RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 PRR20DP86480 221 aa7.8□□□□□ -1.16
CLDND1-213ENST00000506927 PRR20BP86481 221 aa7.8□□□□□ -1.16
CLDND1-213ENST00000506927 PRR20AP86496 221 aa7.8□□□□□ -1.16
CLDND1-213ENST00000506927 FAM9BQ8IZU0 186 aa7.8□□□□□ -1.16
CLDND1-213ENST00000506927 TMC1Q8TDI8 760 aa7.8□□□□□ -1.16
CLDND1-213ENST00000506927 NUDCQ9Y266 331 aa7.8□□□□□ -1.16
CLDND1-213ENST00000506927 RAPGEF6Q8TEU7 1601 aa7.8□□□□□ -1.16
CLDND1-213ENST00000506927 INSRP06213 1382 aa7.8□□□□□ -1.16
CLDND1-213ENST00000506927 TROQ12816 1431 aaPredicted RBP7.79□□□□□ -1.16
CLDND1-213ENST00000506927 NRG2O14511 850 aaPredicted RBP7.79□□□□□ -1.16
CLDND1-213ENST00000506927 LRRN4Q8WUT4 740 aa7.79□□□□□ -1.16
CLDND1-213ENST00000506927 BAP1Q92560 729 aa7.79□□□□□ -1.16
CLDND1-213ENST00000506927 CCDC136Q96JN2 1154 aa7.79□□□□□ -1.16
CLDND1-213ENST00000506927 CFDP1Q9UEE9 299 aaPredicted RBP7.79□□□□□ -1.16
CLDND1-213ENST00000506927 KIF15Q9NS87 1388 aa7.79□□□□□ -1.16
CLDND1-213ENST00000506927 ABCC5O15440 1437 aa7.78□□□□□ -1.16
CLDND1-213ENST00000506927 UHRF1BP1Q6BDS2 1440 aa7.78□□□□□ -1.16
CLDND1-213ENST00000506927 KIF14Q15058 1648 aa7.78□□□□□ -1.16
CLDND1-213ENST00000506927 TSPY4P0CV99 314 aa7.78□□□□□ -1.16
CLDND1-213ENST00000506927 TSPY10P0CW01 314 aa7.78□□□□□ -1.16
CLDND1-213ENST00000506927 WNT7BP56706 349 aa7.78□□□□□ -1.16
CLDND1-213ENST00000506927 LINC01559Q495D7 138 aa7.78□□□□□ -1.16
CLDND1-213ENST00000506927 RC3H1Q5TC82 1133 aaKnown RBP7.78□□□□□ -1.16
CLDND1-213ENST00000506927 BRD4O60885 1362 aaPredicted RBP7.78□□□□□ -1.16
CLDND1-213ENST00000506927 TEX14Q8IWB6 1497 aa7.78□□□□□ -1.16
CLDND1-213ENST00000506927 SHANK2Q9UPX8 1470 aa7.78□□□□□ -1.16
CLDND1-213ENST00000506927 KIAA0556O60303 1618 aa7.78□□□□□ -1.16
CLDND1-213ENST00000506927 ADCY10Q96PN6 1610 aa7.78□□□□□ -1.16
CLDND1-213ENST00000506927 MAGI3Q5TCQ9 1506 aa7.78□□□□□ -1.16
CLDND1-213ENST00000506927 KIF7Q2M1P5 1343 aa7.78□□□□□ -1.16
CLDND1-213ENST00000506927 WNT7AO00755 349 aa7.77□□□□□ -1.17
CLDND1-213ENST00000506927 SH3BP2P78314 561 aa7.77□□□□□ -1.17
CLDND1-213ENST00000506927 ZMYM4Q5VZL5 1548 aa7.77□□□□□ -1.17
CLDND1-213ENST00000506927 USP47Q96K76 1375 aa7.76□□□□□ -1.17
CLDND1-213ENST00000506927 PLEKHD1A6NEE1 506 aa7.76□□□□□ -1.17
CLDND1-213ENST00000506927 TCERG1O14776 1098 aaKnown RBP7.76□□□□□ -1.17
CLDND1-213ENST00000506927 USP17L8P0C7I0 530 aa7.76□□□□□ -1.17
CLDND1-213ENST00000506927 TMEM259Q4ZIN3 620 aa7.76□□□□□ -1.17
CLDND1-213ENST00000506927 ZNF511Q8NB15 262 aa7.76□□□□□ -1.17
CLDND1-213ENST00000506927 MRGPRX2Q96LB1 330 aa7.76□□□□□ -1.17
CLDND1-213ENST00000506927 USP35Q9P2H5 1018 aa7.76□□□□□ -1.17
CLDND1-213ENST00000506927 NOP58Q9Y2X3 529 aaKnown RBP7.76□□□□□ -1.17
CLDND1-213ENST00000506927 RNF123Q5XPI4 1314 aa7.76□□□□□ -1.17
CLDND1-213ENST00000506927 MAGI1Q96QZ7 1491 aaPredicted RBP7.75□□□□□ -1.17
CLDND1-213ENST00000506927 BCL11AQ9H165 835 aa7.75□□□□□ -1.17
CLDND1-213ENST00000506927 HMX1Q9NP08 348 aaPredicted RBP7.75□□□□□ -1.17
CLDND1-213ENST00000506927 MYBBP1AQ9BQG0 1328 aaKnown RBP7.75□□□□□ -1.17
CLDND1-213ENST00000506927 RALGAPBQ86X10 1494 aa7.75□□□□□ -1.17
CLDND1-213ENST00000506927 CROCC2H7BZ55 1655 aa7.74□□□□□ -1.17
CLDND1-213ENST00000506927 NR6A1Q15406 480 aa7.74□□□□□ -1.17
CLDND1-213ENST00000506927 CYP4X1Q8N118 509 aa7.74□□□□□ -1.17
CLDND1-213ENST00000506927 TOR4AQ9NXH8 423 aa7.74□□□□□ -1.17
CLDND1-213ENST00000506927 ANKRD50Q9ULJ7 1429 aa7.74□□□□□ -1.17
CLDND1-213ENST00000506927 DENND4BO75064 1496 aaPredicted RBP7.74□□□□□ -1.17
CLDND1-213ENST00000506927 CAMSAP2Q08AD1 1489 aa7.74□□□□□ -1.17
CLDND1-213ENST00000506927 PLEKHH2Q8IVE3 1493 aa7.74□□□□□ -1.17
CLDND1-213ENST00000506927 MBD5Q9P267 1494 aa7.74□□□□□ -1.17
CLDND1-213ENST00000506927 CDK13Q14004 1512 aaKnown RBP7.73□□□□□ -1.17
CLDND1-213ENST00000506927 KDM5DQ9BY66 1539 aa7.73□□□□□ -1.17
CLDND1-213ENST00000506927 CDCA8Q53HL2 280 aa7.73□□□□□ -1.17
CLDND1-213ENST00000506927 EHBP1Q8NDI1 1231 aa7.73□□□□□ -1.17
CLDND1-213ENST00000506927 ARMC2Q8NEN0 867 aa7.73□□□□□ -1.17
CLDND1-213ENST00000506927 EPS8L1Q8TE68 723 aa7.73□□□□□ -1.17
CLDND1-213ENST00000506927 IPO9Q96P70 1041 aaKnown RBP7.73□□□□□ -1.17
CLDND1-213ENST00000506927 CARD11Q9BXL7 1154 aa7.73□□□□□ -1.17
CLDND1-213ENST00000506927 NUP153P49790 1475 aaKnown RBP7.73□□□□□ -1.17
CLDND1-213ENST00000506927 GRIN2AQ12879 1464 aa7.73□□□□□ -1.17
CLDND1-213ENST00000506927 TTC24A2A3L6 582 aaPredicted RBP7.72□□□□□ -1.17
CLDND1-213ENST00000506927 PPM1GO15355 546 aaPredicted RBP7.72□□□□□ -1.17
CLDND1-213ENST00000506927 TRAF7Q6Q0C0 670 aa7.72□□□□□ -1.17
CLDND1-213ENST00000506927 NLRP13Q86W25 1043 aa7.72□□□□□ -1.17
CLDND1-213ENST00000506927 SNIP1Q8TAD8 396 aaKnown RBP7.72□□□□□ -1.17
CLDND1-213ENST00000506927 FOXJ1Q92949 421 aa7.72□□□□□ -1.17
CLDND1-213ENST00000506927 PZPP20742 1482 aa7.72□□□□□ -1.17
CLDND1-213ENST00000506927 GPATCH8Q9UKJ3 1502 aaKnown RBP7.72□□□□□ -1.17
CLDND1-213ENST00000506927 FAM187AA6NFU0 413 aa7.71□□□□□ -1.18
CLDND1-213ENST00000506927 SIAH2O43255 324 aa7.71□□□□□ -1.18
CLDND1-213ENST00000506927 NBPF8Q3BBV2 869 aa7.71□□□□□ -1.18
CLDND1-213ENST00000506927 B4GALNT3Q6L9W6 998 aa7.71□□□□□ -1.18
CLDND1-213ENST00000506927 NGEFQ8N5V2 710 aa7.71□□□□□ -1.18
CLDND1-213ENST00000506927 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.71□□□□□ -1.18
CLDND1-213ENST00000506927 PNISRQ8TF01 805 aaKnown RBP7.71□□□□□ -1.18
CLDND1-213ENST00000506927 CHMP7Q8WUX9 453 aaPredicted RBP7.71□□□□□ -1.18
CLDND1-213ENST00000506927 DISP1Q96F81 1524 aa7.71□□□□□ -1.18
CLDND1-213ENST00000506927 KDM5CP41229 1560 aa7.71□□□□□ -1.18
CLDND1-213ENST00000506927 ARHGEF5Q12774 1597 aa7.71□□□□□ -1.18
CLDND1-213ENST00000506927 KDM6BO15054 1643 aa7.7□□□□□ -1.18
CLDND1-213ENST00000506927 VARSP26640 1264 aaKnown RBP7.7□□□□□ -1.18
CLDND1-213ENST00000506927 AGERQ15109 404 aa7.7□□□□□ -1.18
CLDND1-213ENST00000506927 PKDCCQ504Y2 493 aa7.7□□□□□ -1.18
CLDND1-213ENST00000506927 NBPF14Q5TI25 921 aa7.7□□□□□ -1.18
CLDND1-213ENST00000506927 BANK1Q8NDB2 785 aa7.7□□□□□ -1.18
CLDND1-213ENST00000506927 FKBPLQ9UIM3 349 aa7.7□□□□□ -1.18
CLDND1-213ENST00000506927 NUP155O75694 1391 aa7.7□□□□□ -1.18
CLDND1-213ENST00000506927 DHX29Q7Z478 1369 aaKnown RBP7.7□□□□□ -1.18
CLDND1-213ENST00000506927 SYNJ2O15056 1496 aa7.69□□□□□ -1.18
CLDND1-213ENST00000506927 J3QL48 77 aa7.69□□□□□ -1.18
CLDND1-213ENST00000506927 DGAT1O75907 488 aa7.69□□□□□ -1.18
CLDND1-213ENST00000506927 C4orf48Q5BLP8 95 aa7.69□□□□□ -1.18
CLDND1-213ENST00000506927 BPHLQ86WA6 291 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms