RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 NUDCQ9Y266 331 aa13.06□□□□□ -0.32
SFXN1-205ENST00000506963 ANP32CO43423 234 aa13.05□□□□□ -0.32
SFXN1-205ENST00000506963 SULT6B1Q6IMI4 303 aa13.05□□□□□ -0.32
SFXN1-205ENST00000506963 ZCRB1Q8TBF4 217 aaKnown RBP13.05□□□□□ -0.32
SFXN1-205ENST00000506963 AEBP1Q8IUX7 1158 aa13.04□□□□□ -0.32
SFXN1-205ENST00000506963 MARCH10Q8NA82 808 aaPredicted RBP13.04□□□□□ -0.32
SFXN1-205ENST00000506963 FAM196AQ6ZSG2 479 aa13.03□□□□□ -0.32
SFXN1-205ENST00000506963 FCHSD2O94868 740 aa13.02□□□□□ -0.33
SFXN1-205ENST00000506963 AMOTQ4VCS5 1084 aa13.02□□□□□ -0.33
SFXN1-205ENST00000506963 SPG7Q9UQ90 795 aa13.02□□□□□ -0.33
SFXN1-205ENST00000506963 PCDH11XQ9BZA7 1347 aa13.02□□□□□ -0.33
SFXN1-205ENST00000506963 PCDH11YQ9BZA8 1340 aa13.02□□□□□ -0.33
SFXN1-205ENST00000506963 SBF2Q86WG5 1849 aa13.02□□□□□ -0.33
SFXN1-205ENST00000506963 U2SURPO15042 1029 aaKnown RBP13.01□□□□□ -0.33
SFXN1-205ENST00000506963 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
SFXN1-205ENST00000506963 PLEKHO1Q53GL0 409 aaPredicted RBP13.01□□□□□ -0.33
SFXN1-205ENST00000506963 RSPH6AQ9H0K4 717 aa13.01□□□□□ -0.33
SFXN1-205ENST00000506963 SOCS7O14512 581 aa13□□□□□ -0.33
SFXN1-205ENST00000506963 CYP27B1O15528 508 aa13□□□□□ -0.33
SFXN1-205ENST00000506963 HMOX1P09601 288 aa13□□□□□ -0.33
SFXN1-205ENST00000506963 U2AF1L5P0DN76 240 aaPredicted RBP13□□□□□ -0.33
SFXN1-205ENST00000506963 U2AF1Q01081 240 aaKnown RBP eCLIP13□□□□□ -0.33
SFXN1-205ENST00000506963 CCDC125Q86Z20 511 aa13□□□□□ -0.33
SFXN1-205ENST00000506963 UPF1Q92900 1129 aaKnown RBP eCLIP12.99□□□□□ -0.33
SFXN1-205ENST00000506963 NHSQ6T4R5 1651 aa12.99□□□□□ -0.33
SFXN1-205ENST00000506963 PHKG2P15735 406 aa12.98□□□□□ -0.33
SFXN1-205ENST00000506963 FAM182BQ5T319 152 aa12.98□□□□□ -0.33
SFXN1-205ENST00000506963 IFNL2Q8IZJ0 200 aa12.98□□□□□ -0.33
SFXN1-205ENST00000506963 DDX54Q8TDD1 881 aaKnown RBP12.98□□□□□ -0.33
SFXN1-205ENST00000506963 TNS1Q9HBL0 1735 aaKnown RBP12.98□□□□□ -0.33
SFXN1-205ENST00000506963 ADAMTS7Q9UKP4 1686 aa12.97□□□□□ -0.33
SFXN1-205ENST00000506963 PRKAR2BP31323 418 aa12.97□□□□□ -0.33
SFXN1-205ENST00000506963 PNNQ9H307 717 aaKnown RBP12.97□□□□□ -0.33
SFXN1-205ENST00000506963 HSP90AB1P08238 724 aaKnown RBP12.96□□□□□ -0.33
SFXN1-205ENST00000506963 PLEKHF1Q96S99 279 aa12.96□□□□□ -0.33
SFXN1-205ENST00000506963 BCL11BQ9C0K0 894 aaPredicted RBP12.96□□□□□ -0.33
SFXN1-205ENST00000506963 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.34
SFXN1-205ENST00000506963 MTHFSDQ2M296 383 aaKnown RBP12.95□□□□□ -0.34
SFXN1-205ENST00000506963 CCDC184Q52MB2 194 aa12.95□□□□□ -0.34
SFXN1-205ENST00000506963 AKAP4Q5JQC9 854 aa12.95□□□□□ -0.34
SFXN1-205ENST00000506963 DIEXFQ68CQ4 756 aaKnown RBP12.95□□□□□ -0.34
SFXN1-205ENST00000506963 ZNF530Q6P9A1 599 aaPredicted RBP12.95□□□□□ -0.34
SFXN1-205ENST00000506963 GAS2L2Q8NHY3 880 aa12.95□□□□□ -0.34
SFXN1-205ENST00000506963 TOGARAM1Q9Y4F4 1720 aa12.95□□□□□ -0.34
SFXN1-205ENST00000506963 EP400Q96L91 3159 aa12.95□□□□□ -0.34
SFXN1-205ENST00000506963 RGPD3A6NKT7 1758 aaPredicted RBP12.94□□□□□ -0.34
SFXN1-205ENST00000506963 RGPD4Q7Z3J3 1758 aa12.94□□□□□ -0.34
SFXN1-205ENST00000506963 WDR43Q15061 677 aaKnown RBP eCLIP12.94□□□□□ -0.34
SFXN1-205ENST00000506963 PNISRQ8TF01 805 aaKnown RBP12.94□□□□□ -0.34
SFXN1-205ENST00000506963 DCAF5Q96JK2 942 aa12.94□□□□□ -0.34
SFXN1-205ENST00000506963 PHACTR3Q96KR7 559 aa12.94□□□□□ -0.34
SFXN1-205ENST00000506963 KDM6AO15550 1401 aaPredicted RBP12.94□□□□□ -0.34
SFXN1-205ENST00000506963 SCN11AQ9UI33 1791 aa12.94□□□□□ -0.34
SFXN1-205ENST00000506963 KAT6BQ8WYB5 2073 aa12.93□□□□□ -0.34
SFXN1-205ENST00000506963 ITGB4P16144 1822 aa12.93□□□□□ -0.34
SFXN1-205ENST00000506963 CCER2I3L3R5 266 aa12.93□□□□□ -0.34
SFXN1-205ENST00000506963 TRIM37O94972 964 aa12.93□□□□□ -0.34
SFXN1-205ENST00000506963 C1orf141Q5JVX7 400 aa12.93□□□□□ -0.34
SFXN1-205ENST00000506963 MRS2Q9HD23 443 aa12.93□□□□□ -0.34
SFXN1-205ENST00000506963 ADAMTS8Q9UP79 889 aa12.93□□□□□ -0.34
SFXN1-205ENST00000506963 ERVV-2B6SEH9 535 aa12.92□□□□□ -0.34
SFXN1-205ENST00000506963 BTAF1O14981 1849 aa12.92□□□□□ -0.34
SFXN1-205ENST00000506963 MAP3K5Q99683 1374 aa12.92□□□□□ -0.34
SFXN1-205ENST00000506963 MRC1P22897 1456 aa12.91□□□□□ -0.34
SFXN1-205ENST00000506963 VIRMAQ69YN4 1812 aaKnown RBP12.91□□□□□ -0.34
SFXN1-205ENST00000506963 PLSCR1O15162 318 aa12.91□□□□□ -0.34
SFXN1-205ENST00000506963 KCNQ2O43526 872 aa12.91□□□□□ -0.34
SFXN1-205ENST00000506963 HTATSF1O43719 755 aaKnown RBP12.91□□□□□ -0.34
SFXN1-205ENST00000506963 NEFMP07197 916 aa12.91□□□□□ -0.34
SFXN1-205ENST00000506963 PRIM1P49642 420 aaKnown RBP12.91□□□□□ -0.34
SFXN1-205ENST00000506963 GNAT3A8MTJ3 354 aa12.9□□□□□ -0.34
SFXN1-205ENST00000506963 SF3B2Q13435 895 aaKnown RBP12.9□□□□□ -0.34
SFXN1-205ENST00000506963 PTF1AQ7RTS3 328 aa12.9□□□□□ -0.34
SFXN1-205ENST00000506963 RUNDC1Q96C34 613 aa12.9□□□□□ -0.34
SFXN1-205ENST00000506963 CEMIPQ8WUJ3 1361 aa12.9□□□□□ -0.34
SFXN1-205ENST00000506963 DLG5Q8TDM6 1919 aa12.9□□□□□ -0.35
SFXN1-205ENST00000506963 MAPK8IP3Q9UPT6 1336 aa12.89□□□□□ -0.35
SFXN1-205ENST00000506963 BAG6P46379 1132 aa12.89□□□□□ -0.35
SFXN1-205ENST00000506963 NFE2L2Q16236 605 aa12.89□□□□□ -0.35
SFXN1-205ENST00000506963 ACSBG1Q96GR2 724 aa12.89□□□□□ -0.35
SFXN1-205ENST00000506963 RNMTO43148 476 aaKnown RBP12.88□□□□□ -0.35
SFXN1-205ENST00000506963 APBA3O96018 575 aa12.88□□□□□ -0.35
SFXN1-205ENST00000506963 MPRIPQ6WCQ1 1025 aa12.88□□□□□ -0.35
SFXN1-205ENST00000506963 CAMKK2Q96RR4 588 aa12.88□□□□□ -0.35
SFXN1-205ENST00000506963 SIPA1L3O60292 1781 aaPredicted RBP12.87□□□□□ -0.35
SFXN1-205ENST00000506963 RREB1Q92766 1687 aa12.87□□□□□ -0.35
SFXN1-205ENST00000506963 NCBP3Q53F19 620 aaKnown RBP12.87□□□□□ -0.35
SFXN1-205ENST00000506963 IL17REQ8NFR9 667 aa12.87□□□□□ -0.35
SFXN1-205ENST00000506963 PIGBQ92521 554 aa12.87□□□□□ -0.35
SFXN1-205ENST00000506963 LGR6Q9HBX8 967 aa12.87□□□□□ -0.35
SFXN1-205ENST00000506963 TMOD3Q9NYL9 352 aa12.87□□□□□ -0.35
SFXN1-205ENST00000506963 LY75O60449 1722 aa12.87□□□□□ -0.35
SFXN1-205ENST00000506963 TMPOP42166 694 aaKnown RBP12.86□□□□□ -0.35
SFXN1-205ENST00000506963 SYTL4Q96C24 671 aaPredicted RBP12.86□□□□□ -0.35
SFXN1-205ENST00000506963 SLC52A2Q9HAB3 445 aa12.86□□□□□ -0.35
SFXN1-205ENST00000506963 PAPPAQ13219 1627 aa12.85□□□□□ -0.35
SFXN1-205ENST00000506963 CABP4P57796 275 aa12.85□□□□□ -0.35
SFXN1-205ENST00000506963 DEFB132Q7Z7B7 95 aa12.85□□□□□ -0.35
SFXN1-205ENST00000506963 SMARCC1Q92922 1105 aaPredicted RBP12.85□□□□□ -0.35
SFXN1-205ENST00000506963 ZNF831Q5JPB2 1677 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms