RBP18.53■□□□□ 0.56
POLR2J3-212ENST00000507355 PXDNLA1KZ92 1463 aa18.52■□□□□ 0.56
POLR2J3-212ENST00000507355 WASHC2AQ641Q2 1341 aa18.52■□□□□ 0.56
POLR2J3-212ENST00000507355 MMP10P09238 476 aa18.52■□□□□ 0.56
POLR2J3-212ENST00000507355 APLP1P51693 650 aa18.52■□□□□ 0.56
POLR2J3-212ENST00000507355 EYA1Q99502 592 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms