RNA–Protein interactions for RNA: ENST00000506842.1

HERC6-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-207ENST00000506842 CFTRP13569 1480 aa8.19□□□□□ -1.1
HERC6-207ENST00000506842 PATL2C9JE40 543 aaKnown RBP8.18□□□□□ -1.1
HERC6-207ENST00000506842 DKK1O94907 266 aa8.18□□□□□ -1.1
HERC6-207ENST00000506842 CD2BP2O95400 341 aaKnown RBP8.18□□□□□ -1.1
HERC6-207ENST00000506842 KCNA1Q09470 495 aa8.18□□□□□ -1.1
HERC6-207ENST00000506842 OGFOD1Q8N543 542 aa8.18□□□□□ -1.1
HERC6-207ENST00000506842 MPNDQ8N594 471 aa8.18□□□□□ -1.1
HERC6-207ENST00000506842 ZBTB7BO15156 539 aaPredicted RBP8.17□□□□□ -1.1
HERC6-207ENST00000506842 ATP1A2P50993 1020 aa8.17□□□□□ -1.1
HERC6-207ENST00000506842 FAM69CQ0P6D2 419 aa8.17□□□□□ -1.1
HERC6-207ENST00000506842 OXLD1Q5BKU9 147 aa8.17□□□□□ -1.1
HERC6-207ENST00000506842 RC3H1Q5TC82 1133 aaKnown RBP8.17□□□□□ -1.1
HERC6-207ENST00000506842 ANKMY2Q8IV38 441 aa8.17□□□□□ -1.1
HERC6-207ENST00000506842 LARGE2Q8N3Y3 721 aa8.17□□□□□ -1.1
HERC6-207ENST00000506842 DNAAF2Q9NVR5 837 aaKnown RBP8.17□□□□□ -1.1
HERC6-207ENST00000506842 THOC2Q8NI27 1593 aaKnown RBP8.17□□□□□ -1.1
HERC6-207ENST00000506842 TOP2AP11388 1531 aaKnown RBP8.16□□□□□ -1.1
HERC6-207ENST00000506842 GTF2IP78347 998 aa8.16□□□□□ -1.1
HERC6-207ENST00000506842 INTS6LQ5JSJ4 861 aaKnown RBP8.16□□□□□ -1.1
HERC6-207ENST00000506842 SIX5Q8N196 739 aa8.16□□□□□ -1.1
HERC6-207ENST00000506842 EHBP1Q8NDI1 1231 aa8.16□□□□□ -1.1
HERC6-207ENST00000506842 SIRT1Q96EB6 747 aa8.16□□□□□ -1.1
HERC6-207ENST00000506842 PCDHB11Q9Y5F2 797 aa8.16□□□□□ -1.1
HERC6-207ENST00000506842 PCDHGA11Q9Y5H2 935 aa8.16□□□□□ -1.1
HERC6-207ENST00000506842 SIAH2O43255 324 aa8.15□□□□□ -1.1
HERC6-207ENST00000506842 USP4Q13107 963 aa8.15□□□□□ -1.1
HERC6-207ENST00000506842 VASH1Q7L8A9 365 aaPredicted RBP8.15□□□□□ -1.1
HERC6-207ENST00000506842 FAM200AQ8TCP9 573 aa8.15□□□□□ -1.1
HERC6-207ENST00000506842 KIAA1024Q9UPX6 916 aa8.15□□□□□ -1.1
HERC6-207ENST00000506842 KIF21AQ7Z4S6 1674 aa8.14□□□□□ -1.11
HERC6-207ENST00000506842 GRM5P41594 1212 aa8.14□□□□□ -1.11
HERC6-207ENST00000506842 DPYDQ12882 1025 aa8.14□□□□□ -1.11
HERC6-207ENST00000506842 CLP1Q92989 425 aaKnown RBP8.14□□□□□ -1.11
HERC6-207ENST00000506842 SLAIN2Q9P270 581 aa8.14□□□□□ -1.11
HERC6-207ENST00000506842 ERVH48-1M5A8F1 160 aa8.13□□□□□ -1.11
HERC6-207ENST00000506842 WNT7AO00755 349 aa8.13□□□□□ -1.11
HERC6-207ENST00000506842 SWI5Q1ZZU3 235 aa8.13□□□□□ -1.11
HERC6-207ENST00000506842 B4GALNT3Q6L9W6 998 aa8.13□□□□□ -1.11
HERC6-207ENST00000506842 ZNF594Q96JF6 807 aaPredicted RBP8.13□□□□□ -1.11
HERC6-207ENST00000506842 FANCD2Q9BXW9 1451 aa8.13□□□□□ -1.11
HERC6-207ENST00000506842 MRC2Q9UBG0 1479 aa8.13□□□□□ -1.11
HERC6-207ENST00000506842 SLC19A1P41440 591 aa8.12□□□□□ -1.11
HERC6-207ENST00000506842 ERVK-9P63128 1117 aa8.12□□□□□ -1.11
HERC6-207ENST00000506842 CCDC102BQ68D86 513 aa8.12□□□□□ -1.11
HERC6-207ENST00000506842 PHLDB3Q6NSJ2 640 aa8.12□□□□□ -1.11
HERC6-207ENST00000506842 CCDC88BA6NC98 1476 aa8.12□□□□□ -1.11
HERC6-207ENST00000506842 GNEQ9Y223 722 aaKnown RBP8.11□□□□□ -1.11
HERC6-207ENST00000506842 TLL2Q9Y6L7 1015 aa8.11□□□□□ -1.11
HERC6-207ENST00000506842 WDR62O43379 1518 aa8.1□□□□□ -1.11
HERC6-207ENST00000506842 ADH1CP00326 375 aa8.1□□□□□ -1.11
HERC6-207ENST00000506842 FSHRP23945 695 aa8.1□□□□□ -1.11
HERC6-207ENST00000506842 SSFA2P28290 1259 aa8.1□□□□□ -1.11
HERC6-207ENST00000506842 SCTRP47872 440 aa8.1□□□□□ -1.11
HERC6-207ENST00000506842 SEC13P55735 322 aa8.1□□□□□ -1.11
HERC6-207ENST00000506842 RAB15P59190 212 aa8.1□□□□□ -1.11
HERC6-207ENST00000506842 DHX9Q08211 1270 aaKnown RBP8.1□□□□□ -1.11
HERC6-207ENST00000506842 ARID5BQ14865 1188 aa8.1□□□□□ -1.11
HERC6-207ENST00000506842 SPRYD7Q5W111 196 aa8.1□□□□□ -1.11
HERC6-207ENST00000506842 TPCN2Q8NHX9 752 aa8.1□□□□□ -1.11
HERC6-207ENST00000506842 CEP164Q9UPV0 1460 aa8.1□□□□□ -1.11
HERC6-207ENST00000506842 MYCP01106 439 aaPredicted RBP8.09□□□□□ -1.11
HERC6-207ENST00000506842 NR5A1Q13285 461 aa8.09□□□□□ -1.11
HERC6-207ENST00000506842 CC2D2BQ6DHV5 1058 aa8.09□□□□□ -1.11
HERC6-207ENST00000506842 MRGPRX2Q96LB1 330 aa8.09□□□□□ -1.11
HERC6-207ENST00000506842 GZF1Q9H116 711 aaPredicted RBP8.09□□□□□ -1.11
HERC6-207ENST00000506842 CCDC9Q9Y3X0 531 aaKnown RBP8.09□□□□□ -1.11
HERC6-207ENST00000506842 A0A0G2JS52 829 aa8.08□□□□□ -1.12
HERC6-207ENST00000506842 M0R2N6 131 aa8.08□□□□□ -1.12
HERC6-207ENST00000506842 TXNDC2Q86VQ3 553 aa8.08□□□□□ -1.12
HERC6-207ENST00000506842 OSBPL3Q9H4L5 887 aa8.08□□□□□ -1.12
HERC6-207ENST00000506842 SFI1A8K8P3 1242 aa8.07□□□□□ -1.12
HERC6-207ENST00000506842 CCDC116Q8IYX3 515 aa8.07□□□□□ -1.12
HERC6-207ENST00000506842 TRIM52Q96A61 297 aa8.07□□□□□ -1.12
HERC6-207ENST00000506842 TMPRSS4Q9NRS4 437 aa8.07□□□□□ -1.12
HERC6-207ENST00000506842 IVNS1ABPQ9Y6Y0 642 aa8.07□□□□□ -1.12
HERC6-207ENST00000506842 LILRA1O75019 489 aa8.06□□□□□ -1.12
HERC6-207ENST00000506842 ATP2B4P23634 1241 aa8.06□□□□□ -1.12
HERC6-207ENST00000506842 PSME1Q06323 249 aa8.06□□□□□ -1.12
HERC6-207ENST00000506842 OCLNQ16625 522 aa8.06□□□□□ -1.12
HERC6-207ENST00000506842 PPP1R26Q5T8A7 1209 aaPredicted RBP8.06□□□□□ -1.12
HERC6-207ENST00000506842 ZNF598Q86UK7 904 aaKnown RBP8.06□□□□□ -1.12
HERC6-207ENST00000506842 ZNF784Q8NCA9 323 aaPredicted RBP8.06□□□□□ -1.12
HERC6-207ENST00000506842 C1orf216Q8TAB5 229 aa8.06□□□□□ -1.12
HERC6-207ENST00000506842 RBM19Q9Y4C8 960 aaKnown RBP8.06□□□□□ -1.12
HERC6-207ENST00000506842 TMEM229AB2RXF0 380 aa8.05□□□□□ -1.12
HERC6-207ENST00000506842 WASLO00401 505 aaPredicted RBP8.05□□□□□ -1.12
HERC6-207ENST00000506842 NR3C2P08235 984 aa8.05□□□□□ -1.12
HERC6-207ENST00000506842 ZNF697Q5TEC3 545 aa8.05□□□□□ -1.12
HERC6-207ENST00000506842 CYLDQ9NQC7 956 aa8.05□□□□□ -1.12
HERC6-207ENST00000506842 PKD2L1Q9P0L9 805 aa8.05□□□□□ -1.12
HERC6-207ENST00000506842 URB2Q14146 1524 aaKnown RBP8.04□□□□□ -1.12
HERC6-207ENST00000506842 SCNN1DP51172 638 aa8.04□□□□□ -1.12
HERC6-207ENST00000506842 MYT1Q01538 1121 aa8.04□□□□□ -1.12
HERC6-207ENST00000506842 TMCO4Q5TGY1 634 aa8.04□□□□□ -1.12
HERC6-207ENST00000506842 ZNF358Q9NW07 568 aa8.04□□□□□ -1.12
HERC6-207ENST00000506842 PLA2G2EQ9NZK7 142 aa8.04□□□□□ -1.12
HERC6-207ENST00000506842 V9GY48 417 aaPredicted RBP8.04□□□□□ -1.12
HERC6-207ENST00000506842 ARID4AP29374 1257 aaPredicted RBP8.03□□□□□ -1.12
HERC6-207ENST00000506842 TAS1R3Q7RTX0 852 aa8.03□□□□□ -1.12
HERC6-207ENST00000506842 CCER1Q8TC90 406 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms