RNA–Protein interactions for RNA: ENST00000506789.5

CDK7-205, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-205ENST00000506789 PARD3Q8TEW0 1356 aa17.16■□□□□ 0.34
CDK7-205ENST00000506789 NPM3O75607 178 aaKnown RBP17.16■□□□□ 0.34
CDK7-205ENST00000506789 PPP2R1AP30153 589 aa17.16■□□□□ 0.34
CDK7-205ENST00000506789 NUDCQ9Y266 331 aa17.16■□□□□ 0.34
CDK7-205ENST00000506789 USHBP1Q8N6Y0 703 aa17.15■□□□□ 0.34
CDK7-205ENST00000506789 ZCRB1Q8TBF4 217 aaKnown RBP17.15■□□□□ 0.34
CDK7-205ENST00000506789 IGSF1Q8N6C5 1336 aa17.15■□□□□ 0.34
CDK7-205ENST00000506789 NCAPD2Q15021 1401 aa17.14■□□□□ 0.33
CDK7-205ENST00000506789 IL13P35225 146 aa17.14■□□□□ 0.33
CDK7-205ENST00000506789 SPG7Q9UQ90 795 aa17.14■□□□□ 0.33
CDK7-205ENST00000506789 RGPD2P0DJD1 1756 aa17.14■□□□□ 0.33
CDK7-205ENST00000506789 PCDH11XQ9BZA7 1347 aa17.13■□□□□ 0.33
CDK7-205ENST00000506789 PCDH11YQ9BZA8 1340 aa17.13■□□□□ 0.33
CDK7-205ENST00000506789 DDX54Q8TDD1 881 aaKnown RBP17.12■□□□□ 0.33
CDK7-205ENST00000506789 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDK7-205ENST00000506789 BCL9O00512 1426 aa17.12■□□□□ 0.33
CDK7-205ENST00000506789 MEGF6O75095 1541 aa17.11■□□□□ 0.33
CDK7-205ENST00000506789 MARCH10Q8NA82 808 aaPredicted RBP17.11■□□□□ 0.33
CDK7-205ENST00000506789 MYBBP1AQ9BQG0 1328 aaKnown RBP17.11■□□□□ 0.33
CDK7-205ENST00000506789 AMOTQ4VCS5 1084 aa17.1■□□□□ 0.33
CDK7-205ENST00000506789 FAM182BQ5T319 152 aa17.1■□□□□ 0.33
CDK7-205ENST00000506789 SULT6B1Q6IMI4 303 aa17.1■□□□□ 0.33
CDK7-205ENST00000506789 U2SURPO15042 1029 aaKnown RBP17.09■□□□□ 0.33
CDK7-205ENST00000506789 BAG6P46379 1132 aa17.09■□□□□ 0.33
CDK7-205ENST00000506789 PLEKHO1Q53GL0 409 aaPredicted RBP17.09■□□□□ 0.33
CDK7-205ENST00000506789 RGPD1P0DJD0 1748 aa17.09■□□□□ 0.33
CDK7-205ENST00000506789 KDRP35968 1356 aa17.08■□□□□ 0.32
CDK7-205ENST00000506789 RNF39Q9H2S5 420 aa17.08■□□□□ 0.32
CDK7-205ENST00000506789 ANP32CO43423 234 aa17.07■□□□□ 0.32
CDK7-205ENST00000506789 TRIM37O94972 964 aa17.07■□□□□ 0.32
CDK7-205ENST00000506789 PRKRIP1Q9H875 184 aaPredicted RBP17.07■□□□□ 0.32
CDK7-205ENST00000506789 COL3A1P02461 1466 aaPredicted RBP17.06■□□□□ 0.32
CDK7-205ENST00000506789 EP400Q96L91 3159 aa17.06■□□□□ 0.32
CDK7-205ENST00000506789 NEFMP07197 916 aa17.06■□□□□ 0.32
CDK7-205ENST00000506789 HSP90AB1P08238 724 aaKnown RBP17.06■□□□□ 0.32
CDK7-205ENST00000506789 PNNQ9H307 717 aaKnown RBP17.06■□□□□ 0.32
CDK7-205ENST00000506789 PKD1L3Q7Z443 1732 aa17.05■□□□□ 0.32
CDK7-205ENST00000506789 IFNL2Q8IZJ0 200 aa17.05■□□□□ 0.32
CDK7-205ENST00000506789 BCL11BQ9C0K0 894 aaPredicted RBP17.05■□□□□ 0.32
CDK7-205ENST00000506789 U2AF1L5P0DN76 240 aaPredicted RBP17.04■□□□□ 0.32
CDK7-205ENST00000506789 U2AF1Q01081 240 aaKnown RBP eCLIP17.04■□□□□ 0.32
CDK7-205ENST00000506789 C1orf141Q5JVX7 400 aa17.04■□□□□ 0.32
CDK7-205ENST00000506789 APBA3O96018 575 aa17.03■□□□□ 0.32
CDK7-205ENST00000506789 HMOX1P09601 288 aa17.03■□□□□ 0.32
CDK7-205ENST00000506789 AEBP1Q8IUX7 1158 aa17.03■□□□□ 0.32
CDK7-205ENST00000506789 ZNF530Q6P9A1 599 aaPredicted RBP17.02■□□□□ 0.32
CDK7-205ENST00000506789 FCHSD2O94868 740 aa17.01■□□□□ 0.31
CDK7-205ENST00000506789 SYTL4Q96C24 671 aaPredicted RBP17.01■□□□□ 0.31
CDK7-205ENST00000506789 CYP27B1O15528 508 aa17■□□□□ 0.31
CDK7-205ENST00000506789 PHKG2P15735 406 aa17■□□□□ 0.31
CDK7-205ENST00000506789 HMGB2P26583 209 aaKnown RBP17■□□□□ 0.31
CDK7-205ENST00000506789 NKX1-1Q15270 411 aaPredicted RBP17■□□□□ 0.31
CDK7-205ENST00000506789 GAS2L2Q8NHY3 880 aa17■□□□□ 0.31
CDK7-205ENST00000506789 ACSBG1Q96GR2 724 aa17■□□□□ 0.31
CDK7-205ENST00000506789 SHANK3Q9BYB0 1731 aa17■□□□□ 0.31
CDK7-205ENST00000506789 NHSQ6T4R5 1651 aa17■□□□□ 0.31
CDK7-205ENST00000506789 SBF2Q86WG5 1849 aa16.99■□□□□ 0.31
CDK7-205ENST00000506789 PLSCR1O15162 318 aa16.99■□□□□ 0.31
CDK7-205ENST00000506789 DCAF5Q96JK2 942 aa16.99■□□□□ 0.31
CDK7-205ENST00000506789 TNS1Q9HBL0 1735 aaKnown RBP16.99■□□□□ 0.31
CDK7-205ENST00000506789 WDR43Q15061 677 aaKnown RBP eCLIP16.98■□□□□ 0.31
CDK7-205ENST00000506789 AKAP4Q5JQC9 854 aa16.98■□□□□ 0.31
CDK7-205ENST00000506789 DEFB132Q7Z7B7 95 aa16.98■□□□□ 0.31
CDK7-205ENST00000506789 PRIM1P49642 420 aaKnown RBP16.97■□□□□ 0.31
CDK7-205ENST00000506789 PRKAR2BP31323 418 aa16.96■□□□□ 0.31
CDK7-205ENST00000506789 RSPH6AQ9H0K4 717 aa16.96■□□□□ 0.31
CDK7-205ENST00000506789 DOT1LQ8TEK3 1739 aa16.96■□□□□ 0.3
CDK7-205ENST00000506789 MAPK8IP3Q9UPT6 1336 aa16.96■□□□□ 0.3
CDK7-205ENST00000506789 ERVV-2B6SEH9 535 aa16.95■□□□□ 0.3
CDK7-205ENST00000506789 KCNQ2O43526 872 aa16.95■□□□□ 0.3
CDK7-205ENST00000506789 EN1Q05925 392 aaPredicted RBP16.95■□□□□ 0.3
CDK7-205ENST00000506789 TMOD3Q9NYL9 352 aa16.95■□□□□ 0.3
CDK7-205ENST00000506789 RGPD3A6NKT7 1758 aaPredicted RBP16.94■□□□□ 0.3
CDK7-205ENST00000506789 RGPD4Q7Z3J3 1758 aa16.94■□□□□ 0.3
CDK7-205ENST00000506789 MTHFSDQ2M296 383 aaKnown RBP16.93■□□□□ 0.3
CDK7-205ENST00000506789 MPRIPQ6WCQ1 1025 aa16.93■□□□□ 0.3
CDK7-205ENST00000506789 SMARCC1Q92922 1105 aaPredicted RBP16.93■□□□□ 0.3
CDK7-205ENST00000506789 CAMKK2Q96RR4 588 aa16.93■□□□□ 0.3
CDK7-205ENST00000506789 KCNA4P22459 653 aa16.92■□□□□ 0.3
CDK7-205ENST00000506789 KAT6BQ8WYB5 2073 aa16.92■□□□□ 0.3
CDK7-205ENST00000506789 GNAT3A8MTJ3 354 aa16.91■□□□□ 0.3
CDK7-205ENST00000506789 CABP4P57796 275 aa16.91■□□□□ 0.3
CDK7-205ENST00000506789 C1QBPQ07021 282 aaKnown RBP16.91■□□□□ 0.3
CDK7-205ENST00000506789 EZH2Q15910 746 aaKnown RBP16.91■□□□□ 0.3
CDK7-205ENST00000506789 NBPF14Q5TI25 921 aa16.91■□□□□ 0.3
CDK7-205ENST00000506789 RTF1Q92541 710 aaKnown RBP16.91■□□□□ 0.3
CDK7-205ENST00000506789 BTAF1O14981 1849 aa16.91■□□□□ 0.3
CDK7-205ENST00000506789 MAP3K5Q99683 1374 aa16.9■□□□□ 0.3
CDK7-205ENST00000506789 SLC27A3Q5K4L6 730 aa16.9■□□□□ 0.3
CDK7-205ENST00000506789 HTATSF1O43719 755 aaKnown RBP16.88■□□□□ 0.29
CDK7-205ENST00000506789 TXNRD1Q16881 649 aa16.88■□□□□ 0.29
CDK7-205ENST00000506789 PTF1AQ7RTS3 328 aa16.88■□□□□ 0.29
CDK7-205ENST00000506789 MRS2Q9HD23 443 aa16.88■□□□□ 0.29
CDK7-205ENST00000506789 RNMTO43148 476 aaKnown RBP16.87■□□□□ 0.29
CDK7-205ENST00000506789 TEFQ10587 303 aa16.87■□□□□ 0.29
CDK7-205ENST00000506789 PIGBQ92521 554 aa16.87■□□□□ 0.29
CDK7-205ENST00000506789 PHACTR3Q96KR7 559 aa16.87■□□□□ 0.29
CDK7-205ENST00000506789 TOGARAM1Q9Y4F4 1720 aa16.87■□□□□ 0.29
CDK7-205ENST00000506789 KDM6AO15550 1401 aaPredicted RBP16.87■□□□□ 0.29
CDK7-205ENST00000506789 LMOD3Q0VAK6 560 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms