RNA–Protein interactions for RNA: ENST00000506303.1

TROVE2-211, Transcript of TROVE domain family member 2, humanhuman

TSL 3

Gene TROVE2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2-211ENST00000506303 MAP3K19Q56UN5 1328 aa15.16■□□□□ 0.02
TROVE2-211ENST00000506303 CEP350Q5VT06 3117 aa15.15■□□□□ 0.02
TROVE2-211ENST00000506303 TONSLQ96HA7 1378 aa15.15■□□□□ 0.02
TROVE2-211ENST00000506303 LTV1Q96GA3 475 aaPredicted RBP15.15■□□□□ 0.02
TROVE2-211ENST00000506303 LY75O60449 1722 aa15.14■□□□□ 0.01
TROVE2-211ENST00000506303 SHANK3Q9BYB0 1731 aa15.14■□□□□ 0.01
TROVE2-211ENST00000506303 ST20-MTHFSA0A0A6YYL1 179 aa15.14■□□□□ 0.01
TROVE2-211ENST00000506303 HOXC9P31274 260 aa15.14■□□□□ 0.01
TROVE2-211ENST00000506303 ZNF784Q8NCA9 323 aaPredicted RBP15.14■□□□□ 0.01
TROVE2-211ENST00000506303 DDX54Q8TDD1 881 aaKnown RBP15.14■□□□□ 0.01
TROVE2-211ENST00000506303 COG3Q96JB2 828 aa15.14■□□□□ 0.01
TROVE2-211ENST00000506303 TUBGCP6Q96RT7 1819 aa15.14■□□□□ 0.01
TROVE2-211ENST00000506303 ANKRD36BQ8N2N9 1353 aa15.13■□□□□ 0.01
TROVE2-211ENST00000506303 PRIM1P49642 420 aaKnown RBP15.12■□□□□ 0.01
TROVE2-211ENST00000506303 PNPLA7Q6ZV29 1317 aa15.12■□□□□ 0.01
TROVE2-211ENST00000506303 DOT1LQ8TEK3 1739 aa15.12■□□□□ 0.01
TROVE2-211ENST00000506303 RTL1A6NKG5 1358 aa15.11■□□□□ 0.01
TROVE2-211ENST00000506303 NSD2O96028 1365 aa15.11■□□□□ 0.01
TROVE2-211ENST00000506303 FBLN1P23142 703 aa15.11■□□□□ 0.01
TROVE2-211ENST00000506303 AMPHP49418 695 aa15.11■□□□□ 0.01
TROVE2-211ENST00000506303 ZCRB1Q8TBF4 217 aaKnown RBP15.11■□□□□ 0.01
TROVE2-211ENST00000506303 CGNL1Q0VF96 1302 aa15.1■□□□□ 0.01
TROVE2-211ENST00000506303 MEGF6O75095 1541 aa15.09■□□□□ 0.01
TROVE2-211ENST00000506303 FYB1O15117 783 aa15.09■□□□□ 0.01
TROVE2-211ENST00000506303 SYTL4Q96C24 671 aaPredicted RBP15.09■□□□□ 0.01
TROVE2-211ENST00000506303 NBPF6Q5VWK0 638 aa15.08■□□□□ 0
TROVE2-211ENST00000506303 KLHL34Q8N239 644 aa15.08■□□□□ 0
TROVE2-211ENST00000506303 NBPF4Q96M43 638 aa15.08■□□□□ 0
TROVE2-211ENST00000506303 TFCP2L1Q9NZI6 479 aa15.08■□□□□ 0
TROVE2-211ENST00000506303 POLD1P28340 1107 aa15.07■□□□□ 0
TROVE2-211ENST00000506303 KCNQ4P56696 695 aa15.07■□□□□ 0
TROVE2-211ENST00000506303 RRS1Q15050 365 aaKnown RBP15.06■□□□□ 0
TROVE2-211ENST00000506303 INSRP06213 1382 aa15.05■□□□□ -0
TROVE2-211ENST00000506303 KIF24Q5T7B8 1368 aa15.05■□□□□ -0
TROVE2-211ENST00000506303 TAF1LQ8IZX4 1826 aa15.04■□□□□ -0
TROVE2-211ENST00000506303 GPR162Q16538 588 aa15.04■□□□□ -0
TROVE2-211ENST00000506303 GGNBP2Q9H3C7 697 aa15.04■□□□□ -0
TROVE2-211ENST00000506303 CCNL1Q9UK58 526 aaPredicted RBP15.04■□□□□ -0
TROVE2-211ENST00000506303 USP47Q96K76 1375 aa15.03■□□□□ -0
TROVE2-211ENST00000506303 TMF1P82094 1093 aa15.03■□□□□ -0
TROVE2-211ENST00000506303 PELP1Q8IZL8 1130 aaKnown RBP15.03■□□□□ -0
TROVE2-211ENST00000506303 RAPGEF4Q8WZA2 1011 aa15.03■□□□□ -0
TROVE2-211ENST00000506303 KIF20BQ96Q89 1820 aa15.03■□□□□ -0
TROVE2-211ENST00000506303 SMG6Q86US8 1419 aaKnown RBP15.02■□□□□ -0
TROVE2-211ENST00000506303 TATP17735 454 aaPredicted RBP15.02■□□□□ -0
TROVE2-211ENST00000506303 HMGB2P26583 209 aaKnown RBP15.02■□□□□ -0
TROVE2-211ENST00000506303 COL23A1Q86Y22 540 aaPredicted RBP15.02■□□□□ -0
TROVE2-211ENST00000506303 USHBP1Q8N6Y0 703 aa15.02■□□□□ -0
TROVE2-211ENST00000506303 ITGB4P16144 1822 aa15.01□□□□□ -0.01
TROVE2-211ENST00000506303 FLT4P35916 1363 aa15.01□□□□□ -0.01
TROVE2-211ENST00000506303 C5P01031 1676 aa15.01□□□□□ -0.01
TROVE2-211ENST00000506303 C1QTNF8P60827 252 aa15.01□□□□□ -0.01
TROVE2-211ENST00000506303 HSP90AB2PQ58FF8 381 aa15.01□□□□□ -0.01
TROVE2-211ENST00000506303 NLGN2Q8NFZ4 835 aa15.01□□□□□ -0.01
TROVE2-211ENST00000506303 PCDH11XQ9BZA7 1347 aa15□□□□□ -0.01
TROVE2-211ENST00000506303 PCDH11YQ9BZA8 1340 aa15□□□□□ -0.01
TROVE2-211ENST00000506303 CDCA8Q53HL2 280 aa15□□□□□ -0.01
TROVE2-211ENST00000506303 NCAPD2Q15021 1401 aa15□□□□□ -0.01
TROVE2-211ENST00000506303 CYP27B1O15528 508 aa14.99□□□□□ -0.01
TROVE2-211ENST00000506303 PKD1L3Q7Z443 1732 aa14.99□□□□□ -0.01
TROVE2-211ENST00000506303 FLAD1Q8NFF5 587 aa14.98□□□□□ -0.01
TROVE2-211ENST00000506303 CARD14Q9BXL6 1004 aa14.98□□□□□ -0.01
TROVE2-211ENST00000506303 TOGARAM1Q9Y4F4 1720 aa14.97□□□□□ -0.01
TROVE2-211ENST00000506303 MAP2P11137 1827 aaKnown RBP14.97□□□□□ -0.01
TROVE2-211ENST00000506303 GRIN3BO60391 1043 aa14.97□□□□□ -0.01
TROVE2-211ENST00000506303 NKX1-1Q15270 411 aaPredicted RBP14.97□□□□□ -0.01
TROVE2-211ENST00000506303 MIER1Q8N108 512 aa14.97□□□□□ -0.01
TROVE2-211ENST00000506303 ANKRD26Q9UPS8 1709 aa14.97□□□□□ -0.01
TROVE2-211ENST00000506303 UBR3Q6ZT12 1888 aa14.97□□□□□ -0.01
TROVE2-211ENST00000506303 PALLDQ8WX93 1383 aa14.97□□□□□ -0.01
TROVE2-211ENST00000506303 YBX3P16989 372 aaKnown RBP eCLIP14.96□□□□□ -0.01
TROVE2-211ENST00000506303 SMARCC1Q92922 1105 aaPredicted RBP14.96□□□□□ -0.01
TROVE2-211ENST00000506303 MPRIPQ6WCQ1 1025 aa14.95□□□□□ -0.02
TROVE2-211ENST00000506303 CD2APQ9Y5K6 639 aa14.95□□□□□ -0.02
TROVE2-211ENST00000506303 EMILIN1Q9Y6C2 1016 aa14.95□□□□□ -0.02
TROVE2-211ENST00000506303 C4BP0C0L5 1744 aa14.95□□□□□ -0.02
TROVE2-211ENST00000506303 SENP3-EIF4A1A0A087X0R7 540 aa14.94□□□□□ -0.02
TROVE2-211ENST00000506303 MSL1Q68DK7 614 aa14.94□□□□□ -0.02
TROVE2-211ENST00000506303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.94□□□□□ -0.02
TROVE2-211ENST00000506303 WASHC2AQ641Q2 1341 aa14.93□□□□□ -0.02
TROVE2-211ENST00000506303 PIGBQ92521 554 aa14.93□□□□□ -0.02
TROVE2-211ENST00000506303 NSD3Q9BZ95 1437 aa14.92□□□□□ -0.02
TROVE2-211ENST00000506303 GIGYF1O75420 1035 aaPredicted RBP14.92□□□□□ -0.02
TROVE2-211ENST00000506303 AMIGO3Q86WK7 504 aa14.91□□□□□ -0.02
TROVE2-211ENST00000506303 SPG7Q9UQ90 795 aa14.91□□□□□ -0.02
TROVE2-211ENST00000506303 AK7Q96M32 723 aa14.9□□□□□ -0.02
TROVE2-211ENST00000506303 EYA1Q99502 592 aa14.9□□□□□ -0.02
TROVE2-211ENST00000506303 PLEKHG2Q9H7P9 1386 aa14.89□□□□□ -0.03
TROVE2-211ENST00000506303 LOC102724428A0A0B4J2F2 783 aa14.89□□□□□ -0.03
TROVE2-211ENST00000506303 PPM1GO15355 546 aaPredicted RBP14.89□□□□□ -0.03
TROVE2-211ENST00000506303 SSFA2P28290 1259 aa14.89□□□□□ -0.03
TROVE2-211ENST00000506303 SIK1P57059 783 aa14.89□□□□□ -0.03
TROVE2-211ENST00000506303 POLKQ9UBT6 870 aa14.89□□□□□ -0.03
TROVE2-211ENST00000506303 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.88□□□□□ -0.03
TROVE2-211ENST00000506303 LINC00116Q8NCU8 138 aa14.87□□□□□ -0.03
TROVE2-211ENST00000506303 ADCY9O60503 1353 aa14.86□□□□□ -0.03
TROVE2-211ENST00000506303 PHF14O94880 888 aa14.86□□□□□ -0.03
TROVE2-211ENST00000506303 PHKG2P15735 406 aa14.86□□□□□ -0.03
TROVE2-211ENST00000506303 IFNL2Q8IZJ0 200 aa14.86□□□□□ -0.03
TROVE2-211ENST00000506303 TMOD3Q9NYL9 352 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms