RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 ITGB4P16144 1822 aa18.93■□□□□ 0.62
DDX41-206ENST00000506965 RRS1Q15050 365 aaKnown RBP18.93■□□□□ 0.62
DDX41-206ENST00000506965 PNPLA7Q6ZV29 1317 aa18.93■□□□□ 0.62
DDX41-206ENST00000506965 FYB1O15117 783 aa18.91■□□□□ 0.62
DDX41-206ENST00000506965 PRIM1P49642 420 aaKnown RBP18.91■□□□□ 0.62
DDX41-206ENST00000506965 NBPF6Q5VWK0 638 aa18.91■□□□□ 0.62
DDX41-206ENST00000506965 USHBP1Q8N6Y0 703 aa18.91■□□□□ 0.62
DDX41-206ENST00000506965 NBPF4Q96M43 638 aa18.91■□□□□ 0.62
DDX41-206ENST00000506965 C5P01031 1676 aa18.91■□□□□ 0.62
DDX41-206ENST00000506965 MAP3K5Q99683 1374 aa18.91■□□□□ 0.62
DDX41-206ENST00000506965 ANKRD26Q9UPS8 1709 aa18.91■□□□□ 0.62
DDX41-206ENST00000506965 COG3Q96JB2 828 aa18.9■□□□□ 0.62
DDX41-206ENST00000506965 GGNBP2Q9H3C7 697 aa18.9■□□□□ 0.62
DDX41-206ENST00000506965 PKD1L3Q7Z443 1732 aa18.89■□□□□ 0.61
DDX41-206ENST00000506965 ARXQ96QS3 562 aa18.89■□□□□ 0.61
DDX41-206ENST00000506965 USP47Q96K76 1375 aa18.89■□□□□ 0.61
DDX41-206ENST00000506965 ZNF784Q8NCA9 323 aaPredicted RBP18.88■□□□□ 0.61
DDX41-206ENST00000506965 RTL1A6NKG5 1358 aa18.88■□□□□ 0.61
DDX41-206ENST00000506965 MAP2P11137 1827 aaKnown RBP18.86■□□□□ 0.61
DDX41-206ENST00000506965 AMPHP49418 695 aa18.86■□□□□ 0.61
DDX41-206ENST00000506965 ZCRB1Q8TBF4 217 aaKnown RBP18.86■□□□□ 0.61
DDX41-206ENST00000506965 HSP90AB2PQ58FF8 381 aa18.85■□□□□ 0.61
DDX41-206ENST00000506965 SLC27A3Q5K4L6 730 aa18.85■□□□□ 0.61
DDX41-206ENST00000506965 SYTL4Q96C24 671 aaPredicted RBP18.85■□□□□ 0.61
DDX41-206ENST00000506965 CARD14Q9BXL6 1004 aa18.85■□□□□ 0.61
DDX41-206ENST00000506965 UBR3Q6ZT12 1888 aa18.84■□□□□ 0.61
DDX41-206ENST00000506965 NLGN2Q8NFZ4 835 aa18.83■□□□□ 0.6
DDX41-206ENST00000506965 NCAPD2Q15021 1401 aa18.83■□□□□ 0.6
DDX41-206ENST00000506965 INSRP06213 1382 aa18.82■□□□□ 0.6
DDX41-206ENST00000506965 AMIGO3Q86WK7 504 aa18.82■□□□□ 0.6
DDX41-206ENST00000506965 DCAF8L1A6NGE4 600 aa18.81■□□□□ 0.6
DDX41-206ENST00000506965 CYP27B1O15528 508 aa18.8■□□□□ 0.6
DDX41-206ENST00000506965 COL23A1Q86Y22 540 aaPredicted RBP18.8■□□□□ 0.6
DDX41-206ENST00000506965 EMILIN1Q9Y6C2 1016 aa18.8■□□□□ 0.6
DDX41-206ENST00000506965 C4BP0C0L5 1744 aa18.8■□□□□ 0.6
DDX41-206ENST00000506965 SLC16A10Q8TF71 515 aa18.79■□□□□ 0.6
DDX41-206ENST00000506965 TFCP2L1Q9NZI6 479 aa18.79■□□□□ 0.6
DDX41-206ENST00000506965 CCNL1Q9UK58 526 aaPredicted RBP18.79■□□□□ 0.6
DDX41-206ENST00000506965 NSD3Q9BZ95 1437 aa18.79■□□□□ 0.6
DDX41-206ENST00000506965 TMF1P82094 1093 aa18.78■□□□□ 0.6
DDX41-206ENST00000506965 FLT4P35916 1363 aa18.78■□□□□ 0.6
DDX41-206ENST00000506965 SMIM5Q71RC9 77 aa18.77■□□□□ 0.6
DDX41-206ENST00000506965 YBX3P16989 372 aaKnown RBP eCLIP18.75■□□□□ 0.599e-6■□□□□ 10.4
DDX41-206ENST00000506965 MSL1Q68DK7 614 aa18.75■□□□□ 0.59
DDX41-206ENST00000506965 KLHL34Q8N239 644 aa18.75■□□□□ 0.59
DDX41-206ENST00000506965 CGNL1Q0VF96 1302 aa18.74■□□□□ 0.59
DDX41-206ENST00000506965 KIF24Q5T7B8 1368 aa18.74■□□□□ 0.59
DDX41-206ENST00000506965 PALLDQ8WX93 1383 aa18.74■□□□□ 0.59
DDX41-206ENST00000506965 SMG6Q86US8 1419 aaKnown RBP18.74■□□□□ 0.59
DDX41-206ENST00000506965 TATP17735 454 aaPredicted RBP18.73■□□□□ 0.59
DDX41-206ENST00000506965 RAPGEF4Q8WZA2 1011 aa18.73■□□□□ 0.59
DDX41-206ENST00000506965 PCDH11XQ9BZA7 1347 aa18.73■□□□□ 0.59
DDX41-206ENST00000506965 PCDH11YQ9BZA8 1340 aa18.73■□□□□ 0.59
DDX41-206ENST00000506965 SLC24A1O60721 1099 aa18.71■□□□□ 0.59
DDX41-206ENST00000506965 POLD1P28340 1107 aa18.71■□□□□ 0.59
DDX41-206ENST00000506965 GPR162Q16538 588 aa18.71■□□□□ 0.59
DDX41-206ENST00000506965 KIAA1551Q9HCM1 1747 aa18.71■□□□□ 0.59
DDX41-206ENST00000506965 MPRIPQ6WCQ1 1025 aa18.7■□□□□ 0.58
DDX41-206ENST00000506965 PIGBQ92521 554 aa18.69■□□□□ 0.58
DDX41-206ENST00000506965 TRIM26Q12899 539 aaPredicted RBP18.68■□□□□ 0.58
DDX41-206ENST00000506965 NKX1-1Q15270 411 aaPredicted RBP18.68■□□□□ 0.58
DDX41-206ENST00000506965 EYA1Q99502 592 aa18.68■□□□□ 0.58
DDX41-206ENST00000506965 COL5A3P25940 1745 aaPredicted RBP18.67■□□□□ 0.58
DDX41-206ENST00000506965 CEP350Q5VT06 3117 aa18.67■□□□□ 0.58
DDX41-206ENST00000506965 PELP1Q8IZL8 1130 aaKnown RBP18.67■□□□□ 0.58
DDX41-206ENST00000506965 WASHC2AQ641Q2 1341 aa18.67■□□□□ 0.58
DDX41-206ENST00000506965 C1QTNF8P60827 252 aa18.66■□□□□ 0.58
DDX41-206ENST00000506965 LINC00116Q8NCU8 138 aa18.66■□□□□ 0.58
DDX41-206ENST00000506965 POLKQ9UBT6 870 aa18.66■□□□□ 0.58
DDX41-206ENST00000506965 MYH14Q7Z406 1995 aaKnown RBP18.66■□□□□ 0.58
DDX41-206ENST00000506965 MSH5O43196 834 aa18.65■□□□□ 0.58
DDX41-206ENST00000506965 ITPK1Q13572 414 aa18.65■□□□□ 0.58
DDX41-206ENST00000506965 KIF13BQ9NQT8 1826 aa18.65■□□□□ 0.58
DDX41-206ENST00000506965 PPM1GO15355 546 aaPredicted RBP18.64■□□□□ 0.57
DDX41-206ENST00000506965 ASAP1Q9ULH1 1129 aa18.63■□□□□ 0.57
DDX41-206ENST00000506965 EIF4A2Q14240 407 aaKnown RBP18.62■□□□□ 0.57
DDX41-206ENST00000506965 CDCA8Q53HL2 280 aa18.62■□□□□ 0.57
DDX41-206ENST00000506965 ZNF831Q5JPB2 1677 aa18.62■□□□□ 0.57
DDX41-206ENST00000506965 C4AP0C0L4 1744 aa18.62■□□□□ 0.57
DDX41-206ENST00000506965 N4BP2Q86UW6 1770 aaPredicted RBP18.62■□□□□ 0.57
DDX41-206ENST00000506965 KDRP35968 1356 aa18.61■□□□□ 0.57
DDX41-206ENST00000506965 SLC4A9Q96Q91 983 aa18.61■□□□□ 0.57
DDX41-206ENST00000506965 ADCY9O60503 1353 aa18.6■□□□□ 0.57
DDX41-206ENST00000506965 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.6■□□□□ 0.57
DDX41-206ENST00000506965 LOC102724428A0A0B4J2F2 783 aa18.6■□□□□ 0.57
DDX41-206ENST00000506965 PHF14O94880 888 aa18.6■□□□□ 0.57
DDX41-206ENST00000506965 PHKG2P15735 406 aa18.6■□□□□ 0.57
DDX41-206ENST00000506965 SIK1P57059 783 aa18.6■□□□□ 0.57
DDX41-206ENST00000506965 BRCA1P38398 1863 aaKnown RBP18.6■□□□□ 0.57
DDX41-206ENST00000506965 VIRMAQ69YN4 1812 aaKnown RBP18.6■□□□□ 0.57
DDX41-206ENST00000506965 KDM6AO15550 1401 aaPredicted RBP18.59■□□□□ 0.57
DDX41-206ENST00000506965 SENP3-EIF4A1A0A087X0R7 540 aa18.59■□□□□ 0.57
DDX41-206ENST00000506965 TNNT2P45379 298 aaPredicted RBP18.58■□□□□ 0.56
DDX41-206ENST00000506965 SMARCC1Q92922 1105 aaPredicted RBP18.58■□□□□ 0.56
DDX41-206ENST00000506965 ATG3Q9NT62 314 aa18.58■□□□□ 0.56
DDX41-206ENST00000506965 WWC3Q9ULE0 1092 aa18.58■□□□□ 0.56
DDX41-206ENST00000506965 CD2APQ9Y5K6 639 aa18.58■□□□□ 0.56
DDX41-206ENST00000506965 ATP10DQ9P241 1426 aa18.57■□□□□ 0.56
DDX41-206ENST00000506965 IGSF1Q8N6C5 1336 aa18.57■□□□□ 0.56
DDX41-206ENST00000506965 AK7Q96M32 723 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms