RNA–Protein interactions for RNA: ENST00000506312.3

RACK1-213, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-213ENST00000506312 RGPD5Q99666 1765 aa11.83□□□□□ -0.52
RACK1-213ENST00000506312 DDX54Q8TDD1 881 aaKnown RBP11.83□□□□□ -0.52
RACK1-213ENST00000506312 CFAP44Q96MT7 982 aa11.83□□□□□ -0.52
RACK1-213ENST00000506312 NLRP2Q9NX02 1062 aa11.83□□□□□ -0.52
RACK1-213ENST00000506312 PRDM10Q9NQV6 1147 aa11.82□□□□□ -0.52
RACK1-213ENST00000506312 ADGRB1O14514 1584 aa11.82□□□□□ -0.52
RACK1-213ENST00000506312 KIAA1210Q9ULL0 1709 aa11.82□□□□□ -0.52
RACK1-213ENST00000506312 SLIT3O75094 1523 aa11.81□□□□□ -0.52
RACK1-213ENST00000506312 PHF14O94880 888 aa11.81□□□□□ -0.52
RACK1-213ENST00000506312 IL2RBP14784 551 aa11.81□□□□□ -0.52
RACK1-213ENST00000506312 PRIM1P49642 420 aaKnown RBP11.81□□□□□ -0.52
RACK1-213ENST00000506312 AIDAQ96BJ3 306 aa11.81□□□□□ -0.52
RACK1-213ENST00000506312 CCDC61Q9Y6R9 512 aa11.81□□□□□ -0.52
RACK1-213ENST00000506312 PLEKHG3A1L390 1219 aa11.8□□□□□ -0.52
RACK1-213ENST00000506312 LBX1P52954 281 aa11.8□□□□□ -0.52
RACK1-213ENST00000506312 PLEKHG2Q9H7P9 1386 aa11.79□□□□□ -0.52
RACK1-213ENST00000506312 CTCFP49711 727 aaPredicted RBP11.79□□□□□ -0.52
RACK1-213ENST00000506312 ARHGEF25Q86VW2 580 aa11.79□□□□□ -0.52
RACK1-213ENST00000506312 RNF181Q9P0P0 153 aa11.79□□□□□ -0.52
RACK1-213ENST00000506312 PXDNLA1KZ92 1463 aa11.78□□□□□ -0.52
RACK1-213ENST00000506312 A0A0G2JLW4 131 aa11.78□□□□□ -0.52
RACK1-213ENST00000506312 FCHSD2O94868 740 aa11.78□□□□□ -0.52
RACK1-213ENST00000506312 ERBB3P21860 1342 aa11.78□□□□□ -0.52
RACK1-213ENST00000506312 LY75O60449 1722 aa11.77□□□□□ -0.53
RACK1-213ENST00000506312 TNRC6CQ9HCJ0 1690 aaKnown RBP11.76□□□□□ -0.53
RACK1-213ENST00000506312 AMIGO3Q86WK7 504 aa11.76□□□□□ -0.53
RACK1-213ENST00000506312 PKD1L3Q7Z443 1732 aa11.76□□□□□ -0.53
RACK1-213ENST00000506312 C10orf71Q711Q0 1435 aa11.76□□□□□ -0.53
RACK1-213ENST00000506312 DOT1LQ8TEK3 1739 aa11.75□□□□□ -0.53
RACK1-213ENST00000506312 N4BP2Q86UW6 1770 aaPredicted RBP11.75□□□□□ -0.53
RACK1-213ENST00000506312 SRPK2P78362 688 aaKnown RBP11.75□□□□□ -0.53
RACK1-213ENST00000506312 PPARGC1BQ86YN6 1023 aaKnown RBP11.75□□□□□ -0.53
RACK1-213ENST00000506312 FLAD1Q8NFF5 587 aa11.75□□□□□ -0.53
RACK1-213ENST00000506312 NSD2O96028 1365 aa11.75□□□□□ -0.53
RACK1-213ENST00000506312 USP47Q96K76 1375 aa11.75□□□□□ -0.53
RACK1-213ENST00000506312 AK7Q96M32 723 aa11.74□□□□□ -0.53
RACK1-213ENST00000506312 KDM2AQ9Y2K7 1162 aa11.74□□□□□ -0.53
RACK1-213ENST00000506312 ANKRD36BQ8N2N9 1353 aa11.74□□□□□ -0.53
RACK1-213ENST00000506312 C5P01031 1676 aa11.74□□□□□ -0.53
RACK1-213ENST00000506312 USP54Q70EL1 1684 aa11.73□□□□□ -0.53
RACK1-213ENST00000506312 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.72□□□□□ -0.53
RACK1-213ENST00000506312 DPEP1P16444 411 aa11.72□□□□□ -0.53
RACK1-213ENST00000506312 RGS19P49795 217 aa11.72□□□□□ -0.53
RACK1-213ENST00000506312 KCNH5Q8NCM2 988 aa11.72□□□□□ -0.53
RACK1-213ENST00000506312 CABP2Q9NPB3 220 aa11.72□□□□□ -0.53
RACK1-213ENST00000506312 PDE4DIPQ5VU43 2346 aa11.72□□□□□ -0.53
RACK1-213ENST00000506312 MMP10P09238 476 aa11.71□□□□□ -0.53
RACK1-213ENST00000506312 HSPA8P11142 646 aaKnown RBP11.7□□□□□ -0.54
RACK1-213ENST00000506312 VEGFAP15692 232 aaPredicted RBP11.7□□□□□ -0.54
RACK1-213ENST00000506312 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
RACK1-213ENST00000506312 CABP1Q9NZU7 370 aa11.7□□□□□ -0.54
RACK1-213ENST00000506312 KIAA1551Q9HCM1 1747 aa11.69□□□□□ -0.54
RACK1-213ENST00000506312 QRICH2Q9H0J4 1663 aa11.69□□□□□ -0.54
RACK1-213ENST00000506312 ANKRD24Q8TF21 1146 aa11.69□□□□□ -0.54
RACK1-213ENST00000506312 TOGARAM1Q9Y4F4 1720 aa11.69□□□□□ -0.54
RACK1-213ENST00000506312 CNTNAP1P78357 1384 aa11.68□□□□□ -0.54
RACK1-213ENST00000506312 VEGFBP49765 207 aa11.68□□□□□ -0.54
RACK1-213ENST00000506312 TGFB2P61812 414 aa11.68□□□□□ -0.54
RACK1-213ENST00000506312 NFAT5O94916 1531 aa11.68□□□□□ -0.54
RACK1-213ENST00000506312 RASSF7Q02833 373 aa11.67□□□□□ -0.54
RACK1-213ENST00000506312 LTV1Q96GA3 475 aaPredicted RBP11.67□□□□□ -0.54
RACK1-213ENST00000506312 MPHOSPH9Q99550 1183 aa11.67□□□□□ -0.54
RACK1-213ENST00000506312 WBP1LQ9NX94 342 aa11.67□□□□□ -0.54
RACK1-213ENST00000506312 PALLDQ8WX93 1383 aa11.67□□□□□ -0.54
RACK1-213ENST00000506312 C4BP0C0L5 1744 aa11.66□□□□□ -0.54
RACK1-213ENST00000506312 DCAF11Q8TEB1 546 aa11.65□□□□□ -0.54
RACK1-213ENST00000506312 TNRC18O15417 2968 aaPredicted RBP11.65□□□□□ -0.54
RACK1-213ENST00000506312 TTC21BQ7Z4L5 1316 aa11.64□□□□□ -0.55
RACK1-213ENST00000506312 DALRD3Q5D0E6 543 aaKnown RBP11.64□□□□□ -0.55
RACK1-213ENST00000506312 TAF1LQ8IZX4 1826 aa11.63□□□□□ -0.55
RACK1-213ENST00000506312 GLTPD2A6NH11 291 aa11.63□□□□□ -0.55
RACK1-213ENST00000506312 GNPATO15228 680 aa11.63□□□□□ -0.55
RACK1-213ENST00000506312 POTEIP0CG38 1075 aa11.63□□□□□ -0.55
RACK1-213ENST00000506312 POTEJP0CG39 1038 aa11.63□□□□□ -0.55
RACK1-213ENST00000506312 DCAF5Q96JK2 942 aa11.63□□□□□ -0.55
RACK1-213ENST00000506312 CCDC87Q9NVE4 849 aa11.63□□□□□ -0.55
RACK1-213ENST00000506312 PIM2Q9P1W9 311 aa11.63□□□□□ -0.55
RACK1-213ENST00000506312 KIF13BQ9NQT8 1826 aa11.63□□□□□ -0.55
RACK1-213ENST00000506312 NSD3Q9BZ95 1437 aa11.62□□□□□ -0.55
RACK1-213ENST00000506312 UBR3Q6ZT12 1888 aa11.62□□□□□ -0.55
RACK1-213ENST00000506312 SSFA2P28290 1259 aa11.62□□□□□ -0.55
RACK1-213ENST00000506312 CHADLQ6NUI6 762 aa11.62□□□□□ -0.55
RACK1-213ENST00000506312 MPRIPQ6WCQ1 1025 aa11.62□□□□□ -0.55
RACK1-213ENST00000506312 TSKSQ9UJT2 592 aa11.62□□□□□ -0.55
RACK1-213ENST00000506312 KCNA3P22001 575 aa11.61□□□□□ -0.55
RACK1-213ENST00000506312 ZCRB1Q8TBF4 217 aaKnown RBP11.61□□□□□ -0.55
RACK1-213ENST00000506312 ARFGEF1Q9Y6D6 1849 aa11.6□□□□□ -0.55
RACK1-213ENST00000506312 BRCA1P38398 1863 aaKnown RBP11.6□□□□□ -0.55
RACK1-213ENST00000506312 CHRNA5P30532 468 aa11.6□□□□□ -0.55
RACK1-213ENST00000506312 LINC00116Q8NCU8 138 aa11.6□□□□□ -0.55
RACK1-213ENST00000506312 POTECB2RU33 542 aa11.59□□□□□ -0.55
RACK1-213ENST00000506312 GRM1Q13255 1194 aa11.59□□□□□ -0.55
RACK1-213ENST00000506312 PRPF38BQ5VTL8 546 aaKnown RBP11.59□□□□□ -0.55
RACK1-213ENST00000506312 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.59□□□□□ -0.55
RACK1-213ENST00000506312 MCOLN1Q9GZU1 580 aa11.59□□□□□ -0.55
RACK1-213ENST00000506312 LTN1O94822 1766 aa11.59□□□□□ -0.55
RACK1-213ENST00000506312 SBF1O95248 1867 aa11.58□□□□□ -0.56
RACK1-213ENST00000506312 SOX10P56693 466 aa11.58□□□□□ -0.56
RACK1-213ENST00000506312 PARP3Q9Y6F1 533 aa11.58□□□□□ -0.56
RACK1-213ENST00000506312 MEGF6O75095 1541 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms