RNA–Protein interactions for RNA: ENST00000507054.1

RGMB-205, Transcript of repulsive guidance molecule BMP co-receptor b, human

TSL 5

Gene RGMB, Length 300 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RGMB-205	ENST00000507054	FAM196A	Q6ZSG2	479 aa		27.94	■■■□□ 2.06
RGMB-205	ENST00000507054	MEGF6	O75095	1541 aa		27.93	■■■□□ 2.06
RGMB-205	ENST00000507054	MARCH10	Q8NA82	808 aa	Predicted RBP	27.93	■■■□□ 2.06
RGMB-205	ENST00000507054	COL3A1	P02461	1466 aa	Predicted RBP	27.93	■■■□□ 2.06
RGMB-205	ENST00000507054	SBF2	Q86WG5	1849 aa		27.91	■■■□□ 2.06
RGMB-205	ENST00000507054	IL13	P35225	146 aa		27.91	■■■□□ 2.06
RGMB-205	ENST00000507054	OVOS2	A0A0G2JMS6	1433 aa		27.91	■■■□□ 2.06
RGMB-205	ENST00000507054	RAPGEF4	Q8WZA2	1011 aa		27.9	■■■□□ 2.06
RGMB-205	ENST00000507054	SHANK3	Q9BYB0	1731 aa		27.89	■■■□□ 2.06
RGMB-205	ENST00000507054	RREB1	Q92766	1687 aa		27.88	■■■□□ 2.05
RGMB-205	ENST00000507054	TAT	P17735	454 aa	Predicted RBP	27.88	■■■□□ 2.05
RGMB-205	ENST00000507054	IGSF1	Q8N6C5	1336 aa		27.88	■■■□□ 2.05
RGMB-205	ENST00000507054	APBA3	O96018	575 aa		27.87	■■■□□ 2.05
RGMB-205	ENST00000507054	PRKRIP1	Q9H875	184 aa	Predicted RBP	27.87	■■■□□ 2.05
RGMB-205	ENST00000507054	DIAPH1	O60610	1272 aa	Known RBP	27.86	■■■□□ 2.05
RGMB-205	ENST00000507054	ZCRB1	Q8TBF4	217 aa	Known RBP	27.86	■■■□□ 2.05
RGMB-205	ENST00000507054	KAT6B	Q8WYB5	2073 aa		27.86	■■■□□ 2.05
RGMB-205	ENST00000507054	NUP188	Q5SRE5	1749 aa		27.85	■■■□□ 2.05
RGMB-205	ENST00000507054	CFAP53	Q96M91	514 aa		27.85	■■■□□ 2.05
RGMB-205	ENST00000507054	MYBBP1A	Q9BQG0	1328 aa	Known RBP	27.84	■■■□□ 2.05
RGMB-205	ENST00000507054	BCL9	O00512	1426 aa		27.84	■■■□□ 2.05
RGMB-205	ENST00000507054	DDX54	Q8TDD1	881 aa	Known RBP	27.83	■■■□□ 2.05
RGMB-205	ENST00000507054	PKD1L3	Q7Z443	1732 aa		27.83	■■■□□ 2.05
RGMB-205	ENST00000507054	AEBP1	Q8IUX7	1158 aa		27.8	■■■□□ 2.04
RGMB-205	ENST00000507054	KDR	P35968	1356 aa		27.78	■■■□□ 2.04
RGMB-205	ENST00000507054	SULT6B1	Q6IMI4	303 aa		27.78	■■■□□ 2.04
RGMB-205	ENST00000507054	U2SURP	O15042	1029 aa	Known RBP	27.75	■■■□□ 2.03
RGMB-205	ENST00000507054	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	27.75	■■■□□ 2.03
RGMB-205	ENST00000507054	NHS	Q6T4R5	1651 aa		27.75	■■■□□ 2.03
RGMB-205	ENST00000507054	PCDH11X	Q9BZA7	1347 aa		27.74	■■■□□ 2.03
RGMB-205	ENST00000507054	PCDH11Y	Q9BZA8	1340 aa		27.74	■■■□□ 2.03
RGMB-205	ENST00000507054	HMOX1	P09601	288 aa		27.74	■■■□□ 2.03
RGMB-205	ENST00000507054	PTF1A	Q7RTS3	328 aa		27.74	■■■□□ 2.03
RGMB-205	ENST00000507054	SPG7	Q9UQ90	795 aa		27.74	■■■□□ 2.03
RGMB-205	ENST00000507054	CYP27B1	O15528	508 aa		27.73	■■■□□ 2.03
RGMB-205	ENST00000507054	ACSBG1	Q96GR2	724 aa		27.73	■■■□□ 2.03
RGMB-205	ENST00000507054	BCL11B	Q9C0K0	894 aa	Predicted RBP	27.73	■■■□□ 2.03
RGMB-205	ENST00000507054	PLEKHG2	Q9H7P9	1386 aa		27.73	■■■□□ 2.03
RGMB-205	ENST00000507054	ANP32C	O43423	234 aa		27.72	■■■□□ 2.03
RGMB-205	ENST00000507054	NUDC	Q9Y266	331 aa		27.72	■■■□□ 2.03
RGMB-205	ENST00000507054	DOT1L	Q8TEK3	1739 aa		27.72	■■■□□ 2.03
RGMB-205	ENST00000507054	KCNQ2	O43526	872 aa		27.71	■■■□□ 2.03
RGMB-205	ENST00000507054	PLEKHO1	Q53GL0	409 aa	Predicted RBP	27.68	■■■□□ 2.02
RGMB-205	ENST00000507054	BTAF1	O14981	1849 aa		27.68	■■■□□ 2.02
RGMB-205	ENST00000507054	U2AF1L5	P0DN76	240 aa	Predicted RBP	27.66	■■■□□ 2.02
RGMB-205	ENST00000507054	U2AF1	Q01081	240 aa	Known RBP eCLIP	27.66	■■■□□ 2.02
RGMB-205	ENST00000507054	AMOT	Q4VCS5	1084 aa		27.65	■■■□□ 2.02
RGMB-205	ENST00000507054	NBPF14	Q5TI25	921 aa		27.65	■■■□□ 2.02
RGMB-205	ENST00000507054	TOGARAM1	Q9Y4F4	1720 aa		27.64	■■■□□ 2.02
RGMB-205	ENST00000507054	PHKG2	P15735	406 aa		27.64	■■■□□ 2.02
RGMB-205	ENST00000507054	PRIM1	P49642	420 aa	Known RBP	27.64	■■■□□ 2.02
RGMB-205	ENST00000507054	NKX1-1	Q15270	411 aa	Predicted RBP	27.64	■■■□□ 2.02
RGMB-205	ENST00000507054	IFNL2	Q8IZJ0	200 aa		27.64	■■■□□ 2.02
RGMB-205	ENST00000507054	RSPH6A	Q9H0K4	717 aa		27.64	■■■□□ 2.02
RGMB-205	ENST00000507054	ITGB4	P16144	1822 aa		27.64	■■■□□ 2.01
RGMB-205	ENST00000507054	RGPD3	A6NKT7	1758 aa	Predicted RBP	27.63	■■■□□ 2.01
RGMB-205	ENST00000507054	RGPD4	Q7Z3J3	1758 aa		27.63	■■■□□ 2.01
RGMB-205	ENST00000507054	ANO8	Q9HCE9	1232 aa	Predicted RBP	27.63	■■■□□ 2.01
RGMB-205	ENST00000507054	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.62	■■■□□ 2.01
RGMB-205	ENST00000507054	PLSCR1	O15162	318 aa		27.61	■■■□□ 2.01
RGMB-205	ENST00000507054	SYTL4	Q96C24	671 aa	Predicted RBP	27.61	■■■□□ 2.01
RGMB-205	ENST00000507054	PRKAR2B	P31323	418 aa		27.6	■■■□□ 2.01
RGMB-205	ENST00000507054	CCDC184	Q52MB2	194 aa		27.6	■■■□□ 2.01
RGMB-205	ENST00000507054	FCHSD2	O94868	740 aa		27.59	■■■□□ 2.01
RGMB-205	ENST00000507054	PROM2	Q8N271	834 aa		27.58	■■■□□ 2.01
RGMB-205	ENST00000507054	PDGFD	Q9GZP0	370 aa	Predicted RBP	27.58	■■■□□ 2.01
RGMB-205	ENST00000507054	SPON1	Q9HCB6	807 aa		27.58	■■■□□ 2.01
RGMB-205	ENST00000507054	CASZ1	Q86V15	1759 aa		27.57	■■■□□ 2
RGMB-205	ENST00000507054	MTHFSD	Q2M296	383 aa	Known RBP	27.56	■■■□□ 2
RGMB-205	ENST00000507054	C1orf141	Q5JVX7	400 aa		27.56	■■■□□ 2
RGMB-205	ENST00000507054	VIRMA	Q69YN4	1812 aa	Known RBP	27.55	■■■□□ 2
RGMB-205	ENST00000507054	PHACTR3	Q96KR7	559 aa		27.55	■■■□□ 2
RGMB-205	ENST00000507054	HSP90AB1	P08238	724 aa	Known RBP	27.54	■■■□□ 2
RGMB-205	ENST00000507054	SCN11A	Q9UI33	1791 aa		27.53	■■■□□ 2
RGMB-205	ENST00000507054	DCAF5	Q96JK2	942 aa		27.53	■■■□□ 2
RGMB-205	ENST00000507054	KDM6A	O15550	1401 aa	Predicted RBP	27.52	■■■□□ 2
RGMB-205	ENST00000507054	WDR43	Q15061	677 aa	Known RBP eCLIP	27.52	■■■□□ 2
RGMB-205	ENST00000507054	AKAP4	Q5JQC9	854 aa		27.52	■■■□□ 2
RGMB-205	ENST00000507054	DIEXF	Q68CQ4	756 aa	Known RBP	27.52	■■■□□ 2
RGMB-205	ENST00000507054	MPRIP	Q6WCQ1	1025 aa		27.52	■■■□□ 2
RGMB-205	ENST00000507054	YY1	P25490	414 aa		27.51	■■□□□ 1.99
RGMB-205	ENST00000507054	PLEKHF1	Q96S99	279 aa		27.51	■■□□□ 1.99
RGMB-205	ENST00000507054	TXNRD1	Q16881	649 aa		27.5	■■□□□ 1.99
RGMB-205	ENST00000507054	MRS2	Q9HD23	443 aa		27.5	■■□□□ 1.99
RGMB-205	ENST00000507054	LY75	O60449	1722 aa		27.5	■■□□□ 1.99
RGMB-205	ENST00000507054	GAS2L2	Q8NHY3	880 aa		27.49	■■□□□ 1.99
RGMB-205	ENST00000507054	PIGB	Q92521	554 aa		27.49	■■□□□ 1.99
RGMB-205	ENST00000507054	PPP1R1B	Q9UD71	204 aa	Predicted RBP	27.49	■■□□□ 1.99
RGMB-205	ENST00000507054	ERVV-2	B6SEH9	535 aa		27.48	■■□□□ 1.99
RGMB-205	ENST00000507054	TMOD3	Q9NYL9	352 aa		27.48	■■□□□ 1.99
RGMB-205	ENST00000507054	ADAMTS8	Q9UP79	889 aa		27.48	■■□□□ 1.99
RGMB-205	ENST00000507054	PNN	Q9H307	717 aa	Known RBP	27.47	■■□□□ 1.99
RGMB-205	ENST00000507054	ADAMTS7	Q9UKP4	1686 aa		27.46	■■□□□ 1.99
RGMB-205	ENST00000507054	PTGER2	P43116	358 aa		27.44	■■□□□ 1.98
RGMB-205	ENST00000507054	PNISR	Q8TF01	805 aa	Known RBP	27.44	■■□□□ 1.98
RGMB-205	ENST00000507054	LGR6	Q9HBX8	967 aa		27.44	■■□□□ 1.98
RGMB-205	ENST00000507054	MAP3K5	Q99683	1374 aa		27.44	■■□□□ 1.98
RGMB-205	ENST00000507054	ZBTB7A	O95365	584 aa		27.43	■■□□□ 1.98
RGMB-205	ENST00000507054	NEFM	P07197	916 aa		27.43	■■□□□ 1.98
RGMB-205	ENST00000507054	CABP4	P57796	275 aa		27.43	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms