RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 RTL1A6NKG5 1358 aa15.86■□□□□ 0.13
CCHCR1-220ENST00000506831 PRIM1P49642 420 aaKnown RBP15.85■□□□□ 0.13
CCHCR1-220ENST00000506831 COL24A1Q17RW2 1714 aa15.84■□□□□ 0.13
CCHCR1-220ENST00000506831 FYB1O15117 783 aa15.83■□□□□ 0.12
CCHCR1-220ENST00000506831 HMGB2P26583 209 aaKnown RBP15.83■□□□□ 0.12
CCHCR1-220ENST00000506831 ZNF784Q8NCA9 323 aaPredicted RBP15.83■□□□□ 0.12
CCHCR1-220ENST00000506831 LY75O60449 1722 aa15.82■□□□□ 0.12
CCHCR1-220ENST00000506831 FBLN1P23142 703 aa15.82■□□□□ 0.12
CCHCR1-220ENST00000506831 POLD1P28340 1107 aa15.82■□□□□ 0.12
CCHCR1-220ENST00000506831 TMF1P82094 1093 aa15.82■□□□□ 0.12
CCHCR1-220ENST00000506831 SYTL4Q96C24 671 aaPredicted RBP15.82■□□□□ 0.12
CCHCR1-220ENST00000506831 TFCP2L1Q9NZI6 479 aa15.82■□□□□ 0.12
CCHCR1-220ENST00000506831 PNPLA7Q6ZV29 1317 aa15.82■□□□□ 0.12
CCHCR1-220ENST00000506831 RGPD2P0DJD1 1756 aa15.82■□□□□ 0.12
CCHCR1-220ENST00000506831 MEGF6O75095 1541 aa15.81■□□□□ 0.12
CCHCR1-220ENST00000506831 NSD2O96028 1365 aa15.81■□□□□ 0.12
CCHCR1-220ENST00000506831 KIF24Q5T7B8 1368 aa15.81■□□□□ 0.12
CCHCR1-220ENST00000506831 NBPF6Q5VWK0 638 aa15.81■□□□□ 0.12
CCHCR1-220ENST00000506831 DOT1LQ8TEK3 1739 aa15.81■□□□□ 0.12
CCHCR1-220ENST00000506831 NBPF4Q96M43 638 aa15.81■□□□□ 0.12
CCHCR1-220ENST00000506831 SHANK3Q9BYB0 1731 aa15.81■□□□□ 0.12
CCHCR1-220ENST00000506831 CDCA8Q53HL2 280 aa15.8■□□□□ 0.12
CCHCR1-220ENST00000506831 SMG6Q86US8 1419 aaKnown RBP15.79■□□□□ 0.12
CCHCR1-220ENST00000506831 RRS1Q15050 365 aaKnown RBP15.79■□□□□ 0.12
CCHCR1-220ENST00000506831 RAPGEF4Q8WZA2 1011 aa15.79■□□□□ 0.12
CCHCR1-220ENST00000506831 GGNBP2Q9H3C7 697 aa15.79■□□□□ 0.12
CCHCR1-220ENST00000506831 INSRP06213 1382 aa15.78■□□□□ 0.12
CCHCR1-220ENST00000506831 USP47Q96K76 1375 aa15.78■□□□□ 0.12
CCHCR1-220ENST00000506831 CCNL1Q9UK58 526 aaPredicted RBP15.78■□□□□ 0.12
CCHCR1-220ENST00000506831 TUBGCP6Q96RT7 1819 aa15.78■□□□□ 0.12
CCHCR1-220ENST00000506831 TATP17735 454 aaPredicted RBP15.77■□□□□ 0.12
CCHCR1-220ENST00000506831 GPR162Q16538 588 aa15.77■□□□□ 0.12
CCHCR1-220ENST00000506831 GOLGB1Q14789 3259 aaKnown RBP15.77■□□□□ 0.11
CCHCR1-220ENST00000506831 FLT4P35916 1363 aa15.76■□□□□ 0.11
CCHCR1-220ENST00000506831 KCNQ4P56696 695 aa15.76■□□□□ 0.11
CCHCR1-220ENST00000506831 TIMELESSQ9UNS1 1208 aa15.76■□□□□ 0.11
CCHCR1-220ENST00000506831 PCDH11XQ9BZA7 1347 aa15.75■□□□□ 0.11
CCHCR1-220ENST00000506831 PCDH11YQ9BZA8 1340 aa15.75■□□□□ 0.11
CCHCR1-220ENST00000506831 HSP90AB2PQ58FF8 381 aa15.75■□□□□ 0.11
CCHCR1-220ENST00000506831 USHBP1Q8N6Y0 703 aa15.74■□□□□ 0.11
CCHCR1-220ENST00000506831 KIF20BQ96Q89 1820 aa15.73■□□□□ 0.11
CCHCR1-220ENST00000506831 COL23A1Q86Y22 540 aaPredicted RBP15.73■□□□□ 0.11
CCHCR1-220ENST00000506831 FLAD1Q8NFF5 587 aa15.73■□□□□ 0.11
CCHCR1-220ENST00000506831 KLHL34Q8N239 644 aa15.72■□□□□ 0.11
CCHCR1-220ENST00000506831 GRIN3BO60391 1043 aa15.71■□□□□ 0.11
CCHCR1-220ENST00000506831 NCAPD2Q15021 1401 aa15.7■□□□□ 0.1
CCHCR1-220ENST00000506831 CYP27B1O15528 508 aa15.7■□□□□ 0.1
CCHCR1-220ENST00000506831 C1QTNF8P60827 252 aa15.7■□□□□ 0.1
CCHCR1-220ENST00000506831 NLGN2Q8NFZ4 835 aa15.7■□□□□ 0.1
CCHCR1-220ENST00000506831 SMARCC1Q92922 1105 aaPredicted RBP15.7■□□□□ 0.1
CCHCR1-220ENST00000506831 CARD14Q9BXL6 1004 aa15.7■□□□□ 0.1
CCHCR1-220ENST00000506831 PALLDQ8WX93 1383 aa15.7■□□□□ 0.1
CCHCR1-220ENST00000506831 C5P01031 1676 aa15.7■□□□□ 0.1
CCHCR1-220ENST00000506831 TAF1LQ8IZX4 1826 aa15.69■□□□□ 0.1
CCHCR1-220ENST00000506831 MSH5O43196 834 aa15.69■□□□□ 0.1
CCHCR1-220ENST00000506831 NKX1-1Q15270 411 aaPredicted RBP15.69■□□□□ 0.1
CCHCR1-220ENST00000506831 MPRIPQ6WCQ1 1025 aa15.69■□□□□ 0.1
CCHCR1-220ENST00000506831 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.68■□□□□ 0.1
CCHCR1-220ENST00000506831 CD2APQ9Y5K6 639 aa15.68■□□□□ 0.1
CCHCR1-220ENST00000506831 PKD1L3Q7Z443 1732 aa15.68■□□□□ 0.1
CCHCR1-220ENST00000506831 WASHC2AQ641Q2 1341 aa15.68■□□□□ 0.1
CCHCR1-220ENST00000506831 ITGB4P16144 1822 aa15.67■□□□□ 0.1
CCHCR1-220ENST00000506831 PELP1Q8IZL8 1130 aaKnown RBP15.67■□□□□ 0.1
CCHCR1-220ENST00000506831 SPG7Q9UQ90 795 aa15.67■□□□□ 0.1
CCHCR1-220ENST00000506831 EMILIN1Q9Y6C2 1016 aa15.67■□□□□ 0.1
CCHCR1-220ENST00000506831 NSD3Q9BZ95 1437 aa15.67■□□□□ 0.1
CCHCR1-220ENST00000506831 ANKRD26Q9UPS8 1709 aa15.65■□□□□ 0.1
CCHCR1-220ENST00000506831 PIGBQ92521 554 aa15.65■□□□□ 0.1
CCHCR1-220ENST00000506831 MAP2P11137 1827 aaKnown RBP15.65■□□□□ 0.1
CCHCR1-220ENST00000506831 PLEKHG2Q9H7P9 1386 aa15.64■□□□□ 0.09
CCHCR1-220ENST00000506831 GIGYF1O75420 1035 aaPredicted RBP15.64■□□□□ 0.09
CCHCR1-220ENST00000506831 C4BP0C0L5 1744 aa15.64■□□□□ 0.09
CCHCR1-220ENST00000506831 YBX3P16989 372 aaKnown RBP eCLIP15.64■□□□□ 0.09
CCHCR1-220ENST00000506831 ZEB1P37275 1124 aaPredicted RBP15.64■□□□□ 0.09
CCHCR1-220ENST00000506831 AK7Q96M32 723 aa15.64■□□□□ 0.09
CCHCR1-220ENST00000506831 TOGARAM1Q9Y4F4 1720 aa15.64■□□□□ 0.09
CCHCR1-220ENST00000506831 SENP3-EIF4A1A0A087X0R7 540 aa15.63■□□□□ 0.09
CCHCR1-220ENST00000506831 MSL1Q68DK7 614 aa15.63■□□□□ 0.09
CCHCR1-220ENST00000506831 EYA1Q99502 592 aa15.63■□□□□ 0.09
CCHCR1-220ENST00000506831 PPM1GO15355 546 aaPredicted RBP15.62■□□□□ 0.09
CCHCR1-220ENST00000506831 SSFA2P28290 1259 aa15.62■□□□□ 0.09
CCHCR1-220ENST00000506831 POLKQ9UBT6 870 aa15.62■□□□□ 0.09
CCHCR1-220ENST00000506831 UBR3Q6ZT12 1888 aa15.62■□□□□ 0.09
CCHCR1-220ENST00000506831 LOC102724428A0A0B4J2F2 783 aa15.61■□□□□ 0.09
CCHCR1-220ENST00000506831 SIK1P57059 783 aa15.61■□□□□ 0.09
CCHCR1-220ENST00000506831 IFNL2Q8IZJ0 200 aa15.61■□□□□ 0.09
CCHCR1-220ENST00000506831 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.6■□□□□ 0.09
CCHCR1-220ENST00000506831 TMOD3Q9NYL9 352 aa15.6■□□□□ 0.09
CCHCR1-220ENST00000506831 PHKG2P15735 406 aa15.59■□□□□ 0.09
CCHCR1-220ENST00000506831 AMIGO3Q86WK7 504 aa15.59■□□□□ 0.09
CCHCR1-220ENST00000506831 PHF14O94880 888 aa15.57■□□□□ 0.08
CCHCR1-220ENST00000506831 LINC00116Q8NCU8 138 aa15.57■□□□□ 0.08
CCHCR1-220ENST00000506831 ASAP1Q9ULH1 1129 aa15.57■□□□□ 0.08
CCHCR1-220ENST00000506831 ATP6V1AP38606 617 aa15.56■□□□□ 0.08
CCHCR1-220ENST00000506831 EIF4A2Q14240 407 aaKnown RBP15.56■□□□□ 0.08
CCHCR1-220ENST00000506831 ATP10DQ9P241 1426 aa15.55■□□□□ 0.08
CCHCR1-220ENST00000506831 ERVV-2B6SEH9 535 aa15.55■□□□□ 0.08
CCHCR1-220ENST00000506831 HSP90AB1P08238 724 aaKnown RBP15.55■□□□□ 0.08
CCHCR1-220ENST00000506831 ATG3Q9NT62 314 aa15.55■□□□□ 0.08
CCHCR1-220ENST00000506831 ZNF831Q5JPB2 1677 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms