RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 NLGN2Q8NFZ4 835 aa23.38■■□□□ 1.33
SNF8-205ENST00000507302 CARD11Q9BXL7 1154 aa23.38■■□□□ 1.33
SNF8-205ENST00000507302 TFCP2L1Q9NZI6 479 aa23.38■■□□□ 1.33
SNF8-205ENST00000507302 MEGF6O75095 1541 aa23.38■■□□□ 1.33
SNF8-205ENST00000507302 MAP3K19Q56UN5 1328 aa23.37■■□□□ 1.33
SNF8-205ENST00000507302 HOXC9P31274 260 aa23.36■■□□□ 1.33
SNF8-205ENST00000507302 KCNQ4P56696 695 aa23.36■■□□□ 1.33
SNF8-205ENST00000507302 GIGYF1O75420 1035 aaPredicted RBP23.35■■□□□ 1.33
SNF8-205ENST00000507302 C5P01031 1676 aa23.35■■□□□ 1.33
SNF8-205ENST00000507302 TAF1LQ8IZX4 1826 aa23.34■■□□□ 1.33
SNF8-205ENST00000507302 ZCRB1Q8TBF4 217 aaKnown RBP23.34■■□□□ 1.33
SNF8-205ENST00000507302 RTL1A6NKG5 1358 aa23.33■■□□□ 1.33
SNF8-205ENST00000507302 YBX3P16989 372 aaKnown RBP eCLIP23.33■■□□□ 1.337e-7■□□□□ 10.8
SNF8-205ENST00000507302 GRIN3BO60391 1043 aa23.32■■□□□ 1.32
SNF8-205ENST00000507302 COL23A1Q86Y22 540 aaPredicted RBP23.32■■□□□ 1.32
SNF8-205ENST00000507302 LTV1Q96GA3 475 aaPredicted RBP23.32■■□□□ 1.32
SNF8-205ENST00000507302 TESK2Q96S53 571 aa23.32■■□□□ 1.32
SNF8-205ENST00000507302 CGNL1Q0VF96 1302 aa23.32■■□□□ 1.32
SNF8-205ENST00000507302 SYTL4Q96C24 671 aaPredicted RBP23.31■■□□□ 1.32
SNF8-205ENST00000507302 CCNL1Q9UK58 526 aaPredicted RBP23.31■■□□□ 1.32
SNF8-205ENST00000507302 KLHL34Q8N239 644 aa23.3■■□□□ 1.32
SNF8-205ENST00000507302 COG3Q96JB2 828 aa23.3■■□□□ 1.32
SNF8-205ENST00000507302 USP47Q96K76 1375 aa23.28■■□□□ 1.32
SNF8-205ENST00000507302 FBLN1P23142 703 aa23.28■■□□□ 1.32
SNF8-205ENST00000507302 NBPF6Q5VWK0 638 aa23.27■■□□□ 1.32
SNF8-205ENST00000507302 NBPF4Q96M43 638 aa23.27■■□□□ 1.32
SNF8-205ENST00000507302 AMPHP49418 695 aa23.26■■□□□ 1.31
SNF8-205ENST00000507302 PELP1Q8IZL8 1130 aaKnown RBP23.26■■□□□ 1.31
SNF8-205ENST00000507302 ADCY9O60503 1353 aa23.26■■□□□ 1.31
SNF8-205ENST00000507302 TOGARAM1Q9Y4F4 1720 aa23.25■■□□□ 1.31
SNF8-205ENST00000507302 CD2APQ9Y5K6 639 aa23.25■■□□□ 1.31
SNF8-205ENST00000507302 HMGB2P26583 209 aaKnown RBP23.24■■□□□ 1.31
SNF8-205ENST00000507302 IFFO2Q5TF58 517 aa23.24■■□□□ 1.31
SNF8-205ENST00000507302 ITGB4P16144 1822 aa23.24■■□□□ 1.31
SNF8-205ENST00000507302 SLC24A1O60721 1099 aa23.23■■□□□ 1.31
SNF8-205ENST00000507302 UBR3Q6ZT12 1888 aa23.23■■□□□ 1.31
SNF8-205ENST00000507302 ATP10DQ9P241 1426 aa23.23■■□□□ 1.31
SNF8-205ENST00000507302 C4BP0C0L5 1744 aa23.22■■□□□ 1.31
SNF8-205ENST00000507302 FLAD1Q8NFF5 587 aa23.22■■□□□ 1.31
SNF8-205ENST00000507302 PKD1L3Q7Z443 1732 aa23.22■■□□□ 1.31
SNF8-205ENST00000507302 FYB1O15117 783 aa23.21■■□□□ 1.31
SNF8-205ENST00000507302 INSRP06213 1382 aa23.21■■□□□ 1.31
SNF8-205ENST00000507302 KIF24Q5T7B8 1368 aa23.21■■□□□ 1.31
SNF8-205ENST00000507302 MAP2P11137 1827 aaKnown RBP23.21■■□□□ 1.31
SNF8-205ENST00000507302 ST20-MTHFSA0A0A6YYL1 179 aa23.2■■□□□ 1.3
SNF8-205ENST00000507302 NCAPD2Q15021 1401 aa23.19■■□□□ 1.3
SNF8-205ENST00000507302 PALLDQ8WX93 1383 aa23.19■■□□□ 1.3
SNF8-205ENST00000507302 PCDH11XQ9BZA7 1347 aa23.19■■□□□ 1.3
SNF8-205ENST00000507302 PCDH11YQ9BZA8 1340 aa23.19■■□□□ 1.3
SNF8-205ENST00000507302 RRS1Q15050 365 aaKnown RBP23.19■■□□□ 1.3
SNF8-205ENST00000507302 SMG6Q86US8 1419 aaKnown RBP23.18■■□□□ 1.3
SNF8-205ENST00000507302 MSL1Q68DK7 614 aa23.18■■□□□ 1.3
SNF8-205ENST00000507302 RAPGEF4Q8WZA2 1011 aa23.18■■□□□ 1.3
SNF8-205ENST00000507302 KIF20BQ96Q89 1820 aa23.17■■□□□ 1.3
SNF8-205ENST00000507302 MSH5O43196 834 aa23.17■■□□□ 1.3
SNF8-205ENST00000507302 USHBP1Q8N6Y0 703 aa23.17■■□□□ 1.3
SNF8-205ENST00000507302 CYP27B1O15528 508 aa23.16■■□□□ 1.3
SNF8-205ENST00000507302 TATP17735 454 aaPredicted RBP23.16■■□□□ 1.3
SNF8-205ENST00000507302 TONSLQ96HA7 1378 aa23.15■■□□□ 1.3
SNF8-205ENST00000507302 AMIGO3Q86WK7 504 aa23.15■■□□□ 1.3
SNF8-205ENST00000507302 FLT4P35916 1363 aa23.14■■□□□ 1.3
SNF8-205ENST00000507302 ANKRD26Q9UPS8 1709 aa23.14■■□□□ 1.3
SNF8-205ENST00000507302 HSP90AB2PQ58FF8 381 aa23.14■■□□□ 1.29
SNF8-205ENST00000507302 CICQ96RK0 1608 aaPredicted RBP23.13■■□□□ 1.29
SNF8-205ENST00000507302 NKX1-1Q15270 411 aaPredicted RBP23.13■■□□□ 1.29
SNF8-205ENST00000507302 GGNBP2Q9H3C7 697 aa23.13■■□□□ 1.29
SNF8-205ENST00000507302 SMARCC1Q92922 1105 aaPredicted RBP23.12■■□□□ 1.29
SNF8-205ENST00000507302 NSD3Q9BZ95 1437 aa23.12■■□□□ 1.29
SNF8-205ENST00000507302 KIF13BQ9NQT8 1826 aa23.1■■□□□ 1.29
SNF8-205ENST00000507302 MPRIPQ6WCQ1 1025 aa23.1■■□□□ 1.29
SNF8-205ENST00000507302 GPBP1L1Q9HC44 474 aaPredicted RBP23.1■■□□□ 1.29
SNF8-205ENST00000507302 HSPA6P17066 643 aa23.09■■□□□ 1.29
SNF8-205ENST00000507302 KIAA1551Q9HCM1 1747 aa23.08■■□□□ 1.29
SNF8-205ENST00000507302 PIGBQ92521 554 aa23.08■■□□□ 1.29
SNF8-205ENST00000507302 SSFA2P28290 1259 aa23.07■■□□□ 1.28
SNF8-205ENST00000507302 IGSF1Q8N6C5 1336 aa23.07■■□□□ 1.28
SNF8-205ENST00000507302 AK7Q96M32 723 aa23.06■■□□□ 1.28
SNF8-205ENST00000507302 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.05■■□□□ 1.28
SNF8-205ENST00000507302 ZNF831Q5JPB2 1677 aa23.05■■□□□ 1.28
SNF8-205ENST00000507302 TMF1P82094 1093 aa23.04■■□□□ 1.28
SNF8-205ENST00000507302 LOC102724428A0A0B4J2F2 783 aa23.03■■□□□ 1.28
SNF8-205ENST00000507302 SIK1P57059 783 aa23.03■■□□□ 1.28
SNF8-205ENST00000507302 LINC00116Q8NCU8 138 aa23.03■■□□□ 1.28
SNF8-205ENST00000507302 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.03■■□□□ 1.28
SNF8-205ENST00000507302 KIF3CO14782 793 aa23.02■■□□□ 1.28
SNF8-205ENST00000507302 SMIM5Q71RC9 77 aa23.02■■□□□ 1.28
SNF8-205ENST00000507302 PLEKHG2Q9H7P9 1386 aa23.01■■□□□ 1.27
SNF8-205ENST00000507302 CARD14Q9BXL6 1004 aa23.01■■□□□ 1.27
SNF8-205ENST00000507302 EMILIN1Q9Y6C2 1016 aa23.01■■□□□ 1.27
SNF8-205ENST00000507302 ITPK1Q13572 414 aa22.99■■□□□ 1.27
SNF8-205ENST00000507302 SPG7Q9UQ90 795 aa22.99■■□□□ 1.27
SNF8-205ENST00000507302 WASHC2AQ641Q2 1341 aa22.99■■□□□ 1.27
SNF8-205ENST00000507302 PXDNLA1KZ92 1463 aa22.98■■□□□ 1.27
SNF8-205ENST00000507302 BRCA1P38398 1863 aaKnown RBP22.98■■□□□ 1.27
SNF8-205ENST00000507302 PHF14O94880 888 aa22.98■■□□□ 1.27
SNF8-205ENST00000507302 KDRP35968 1356 aa22.97■■□□□ 1.27
SNF8-205ENST00000507302 COL5A3P25940 1745 aaPredicted RBP22.96■■□□□ 1.27
SNF8-205ENST00000507302 CDCA8Q53HL2 280 aa22.96■■□□□ 1.27
SNF8-205ENST00000507302 ZNF526Q8TF50 670 aaPredicted RBP22.96■■□□□ 1.27
SNF8-205ENST00000507302 ASAP1Q9ULH1 1129 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms