RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 FANCIQ9NVI1 1328 aa23.18■■□□□ 1.3
ITGA3-207ENST00000506401 COL14A1Q05707 1796 aaKnown RBP23.18■■□□□ 1.3
ITGA3-207ENST00000506401 TOM1L2Q6ZVM7 507 aa23.17■■□□□ 1.3
ITGA3-207ENST00000506401 TATP17735 454 aaPredicted RBP23.17■■□□□ 1.3
ITGA3-207ENST00000506401 FKBP8Q14318 412 aa23.17■■□□□ 1.3
ITGA3-207ENST00000506401 MCM10Q7L590 875 aa23.17■■□□□ 1.3
ITGA3-207ENST00000506401 TSR2Q969E8 191 aaKnown RBP23.17■■□□□ 1.3
ITGA3-207ENST00000506401 MAP3K5Q99683 1374 aa23.17■■□□□ 1.3
ITGA3-207ENST00000506401 CFAP44Q96MT7 982 aa23.16■■□□□ 1.3
ITGA3-207ENST00000506401 STRN4Q9NRL3 753 aa23.15■■□□□ 1.3
ITGA3-207ENST00000506401 ZNF853P0CG23 659 aa23.15■■□□□ 1.3
ITGA3-207ENST00000506401 ZNF530Q6P9A1 599 aaPredicted RBP23.15■■□□□ 1.3
ITGA3-207ENST00000506401 BTG4Q9NY30 223 aa23.15■■□□□ 1.3
ITGA3-207ENST00000506401 PLEKHG2Q9H7P9 1386 aa23.14■■□□□ 1.29
ITGA3-207ENST00000506401 CT47B1P0C2W7 299 aaPredicted RBP23.14■■□□□ 1.29
ITGA3-207ENST00000506401 CARD10Q9BWT7 1032 aa23.14■■□□□ 1.29
ITGA3-207ENST00000506401 AKAP4Q5JQC9 854 aa23.13■■□□□ 1.29
ITGA3-207ENST00000506401 JCADQ9P266 1359 aa23.13■■□□□ 1.29
ITGA3-207ENST00000506401 NUTM2BA6NNL0 878 aaPredicted RBP23.12■■□□□ 1.29
ITGA3-207ENST00000506401 NUTM2EB1AL46 878 aaPredicted RBP23.12■■□□□ 1.29
ITGA3-207ENST00000506401 C1orf141Q5JVX7 400 aa23.12■■□□□ 1.29
ITGA3-207ENST00000506401 NUTM2AQ8IVF1 878 aaPredicted RBP23.12■■□□□ 1.29
ITGA3-207ENST00000506401 ADAMTS2O95450 1211 aa23.12■■□□□ 1.29
ITGA3-207ENST00000506401 RRP1P56182 461 aaKnown RBP23.12■■□□□ 1.29
ITGA3-207ENST00000506401 EXOSC9Q06265 439 aaKnown RBP23.12■■□□□ 1.29
ITGA3-207ENST00000506401 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.12■■□□□ 1.29
ITGA3-207ENST00000506401 SPG7Q9UQ90 795 aa23.12■■□□□ 1.29
ITGA3-207ENST00000506401 LARP1Q6PKG0 1096 aaKnown RBP23.11■■□□□ 1.29
ITGA3-207ENST00000506401 CRB1P82279 1406 aa23.1■■□□□ 1.29
ITGA3-207ENST00000506401 MBIPQ9NS73 344 aa23.1■■□□□ 1.29
ITGA3-207ENST00000506401 CHL1O00533 1208 aa23.09■■□□□ 1.29
ITGA3-207ENST00000506401 IL17REQ8NFR9 667 aa23.09■■□□□ 1.29
ITGA3-207ENST00000506401 IRX6P78412 446 aaPredicted RBP23.08■■□□□ 1.29
ITGA3-207ENST00000506401 MEGF6O75095 1541 aa23.08■■□□□ 1.28
ITGA3-207ENST00000506401 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.08■■□□□ 1.28
ITGA3-207ENST00000506401 PARP4Q9UKK3 1724 aaKnown RBP23.06■■□□□ 1.28
ITGA3-207ENST00000506401 LRRC37A3O60309 1634 aa23.06■■□□□ 1.28
ITGA3-207ENST00000506401 RARSP54136 660 aaKnown RBP23.05■■□□□ 1.28
ITGA3-207ENST00000506401 PLCH1Q4KWH8 1693 aa23.05■■□□□ 1.28
ITGA3-207ENST00000506401 IL2RBP14784 551 aa23.05■■□□□ 1.28
ITGA3-207ENST00000506401 ERICH6BQ5W0A0 696 aa23.05■■□□□ 1.28
ITGA3-207ENST00000506401 TAF7Q15545 349 aaPredicted RBP23.04■■□□□ 1.28
ITGA3-207ENST00000506401 BABAM1Q9NWV8 329 aa23.04■■□□□ 1.28
ITGA3-207ENST00000506401 SPATA31A6Q5VVP1 1343 aa23.04■■□□□ 1.28
ITGA3-207ENST00000506401 CEMIPQ8WUJ3 1361 aa23.04■■□□□ 1.28
ITGA3-207ENST00000506401 PKD1L3Q7Z443 1732 aa23.04■■□□□ 1.28
ITGA3-207ENST00000506401 OVOS2A0A0G2JMS6 1433 aa23.03■■□□□ 1.28
ITGA3-207ENST00000506401 MPRIPQ6WCQ1 1025 aa23.03■■□□□ 1.28
ITGA3-207ENST00000506401 IFNL2Q8IZJ0 200 aa23.03■■□□□ 1.28
ITGA3-207ENST00000506401 LGR6Q9HBX8 967 aa23.03■■□□□ 1.28
ITGA3-207ENST00000506401 TSPYL4Q9UJ04 414 aa23.03■■□□□ 1.28
ITGA3-207ENST00000506401 VIRMAQ69YN4 1812 aaKnown RBP23.03■■□□□ 1.28
ITGA3-207ENST00000506401 RNMTO43148 476 aaKnown RBP23.03■■□□□ 1.28
ITGA3-207ENST00000506401 BCAR3O75815 825 aa23.03■■□□□ 1.28
ITGA3-207ENST00000506401 HSPA1LP34931 641 aa23.03■■□□□ 1.28
ITGA3-207ENST00000506401 ZNF428Q96B54 188 aa23.03■■□□□ 1.28
ITGA3-207ENST00000506401 ZCRB1Q8TBF4 217 aaKnown RBP23.02■■□□□ 1.28
ITGA3-207ENST00000506401 PLIN1O60240 522 aa23.01■■□□□ 1.27
ITGA3-207ENST00000506401 PHKG2P15735 406 aa23.01■■□□□ 1.27
ITGA3-207ENST00000506401 TEFQ10587 303 aa23.01■■□□□ 1.27
ITGA3-207ENST00000506401 USP35Q9P2H5 1018 aa23.01■■□□□ 1.27
ITGA3-207ENST00000506401 MIS18AQ9NYP9 233 aa23.01■■□□□ 1.27
ITGA3-207ENST00000506401 NWD2Q9ULI1 1742 aa23■■□□□ 1.27
ITGA3-207ENST00000506401 HSP90AB1P08238 724 aaKnown RBP23■■□□□ 1.27
ITGA3-207ENST00000506401 VAMP4O75379 141 aa22.98■■□□□ 1.27
ITGA3-207ENST00000506401 TWISTNBQ3B726 338 aaPredicted RBP22.98■■□□□ 1.27
ITGA3-207ENST00000506401 C8orf58Q8NAV2 365 aa22.98■■□□□ 1.27
ITGA3-207ENST00000506401 NRAPQ86VF7 1730 aa22.98■■□□□ 1.27
ITGA3-207ENST00000506401 PCDH11XQ9BZA7 1347 aa22.98■■□□□ 1.27
ITGA3-207ENST00000506401 PCDH11YQ9BZA8 1340 aa22.98■■□□□ 1.27
ITGA3-207ENST00000506401 ALDH1L2Q3SY69 923 aa22.98■■□□□ 1.27
ITGA3-207ENST00000506401 CYP27B1O15528 508 aa22.97■■□□□ 1.27
ITGA3-207ENST00000506401 TSPYL6Q8N831 410 aa22.97■■□□□ 1.27
ITGA3-207ENST00000506401 SLIT2O94813 1529 aa22.97■■□□□ 1.27
ITGA3-207ENST00000506401 ELL2O00472 640 aaPredicted RBP22.96■■□□□ 1.27
ITGA3-207ENST00000506401 CANXP27824 592 aaKnown RBP22.96■■□□□ 1.27
ITGA3-207ENST00000506401 NGLY1Q96IV0 654 aa22.96■■□□□ 1.27
ITGA3-207ENST00000506401 SMC4Q9NTJ3 1288 aa22.96■■□□□ 1.27
ITGA3-207ENST00000506401 SCN11AQ9UI33 1791 aa22.96■■□□□ 1.27
ITGA3-207ENST00000506401 ADAMTS7Q9UKP4 1686 aa22.96■■□□□ 1.27
ITGA3-207ENST00000506401 DCAF5Q96JK2 942 aa22.96■■□□□ 1.27
ITGA3-207ENST00000506401 SSH1Q8WYL5 1049 aa22.95■■□□□ 1.26
ITGA3-207ENST00000506401 C8orf37Q96NL8 207 aa22.95■■□□□ 1.26
ITGA3-207ENST00000506401 BCL2L13Q9BXK5 485 aa22.95■■□□□ 1.26
ITGA3-207ENST00000506401 THRAP3Q9Y2W1 955 aaKnown RBP22.94■■□□□ 1.26
ITGA3-207ENST00000506401 BTBD11A6QL63 1104 aa22.94■■□□□ 1.26
ITGA3-207ENST00000506401 FRAT1Q92837 279 aaPredicted RBP22.94■■□□□ 1.26
ITGA3-207ENST00000506401 UNC5CLQ8IV45 518 aa22.93■■□□□ 1.26
ITGA3-207ENST00000506401 SPATA31A1Q5TZJ5 1347 aa22.92■■□□□ 1.26
ITGA3-207ENST00000506401 CDCA7Q9BWT1 371 aaPredicted RBP22.92■■□□□ 1.26
ITGA3-207ENST00000506401 DISP2A7MBM2 1401 aa22.91■■□□□ 1.26
ITGA3-207ENST00000506401 KDM6AO15550 1401 aaPredicted RBP22.91■■□□□ 1.26
ITGA3-207ENST00000506401 SIPA1L3O60292 1781 aaPredicted RBP22.91■■□□□ 1.26
ITGA3-207ENST00000506401 KRT24Q2M2I5 525 aa22.91■■□□□ 1.26
ITGA3-207ENST00000506401 DDX54Q8TDD1 881 aaKnown RBP22.91■■□□□ 1.26
ITGA3-207ENST00000506401 SLC52A2Q9HAB3 445 aa22.91■■□□□ 1.26
ITGA3-207ENST00000506401 CCDC9Q9Y3X0 531 aaKnown RBP22.91■■□□□ 1.26
ITGA3-207ENST00000506401 BRPF1P55201 1214 aaPredicted RBP22.9■■□□□ 1.26
ITGA3-207ENST00000506401 PDE3AQ14432 1141 aa22.9■■□□□ 1.26
ITGA3-207ENST00000506401 MEX3CQ5U5Q3 659 aaKnown RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms