RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 SLC27A3Q5K4L6 730 aa8.54□□□□□ -1.04
CALCOCO2-208ENST00000506971 RNF135Q8IUD6 432 aa8.54□□□□□ -1.04
CALCOCO2-208ENST00000506971 RAB6BQ9NRW1 208 aa8.54□□□□□ -1.04
CALCOCO2-208ENST00000506971 ERBB4Q15303 1308 aa8.54□□□□□ -1.04
CALCOCO2-208ENST00000506971 A0A1W2PRU2 124 aa8.53□□□□□ -1.04
CALCOCO2-208ENST00000506971 CDC14CA4D256 554 aa8.53□□□□□ -1.04
CALCOCO2-208ENST00000506971 WASHC4Q2M389 1173 aa8.53□□□□□ -1.04
CALCOCO2-208ENST00000506971 CYP2U1Q7Z449 544 aa8.53□□□□□ -1.04
CALCOCO2-208ENST00000506971 NPAS3Q8IXF0 933 aa8.53□□□□□ -1.04
CALCOCO2-208ENST00000506971 CDCA7Q9BWT1 371 aaPredicted RBP8.53□□□□□ -1.04
CALCOCO2-208ENST00000506971 DOLKQ9UPQ8 538 aa8.53□□□□□ -1.04
CALCOCO2-208ENST00000506971 ERVK-9P63128 1117 aa8.52□□□□□ -1.05
CALCOCO2-208ENST00000506971 INSM1Q01101 510 aaPredicted RBP8.52□□□□□ -1.05
CALCOCO2-208ENST00000506971 LCE2AQ5TA79 106 aaPredicted RBP8.52□□□□□ -1.05
CALCOCO2-208ENST00000506971 LYSMD3Q7Z3D4 306 aa8.52□□□□□ -1.05
CALCOCO2-208ENST00000506971 CCDC125Q86Z20 511 aa8.52□□□□□ -1.05
CALCOCO2-208ENST00000506971 RNF217Q8TC41 542 aa8.52□□□□□ -1.05
CALCOCO2-208ENST00000506971 CCDC85AQ96PX6 553 aaPredicted RBP8.52□□□□□ -1.05
CALCOCO2-208ENST00000506971 ARHGEF10LQ9HCE6 1279 aa8.52□□□□□ -1.05
CALCOCO2-208ENST00000506971 TSGA10IPQ3SY00 556 aa8.51□□□□□ -1.05
CALCOCO2-208ENST00000506971 LCE2CQ5TA81 110 aa8.51□□□□□ -1.05
CALCOCO2-208ENST00000506971 CCDC155Q8N6L0 562 aa8.51□□□□□ -1.05
CALCOCO2-208ENST00000506971 POM121Q96HA1 1249 aa8.51□□□□□ -1.05
CALCOCO2-208ENST00000506971 COG6Q9Y2V7 657 aa8.51□□□□□ -1.05
CALCOCO2-208ENST00000506971 FOXD4L5Q5VV16 416 aaPredicted RBP8.5□□□□□ -1.05
CALCOCO2-208ENST00000506971 KDF1Q8NAX2 398 aaPredicted RBP8.5□□□□□ -1.05
CALCOCO2-208ENST00000506971 FLIIQ13045 1269 aa8.49□□□□□ -1.05
CALCOCO2-208ENST00000506971 TMEM132AQ24JP5 1023 aa8.49□□□□□ -1.05
CALCOCO2-208ENST00000506971 GTF2E1P29083 439 aaPredicted RBP8.48□□□□□ -1.05
CALCOCO2-208ENST00000506971 RIPOR1Q6ZS17 1223 aa8.48□□□□□ -1.05
CALCOCO2-208ENST00000506971 GAS2L1Q99501 681 aaPredicted RBP8.48□□□□□ -1.05
CALCOCO2-208ENST00000506971 OSBPL3Q9H4L5 887 aa8.48□□□□□ -1.05
CALCOCO2-208ENST00000506971 POU4F2Q12837 409 aa8.47□□□□□ -1.05
CALCOCO2-208ENST00000506971 USP4Q13107 963 aa8.47□□□□□ -1.05
CALCOCO2-208ENST00000506971 VWA5B2Q8N398 1253 aa8.47□□□□□ -1.05
CALCOCO2-208ENST00000506971 WIPF1O43516 503 aa8.46□□□□□ -1.06
CALCOCO2-208ENST00000506971 SLC35F4A4IF30 521 aa8.45□□□□□ -1.06
CALCOCO2-208ENST00000506971 STAU1O95793 577 aaKnown RBP8.45□□□□□ -1.06
CALCOCO2-208ENST00000506971 ITGA6P23229 1130 aa8.45□□□□□ -1.06
CALCOCO2-208ENST00000506971 PHKA2P46019 1235 aa8.45□□□□□ -1.06
CALCOCO2-208ENST00000506971 RNF144AP50876 292 aaPredicted RBP8.45□□□□□ -1.06
CALCOCO2-208ENST00000506971 CNKSR1Q969H4 720 aa8.45□□□□□ -1.06
CALCOCO2-208ENST00000506971 SKIP12755 728 aa8.44□□□□□ -1.06
CALCOCO2-208ENST00000506971 CLN3Q13286 438 aa8.44□□□□□ -1.06
CALCOCO2-208ENST00000506971 TMEM214Q6NUQ4 689 aaKnown RBP8.44□□□□□ -1.06
CALCOCO2-208ENST00000506971 SV2AQ7L0J3 742 aa8.44□□□□□ -1.06
CALCOCO2-208ENST00000506971 SIRT1Q96EB6 747 aa8.44□□□□□ -1.06
CALCOCO2-208ENST00000506971 CNTNAP3BQ96NU0 1288 aa8.44□□□□□ -1.06
CALCOCO2-208ENST00000506971 CNTNAP3Q9BZ76 1288 aa8.44□□□□□ -1.06
CALCOCO2-208ENST00000506971 TRAK2O60296 914 aa8.43□□□□□ -1.06
CALCOCO2-208ENST00000506971 GNRH1P01148 92 aa8.43□□□□□ -1.06
CALCOCO2-208ENST00000506971 SOX11P35716 441 aa8.43□□□□□ -1.06
CALCOCO2-208ENST00000506971 ZSCAN1Q8NBB4 408 aa8.43□□□□□ -1.06
CALCOCO2-208ENST00000506971 PLPP7Q8NBV4 271 aa8.43□□□□□ -1.06
CALCOCO2-208ENST00000506971 PIK3CDO00329 1044 aa8.42□□□□□ -1.06
CALCOCO2-208ENST00000506971 CENPCQ03188 943 aa8.42□□□□□ -1.06
CALCOCO2-208ENST00000506971 ESCO1Q5FWF5 840 aa8.42□□□□□ -1.06
CALCOCO2-208ENST00000506971 PHTF2Q8N3S3 785 aa8.42□□□□□ -1.06
CALCOCO2-208ENST00000506971 GPR161Q8N6U8 529 aaKnown RBP8.42□□□□□ -1.06
CALCOCO2-208ENST00000506971 CLUAP1Q96AJ1 413 aa8.42□□□□□ -1.06
CALCOCO2-208ENST00000506971 ZSCAN10Q96SZ4 725 aaPredicted RBP8.42□□□□□ -1.06
CALCOCO2-208ENST00000506971 FAM181BA6NEQ2 426 aa8.41□□□□□ -1.06
CALCOCO2-208ENST00000506971 GPC1P35052 558 aa8.41□□□□□ -1.06
CALCOCO2-208ENST00000506971 PSME1Q06323 249 aa8.41□□□□□ -1.06
CALCOCO2-208ENST00000506971 ESYT1Q9BSJ8 1104 aa8.41□□□□□ -1.06
CALCOCO2-208ENST00000506971 COL25A1Q9BXS0 654 aaPredicted RBP8.41□□□□□ -1.06
CALCOCO2-208ENST00000506971 TIMMDC1Q9NPL8 285 aa8.41□□□□□ -1.06
CALCOCO2-208ENST00000506971 SENP3-EIF4A1A0A087X0R7 540 aa8.4□□□□□ -1.06
CALCOCO2-208ENST00000506971 POM121CA8CG34 1229 aa8.4□□□□□ -1.06
CALCOCO2-208ENST00000506971 IL2RAP01589 272 aa8.4□□□□□ -1.06
CALCOCO2-208ENST00000506971 GNASQ5JWF2 1037 aa8.4□□□□□ -1.06
CALCOCO2-208ENST00000506971 NBPF10Q6P3W6 841 aaKnown RBP8.4□□□□□ -1.06
CALCOCO2-208ENST00000506971 TAS1R3Q7RTX0 852 aa8.4□□□□□ -1.06
CALCOCO2-208ENST00000506971 DEPDC4Q8N2C3 294 aa8.4□□□□□ -1.06
CALCOCO2-208ENST00000506971 NBPF15Q8N660 670 aa8.4□□□□□ -1.06
CALCOCO2-208ENST00000506971 GPAMQ9HCL2 828 aa8.4□□□□□ -1.06
CALCOCO2-208ENST00000506971 STK17AQ9UEE5 414 aa8.4□□□□□ -1.06
CALCOCO2-208ENST00000506971 SERTAD1Q9UHV2 236 aa8.4□□□□□ -1.06
CALCOCO2-208ENST00000506971 WASLO00401 505 aaPredicted RBP8.39□□□□□ -1.07
CALCOCO2-208ENST00000506971 TLR1Q15399 786 aa8.39□□□□□ -1.07
CALCOCO2-208ENST00000506971 EML3Q32P44 896 aa8.39□□□□□ -1.07
CALCOCO2-208ENST00000506971 MAP7D1Q3KQU3 841 aa8.39□□□□□ -1.07
CALCOCO2-208ENST00000506971 GRIP2Q9C0E4 1043 aa8.39□□□□□ -1.07
CALCOCO2-208ENST00000506971 GPR25O00155 361 aa8.38□□□□□ -1.07
CALCOCO2-208ENST00000506971 VSIG8P0DPA2 414 aa8.38□□□□□ -1.07
CALCOCO2-208ENST00000506971 HDGFL1Q5TGJ6 251 aa8.38□□□□□ -1.07
CALCOCO2-208ENST00000506971 FOXR1Q6PIV2 292 aa8.38□□□□□ -1.07
CALCOCO2-208ENST00000506971 ETNK1Q9HBU6 452 aa8.38□□□□□ -1.07
CALCOCO2-208ENST00000506971 CUEDC1Q9NWM3 386 aaPredicted RBP8.38□□□□□ -1.07
CALCOCO2-208ENST00000506971 GDF10P55107 478 aa8.37□□□□□ -1.07
CALCOCO2-208ENST00000506971 GTPBP3Q969Y2 492 aaKnown RBP8.36□□□□□ -1.07
CALCOCO2-208ENST00000506971 AIDAQ96BJ3 306 aa8.36□□□□□ -1.07
CALCOCO2-208ENST00000506971 XAGE2Q96GT9 111 aa8.36□□□□□ -1.07
CALCOCO2-208ENST00000506971 ALG2Q9H553 416 aa8.36□□□□□ -1.07
CALCOCO2-208ENST00000506971 NOD1Q9Y239 953 aa8.36□□□□□ -1.07
CALCOCO2-208ENST00000506971 DYRK1BQ9Y463 629 aa8.36□□□□□ -1.07
CALCOCO2-208ENST00000506971 H7C1W4 665 aa8.35□□□□□ -1.07
CALCOCO2-208ENST00000506971 NCOA4Q13772 614 aa8.35□□□□□ -1.07
CALCOCO2-208ENST00000506971 RNFT1Q5M7Z0 435 aa8.35□□□□□ -1.07
CALCOCO2-208ENST00000506971 CSB-PGBD3P0DP91 1061 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms