RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 NSD2O96028 1365 aa13.01□□□□□ -0.33
COPS4-204ENST00000506443 CCDC7Q96M83 1385 aa13.01□□□□□ -0.33
COPS4-204ENST00000506443 TOGARAM1Q9Y4F4 1720 aa13□□□□□ -0.33
COPS4-204ENST00000506443 ERBB3P21860 1342 aa13□□□□□ -0.33
COPS4-204ENST00000506443 EXOC5O00471 708 aa13□□□□□ -0.33
COPS4-204ENST00000506443 CD163L1Q9NR16 1453 aa12.99□□□□□ -0.33
COPS4-204ENST00000506443 MSL1Q68DK7 614 aa12.99□□□□□ -0.33
COPS4-204ENST00000506443 ZNF526Q8TF50 670 aaPredicted RBP12.99□□□□□ -0.33
COPS4-204ENST00000506443 CDCA7Q9BWT1 371 aaPredicted RBP12.99□□□□□ -0.33
COPS4-204ENST00000506443 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
COPS4-204ENST00000506443 NLRP2Q9NX02 1062 aa12.98□□□□□ -0.33
COPS4-204ENST00000506443 ADCY9O60503 1353 aa12.97□□□□□ -0.33
COPS4-204ENST00000506443 C5P01031 1676 aa12.97□□□□□ -0.33
COPS4-204ENST00000506443 NME9Q86XW9 330 aa12.97□□□□□ -0.33
COPS4-204ENST00000506443 MEGF6O75095 1541 aa12.96□□□□□ -0.33
COPS4-204ENST00000506443 IL2RBP14784 551 aa12.95□□□□□ -0.34
COPS4-204ENST00000506443 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.95□□□□□ -0.34
COPS4-204ENST00000506443 TAF1LQ8IZX4 1826 aa12.95□□□□□ -0.34
COPS4-204ENST00000506443 KTN1Q86UP2 1357 aaKnown RBP12.94□□□□□ -0.34
COPS4-204ENST00000506443 SBNO2Q9Y2G9 1366 aa12.94□□□□□ -0.34
COPS4-204ENST00000506443 SMIM5Q71RC9 77 aa12.94□□□□□ -0.34
COPS4-204ENST00000506443 ANKRD24Q8TF21 1146 aa12.94□□□□□ -0.34
COPS4-204ENST00000506443 POLD1P28340 1107 aa12.93□□□□□ -0.34
COPS4-204ENST00000506443 AMIGO3Q86WK7 504 aa12.93□□□□□ -0.34
COPS4-204ENST00000506443 KCNH5Q8NCM2 988 aa12.93□□□□□ -0.34
COPS4-204ENST00000506443 DDX54Q8TDD1 881 aaKnown RBP12.93□□□□□ -0.34
COPS4-204ENST00000506443 TFCP2L1Q9NZI6 479 aa12.93□□□□□ -0.34
COPS4-204ENST00000506443 COL23A1Q86Y22 540 aaPredicted RBP12.92□□□□□ -0.34
COPS4-204ENST00000506443 SYTL4Q96C24 671 aaPredicted RBP12.92□□□□□ -0.34
COPS4-204ENST00000506443 LTV1Q96GA3 475 aaPredicted RBP12.92□□□□□ -0.34
COPS4-204ENST00000506443 TTC21AQ8NDW8 1320 aa12.91□□□□□ -0.34
COPS4-204ENST00000506443 ZNF692Q9BU19 519 aaPredicted RBP12.91□□□□□ -0.34
COPS4-204ENST00000506443 USP31Q70CQ4 1352 aa12.91□□□□□ -0.34
COPS4-204ENST00000506443 KIAA1551Q9HCM1 1747 aa12.91□□□□□ -0.34
COPS4-204ENST00000506443 EVC2Q86UK5 1308 aa12.9□□□□□ -0.34
COPS4-204ENST00000506443 FBLN1P23142 703 aa12.9□□□□□ -0.34
COPS4-204ENST00000506443 PRIM1P49642 420 aaKnown RBP12.9□□□□□ -0.34
COPS4-204ENST00000506443 HSPA6P17066 643 aa12.89□□□□□ -0.35
COPS4-204ENST00000506443 ANKRD36BQ8N2N9 1353 aa12.89□□□□□ -0.35
COPS4-204ENST00000506443 UBR3Q6ZT12 1888 aa12.89□□□□□ -0.35
COPS4-204ENST00000506443 SLC16A10Q8TF71 515 aa12.88□□□□□ -0.35
COPS4-204ENST00000506443 L3MBTL2Q969R5 705 aa12.88□□□□□ -0.35
COPS4-204ENST00000506443 GPBP1L1Q9HC44 474 aaPredicted RBP12.88□□□□□ -0.35
COPS4-204ENST00000506443 CCNL1Q9UK58 526 aaPredicted RBP12.88□□□□□ -0.35
COPS4-204ENST00000506443 C4BP0C0L5 1744 aa12.88□□□□□ -0.35
COPS4-204ENST00000506443 SLC27A3Q5K4L6 730 aa12.87□□□□□ -0.35
COPS4-204ENST00000506443 A0A1W2PP64 1363 aa12.86□□□□□ -0.35
COPS4-204ENST00000506443 KIF3CO14782 793 aa12.86□□□□□ -0.35
COPS4-204ENST00000506443 USHBP1Q8N6Y0 703 aa12.86□□□□□ -0.35
COPS4-204ENST00000506443 CICQ96RK0 1608 aaPredicted RBP12.86□□□□□ -0.35
COPS4-204ENST00000506443 ITGB4P16144 1822 aa12.85□□□□□ -0.35
COPS4-204ENST00000506443 WDR90Q96KV7 1748 aa12.85□□□□□ -0.35
COPS4-204ENST00000506443 N4BP2Q86UW6 1770 aaPredicted RBP12.85□□□□□ -0.35
COPS4-204ENST00000506443 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
COPS4-204ENST00000506443 ROCK2O75116 1388 aaKnown RBP12.84□□□□□ -0.35
COPS4-204ENST00000506443 HTRA3P83110 453 aa12.84□□□□□ -0.35
COPS4-204ENST00000506443 IGSF1Q8N6C5 1336 aa12.84□□□□□ -0.35
COPS4-204ENST00000506443 GRIN3BO60391 1043 aa12.83□□□□□ -0.36
COPS4-204ENST00000506443 MAP2P11137 1827 aaKnown RBP12.83□□□□□ -0.36
COPS4-204ENST00000506443 EDC4Q6P2E9 1401 aaKnown RBP12.82□□□□□ -0.36
COPS4-204ENST00000506443 SIN3AQ96ST3 1273 aa12.82□□□□□ -0.36
COPS4-204ENST00000506443 SLC12A5Q9H2X9 1139 aa12.82□□□□□ -0.36
COPS4-204ENST00000506443 MAP3K19Q56UN5 1328 aa12.82□□□□□ -0.36
COPS4-204ENST00000506443 PHF14O94880 888 aa12.81□□□□□ -0.36
COPS4-204ENST00000506443 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
COPS4-204ENST00000506443 USP47Q96K76 1375 aa12.81□□□□□ -0.36
COPS4-204ENST00000506443 TMC1Q8TDI8 760 aa12.8□□□□□ -0.36
COPS4-204ENST00000506443 IP6K1Q92551 441 aa12.8□□□□□ -0.36
COPS4-204ENST00000506443 PXDNLA1KZ92 1463 aa12.79□□□□□ -0.36
COPS4-204ENST00000506443 HOXC9P31274 260 aa12.79□□□□□ -0.36
COPS4-204ENST00000506443 ZBTB12Q9Y330 459 aaPredicted RBP12.79□□□□□ -0.36
COPS4-204ENST00000506443 PKD1L3Q7Z443 1732 aa12.79□□□□□ -0.36
COPS4-204ENST00000506443 KIF13BQ9NQT8 1826 aa12.78□□□□□ -0.36
COPS4-204ENST00000506443 BRCA1P38398 1863 aaKnown RBP12.78□□□□□ -0.36
COPS4-204ENST00000506443 NMRK2Q9NPI5 230 aa12.78□□□□□ -0.36
COPS4-204ENST00000506443 CD2APQ9Y5K6 639 aa12.78□□□□□ -0.36
COPS4-204ENST00000506443 RRS1Q15050 365 aaKnown RBP12.77□□□□□ -0.37
COPS4-204ENST00000506443 COL13A1Q5TAT6 717 aaPredicted RBP12.77□□□□□ -0.37
COPS4-204ENST00000506443 NBPF6Q5VWK0 638 aa12.77□□□□□ -0.37
COPS4-204ENST00000506443 DNAJC5GQ8N7S2 189 aa12.77□□□□□ -0.37
COPS4-204ENST00000506443 ZCRB1Q8TBF4 217 aaKnown RBP12.77□□□□□ -0.37
COPS4-204ENST00000506443 NBPF4Q96M43 638 aa12.77□□□□□ -0.37
COPS4-204ENST00000506443 ZBTB22O15209 634 aa12.75□□□□□ -0.37
COPS4-204ENST00000506443 LINC00116Q8NCU8 138 aa12.75□□□□□ -0.37
COPS4-204ENST00000506443 KIF20BQ96Q89 1820 aa12.74□□□□□ -0.37
COPS4-204ENST00000506443 C4AP0C0L4 1744 aa12.74□□□□□ -0.37
COPS4-204ENST00000506443 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.74□□□□□ -0.37
COPS4-204ENST00000506443 CYP27B1O15528 508 aa12.73□□□□□ -0.37
COPS4-204ENST00000506443 NEUROD1Q13562 356 aa12.73□□□□□ -0.37
COPS4-204ENST00000506443 MPRIPQ6WCQ1 1025 aa12.73□□□□□ -0.37
COPS4-204ENST00000506443 AMPHP49418 695 aa12.72□□□□□ -0.37
COPS4-204ENST00000506443 HDGFL2Q7Z4V5 671 aaPredicted RBP12.72□□□□□ -0.37
COPS4-204ENST00000506443 AK7Q96M32 723 aa12.72□□□□□ -0.37
COPS4-204ENST00000506443 KCPQ6ZWJ8 1503 aa12.72□□□□□ -0.37
COPS4-204ENST00000506443 C10orf71Q711Q0 1435 aa12.71□□□□□ -0.37
COPS4-204ENST00000506443 ITPK1Q13572 414 aa12.71□□□□□ -0.37
COPS4-204ENST00000506443 COL5A3P25940 1745 aaPredicted RBP12.71□□□□□ -0.38
COPS4-204ENST00000506443 RTL1A6NKG5 1358 aa12.7□□□□□ -0.38
COPS4-204ENST00000506443 APLP1P51693 650 aa12.7□□□□□ -0.38
COPS4-204ENST00000506443 PUS7Q96PZ0 661 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms