RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 FBXW7Q969H0 707 aa9.64□□□□□ -0.87
NEDD4-206ENST00000507063 C14orf93Q9H972 538 aaKnown RBP9.64□□□□□ -0.87
NEDD4-206ENST00000507063 RABGEF1Q9UJ41 708 aa9.64□□□□□ -0.87
NEDD4-206ENST00000507063 ANKRD30BQ9BXX2 1392 aa9.63□□□□□ -0.87
NEDD4-206ENST00000507063 SPATA31A3Q5VYP0 1347 aa9.63□□□□□ -0.87
NEDD4-206ENST00000507063 PRAM1Q96QH2 718 aa9.63□□□□□ -0.87
NEDD4-206ENST00000507063 PMFBP1Q8TBY8 1022 aa9.62□□□□□ -0.87
NEDD4-206ENST00000507063 GJD4Q96KN9 370 aaPredicted RBP9.62□□□□□ -0.87
NEDD4-206ENST00000507063 HIRIP3Q9BW71 556 aaPredicted RBP9.62□□□□□ -0.87
NEDD4-206ENST00000507063 TSHZ2Q9NRE2 1034 aa9.62□□□□□ -0.87
NEDD4-206ENST00000507063 RGPD8O14715 1765 aaPredicted RBP9.62□□□□□ -0.87
NEDD4-206ENST00000507063 FMN2Q9NZ56 1722 aa9.62□□□□□ -0.87
NEDD4-206ENST00000507063 NYAP1Q6ZVC0 841 aa9.61□□□□□ -0.87
NEDD4-206ENST00000507063 ATAD2Q6PL18 1390 aa9.61□□□□□ -0.87
NEDD4-206ENST00000507063 KNDC1Q76NI1 1749 aa9.6□□□□□ -0.87
NEDD4-206ENST00000507063 MARF1Q9Y4F3 1742 aaKnown RBP9.6□□□□□ -0.87
NEDD4-206ENST00000507063 TYW1BQ6NUM6 668 aa9.6□□□□□ -0.87
NEDD4-206ENST00000507063 LMOD2Q6P5Q4 547 aa9.6□□□□□ -0.87
NEDD4-206ENST00000507063 LAPTM4BQ86VI4 370 aa9.6□□□□□ -0.87
NEDD4-206ENST00000507063 UNC5CLQ8IV45 518 aa9.6□□□□□ -0.87
NEDD4-206ENST00000507063 EMILIN3Q9NT22 766 aa9.6□□□□□ -0.87
NEDD4-206ENST00000507063 TRAK1Q9UPV9 953 aa9.6□□□□□ -0.87
NEDD4-206ENST00000507063 KDM2AQ9Y2K7 1162 aa9.6□□□□□ -0.87
NEDD4-206ENST00000507063 RAB3GAP2Q9H2M9 1393 aa9.6□□□□□ -0.87
NEDD4-206ENST00000507063 RALGAPBQ86X10 1494 aa9.59□□□□□ -0.87
NEDD4-206ENST00000507063 NRXN1Q9ULB1 1477 aa9.59□□□□□ -0.87
NEDD4-206ENST00000507063 GLI3P10071 1580 aa9.59□□□□□ -0.87
NEDD4-206ENST00000507063 SIRT1Q96EB6 747 aa9.59□□□□□ -0.87
NEDD4-206ENST00000507063 SLIT2O94813 1529 aa9.59□□□□□ -0.87
NEDD4-206ENST00000507063 DHX57Q6P158 1386 aaKnown RBP9.59□□□□□ -0.87
NEDD4-206ENST00000507063 USP32Q8NFA0 1604 aa9.58□□□□□ -0.88
NEDD4-206ENST00000507063 FAM83GA6ND36 823 aa9.58□□□□□ -0.88
NEDD4-206ENST00000507063 PSME1Q06323 249 aa9.58□□□□□ -0.88
NEDD4-206ENST00000507063 POGKQ9P215 609 aa9.58□□□□□ -0.88
NEDD4-206ENST00000507063 MINK1Q8N4C8 1332 aaPredicted RBP9.57□□□□□ -0.88
NEDD4-206ENST00000507063 PHF14O94880 888 aa9.57□□□□□ -0.88
NEDD4-206ENST00000507063 DEFB132Q7Z7B7 95 aa9.57□□□□□ -0.88
NEDD4-206ENST00000507063 SEPT12Q8IYM1 358 aa9.57□□□□□ -0.88
NEDD4-206ENST00000507063 DCAF11Q8TEB1 546 aa9.57□□□□□ -0.88
NEDD4-206ENST00000507063 PCDHGA10Q9Y5H3 936 aa9.57□□□□□ -0.88
NEDD4-206ENST00000507063 PRR36Q9H6K5 1346 aa9.56□□□□□ -0.88
NEDD4-206ENST00000507063 TNS3Q68CZ2 1445 aa9.56□□□□□ -0.88
NEDD4-206ENST00000507063 KIF1AQ12756 1690 aa9.56□□□□□ -0.88
NEDD4-206ENST00000507063 HAP1P54257 671 aaPredicted RBP9.56□□□□□ -0.88
NEDD4-206ENST00000507063 CCDC9Q9Y3X0 531 aaKnown RBP9.56□□□□□ -0.88
NEDD4-206ENST00000507063 ADGRB1O14514 1584 aa9.55□□□□□ -0.88
NEDD4-206ENST00000507063 BRWD3Q6RI45 1802 aa9.55□□□□□ -0.88
NEDD4-206ENST00000507063 ONECUT3O60422 494 aaPredicted RBP9.55□□□□□ -0.88
NEDD4-206ENST00000507063 ITGBL1O95965 494 aaPredicted RBP9.55□□□□□ -0.88
NEDD4-206ENST00000507063 PLCB2Q00722 1185 aa9.55□□□□□ -0.88
NEDD4-206ENST00000507063 CAMK2BQ13554 666 aa9.55□□□□□ -0.88
NEDD4-206ENST00000507063 FAM182BQ5T319 152 aa9.55□□□□□ -0.88
NEDD4-206ENST00000507063 EPAS1Q99814 870 aa9.55□□□□□ -0.88
NEDD4-206ENST00000507063 VPS72Q15906 364 aa9.54□□□□□ -0.88
NEDD4-206ENST00000507063 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.53□□□□□ -0.88
NEDD4-206ENST00000507063 SBNO1A3KN83 1393 aa9.53□□□□□ -0.88
NEDD4-206ENST00000507063 PLCH1Q4KWH8 1693 aa9.53□□□□□ -0.88
NEDD4-206ENST00000507063 SOWAHBA6NEL2 793 aa9.53□□□□□ -0.88
NEDD4-206ENST00000507063 WASLO00401 505 aaPredicted RBP9.53□□□□□ -0.88
NEDD4-206ENST00000507063 FAM98CQ17RN3 349 aaKnown RBP9.53□□□□□ -0.88
NEDD4-206ENST00000507063 PROX2Q3B8N5 592 aa9.53□□□□□ -0.88
NEDD4-206ENST00000507063 BTG4Q9NY30 223 aa9.53□□□□□ -0.88
NEDD4-206ENST00000507063 ABCA3Q99758 1704 aa9.53□□□□□ -0.88
NEDD4-206ENST00000507063 DLC1Q96QB1 1528 aa9.52□□□□□ -0.88
NEDD4-206ENST00000507063 NUTM2GQ5VZR2 741 aa9.52□□□□□ -0.89
NEDD4-206ENST00000507063 CCDC125Q86Z20 511 aa9.52□□□□□ -0.89
NEDD4-206ENST00000507063 ACIN1Q9UKV3 1341 aaKnown RBP9.52□□□□□ -0.89
NEDD4-206ENST00000507063 TRPM3Q9HCF6 1732 aaPredicted RBP9.51□□□□□ -0.89
NEDD4-206ENST00000507063 COL9A1P20849 921 aa9.51□□□□□ -0.89
NEDD4-206ENST00000507063 KRT27Q7Z3Y8 459 aa9.51□□□□□ -0.89
NEDD4-206ENST00000507063 ZFRQ96KR1 1074 aaKnown RBP9.51□□□□□ -0.89
NEDD4-206ENST00000507063 KIAA1468Q9P260 1216 aa9.51□□□□□ -0.89
NEDD4-206ENST00000507063 ARHGEF10O15013 1369 aa9.5□□□□□ -0.89
NEDD4-206ENST00000507063 BLMP54132 1417 aaPredicted RBP9.5□□□□□ -0.89
NEDD4-206ENST00000507063 ANKARQ7Z5J8 1434 aa9.5□□□□□ -0.89
NEDD4-206ENST00000507063 BCAMP50895 628 aa9.5□□□□□ -0.89
NEDD4-206ENST00000507063 MYT1Q01538 1121 aa9.5□□□□□ -0.89
NEDD4-206ENST00000507063 KCNC4Q03721 635 aa9.5□□□□□ -0.89
NEDD4-206ENST00000507063 CHRNA2Q15822 529 aa9.5□□□□□ -0.89
NEDD4-206ENST00000507063 NGDNQ8NEJ9 315 aaKnown RBP9.5□□□□□ -0.89
NEDD4-206ENST00000507063 NUDT16Q96DE0 195 aaKnown RBP9.5□□□□□ -0.89
NEDD4-206ENST00000507063 ADGRB2O60241 1585 aa9.5□□□□□ -0.89
NEDD4-206ENST00000507063 ALS2Q96Q42 1657 aa9.49□□□□□ -0.89
NEDD4-206ENST00000507063 NBPF1Q3BBV0 1214 aa9.49□□□□□ -0.89
NEDD4-206ENST00000507063 GPRASP1Q5JY77 1395 aa9.49□□□□□ -0.89
NEDD4-206ENST00000507063 NRAPQ86VF7 1730 aa9.48□□□□□ -0.89
NEDD4-206ENST00000507063 NWD2Q9ULI1 1742 aa9.48□□□□□ -0.89
NEDD4-206ENST00000507063 TULP4Q9NRJ4 1543 aa9.48□□□□□ -0.89
NEDD4-206ENST00000507063 ZC3H6P61129 1189 aaKnown RBP9.48□□□□□ -0.89
NEDD4-206ENST00000507063 C6orf132Q5T0Z8 1188 aa9.48□□□□□ -0.89
NEDD4-206ENST00000507063 CDK19Q9BWU1 502 aa9.48□□□□□ -0.89
NEDD4-206ENST00000507063 DPYSL4O14531 572 aa9.47□□□□□ -0.89
NEDD4-206ENST00000507063 EN1Q05925 392 aaPredicted RBP9.47□□□□□ -0.89
NEDD4-206ENST00000507063 SPATA31A5Q5VU36 1347 aa9.47□□□□□ -0.89
NEDD4-206ENST00000507063 SPATA31A7Q8IWB4 1347 aa9.47□□□□□ -0.89
NEDD4-206ENST00000507063 KIAA0232Q92628 1395 aa9.47□□□□□ -0.89
NEDD4-206ENST00000507063 ATP7BP35670 1465 aa9.47□□□□□ -0.89
NEDD4-206ENST00000507063 ARHGEF28Q8N1W1 1705 aaKnown RBP9.46□□□□□ -0.89
NEDD4-206ENST00000507063 CRYBG1Q9Y4K1 1723 aa9.46□□□□□ -0.89
NEDD4-206ENST00000507063 SF3B2Q13435 895 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms