RNA–Protein interactions for RNA: ENST00000506262.1

PDS5A-205, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 3

Gene PDS5A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-205ENST00000506262 ACSBG1Q96GR2 724 aa18.41■□□□□ 0.54
PDS5A-205ENST00000506262 POLKQ9UBT6 870 aa18.41■□□□□ 0.54
PDS5A-205ENST00000506262 PSDA5PKW4 1024 aaPredicted RBP18.4■□□□□ 0.54
PDS5A-205ENST00000506262 CNGB1Q14028 1251 aaPredicted RBP18.4■□□□□ 0.54
PDS5A-205ENST00000506262 ZCRB1Q8TBF4 217 aaKnown RBP18.4■□□□□ 0.54
PDS5A-205ENST00000506262 CAMKK2Q96RR4 588 aa18.4■□□□□ 0.54
PDS5A-205ENST00000506262 PKD1L3Q7Z443 1732 aa18.38■□□□□ 0.53
PDS5A-205ENST00000506262 CC2D1BQ5T0F9 858 aaKnown RBP18.38■□□□□ 0.53
PDS5A-205ENST00000506262 NBPF14Q5TI25 921 aa18.38■□□□□ 0.53
PDS5A-205ENST00000506262 SYTL4Q96C24 671 aaPredicted RBP18.38■□□□□ 0.53
PDS5A-205ENST00000506262 PCDH11XQ9BZA7 1347 aa18.38■□□□□ 0.53
PDS5A-205ENST00000506262 PCDH11YQ9BZA8 1340 aa18.38■□□□□ 0.53
PDS5A-205ENST00000506262 R3HDM1Q15032 1099 aaKnown RBP18.36■□□□□ 0.53
PDS5A-205ENST00000506262 AMER1Q5JTC6 1135 aaPredicted RBP18.36■□□□□ 0.53
PDS5A-205ENST00000506262 PTF1AQ7RTS3 328 aa18.36■□□□□ 0.53
PDS5A-205ENST00000506262 KCNQ2O43526 872 aa18.35■□□□□ 0.53
PDS5A-205ENST00000506262 EIF4A2Q14240 407 aaKnown RBP18.35■□□□□ 0.53
PDS5A-205ENST00000506262 PLSCR1O15162 318 aa18.34■□□□□ 0.53
PDS5A-205ENST00000506262 EYA1Q99502 592 aa18.34■□□□□ 0.53
PDS5A-205ENST00000506262 SPG7Q9UQ90 795 aa18.33■□□□□ 0.52
PDS5A-205ENST00000506262 NCAPD2Q15021 1401 aa18.32■□□□□ 0.52
PDS5A-205ENST00000506262 ITGB4P16144 1822 aa18.3■□□□□ 0.52
PDS5A-205ENST00000506262 LRP5O75197 1615 aa18.3■□□□□ 0.52
PDS5A-205ENST00000506262 SRCAPQ6ZRS2 3230 aa18.3■□□□□ 0.52
PDS5A-205ENST00000506262 PER1O15534 1290 aaPredicted RBP18.29■□□□□ 0.52
PDS5A-205ENST00000506262 PRIM1P49642 420 aaKnown RBP18.29■□□□□ 0.52
PDS5A-205ENST00000506262 TXNRD1Q16881 649 aa18.29■□□□□ 0.52
PDS5A-205ENST00000506262 NPC1L1Q9UHC9 1359 aa18.29■□□□□ 0.52
PDS5A-205ENST00000506262 IGSF1Q8N6C5 1336 aa18.28■□□□□ 0.52
PDS5A-205ENST00000506262 TOGARAM1Q9Y4F4 1720 aa18.28■□□□□ 0.52
PDS5A-205ENST00000506262 MTHFSP49914 203 aa18.27■□□□□ 0.52
PDS5A-205ENST00000506262 STK32BQ9NY57 414 aa18.27■□□□□ 0.52
PDS5A-205ENST00000506262 LY75O60449 1722 aa18.26■□□□□ 0.51
PDS5A-205ENST00000506262 CYP27B1O15528 508 aa18.25■□□□□ 0.51
PDS5A-205ENST00000506262 SULT6B1Q6IMI4 303 aa18.24■□□□□ 0.51
PDS5A-205ENST00000506262 IFNL2Q8IZJ0 200 aa18.24■□□□□ 0.51
PDS5A-205ENST00000506262 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.24■□□□□ 0.51
PDS5A-205ENST00000506262 PLEKHG2Q9H7P9 1386 aa18.24■□□□□ 0.51
PDS5A-205ENST00000506262 PLEKHO1Q53GL0 409 aaPredicted RBP18.23■□□□□ 0.51
PDS5A-205ENST00000506262 MPRIPQ6WCQ1 1025 aa18.23■□□□□ 0.51
PDS5A-205ENST00000506262 DIAPH1O60610 1272 aaKnown RBP18.22■□□□□ 0.51
PDS5A-205ENST00000506262 AEBP1Q8IUX7 1158 aa18.22■□□□□ 0.51
PDS5A-205ENST00000506262 CFAP53Q96M91 514 aa18.22■□□□□ 0.51
PDS5A-205ENST00000506262 ANO8Q9HCE9 1232 aaPredicted RBP18.22■□□□□ 0.51
PDS5A-205ENST00000506262 PAPPAQ13219 1627 aa18.22■□□□□ 0.51
PDS5A-205ENST00000506262 IL13P35225 146 aa18.21■□□□□ 0.51
PDS5A-205ENST00000506262 AMOTQ4VCS5 1084 aa18.21■□□□□ 0.51
PDS5A-205ENST00000506262 C1orf141Q5JVX7 400 aa18.21■□□□□ 0.51
PDS5A-205ENST00000506262 SLC27A3Q5K4L6 730 aa18.21■□□□□ 0.51
PDS5A-205ENST00000506262 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
PDS5A-205ENST00000506262 PROM2Q8N271 834 aa18.21■□□□□ 0.51
PDS5A-205ENST00000506262 CASZ1Q86V15 1759 aa18.2■□□□□ 0.5
PDS5A-205ENST00000506262 C5P01031 1676 aa18.2■□□□□ 0.5
PDS5A-205ENST00000506262 PHKG2P15735 406 aa18.2■□□□□ 0.5
PDS5A-205ENST00000506262 TMOD3Q9NYL9 352 aa18.2■□□□□ 0.5
PDS5A-205ENST00000506262 CCNL1Q9UK58 526 aaPredicted RBP18.2■□□□□ 0.5
PDS5A-205ENST00000506262 VIRMAQ69YN4 1812 aaKnown RBP18.2■□□□□ 0.5
PDS5A-205ENST00000506262 U2SURPO15042 1029 aaKnown RBP18.19■□□□□ 0.5
PDS5A-205ENST00000506262 HSP90AB1P08238 724 aaKnown RBP18.19■□□□□ 0.5
PDS5A-205ENST00000506262 PALLDQ8WX93 1383 aa18.18■□□□□ 0.5
PDS5A-205ENST00000506262 HMOX1P09601 288 aa18.18■□□□□ 0.5
PDS5A-205ENST00000506262 ZEB1P37275 1124 aaPredicted RBP18.18■□□□□ 0.5
PDS5A-205ENST00000506262 SLC15A2Q16348 729 aa18.18■□□□□ 0.5
PDS5A-205ENST00000506262 TUBGCP6Q96RT7 1819 aa18.18■□□□□ 0.5
PDS5A-205ENST00000506262 KDRP35968 1356 aa18.17■□□□□ 0.5
PDS5A-205ENST00000506262 TAF1LQ8IZX4 1826 aa18.17■□□□□ 0.5
PDS5A-205ENST00000506262 SMARCC1Q92922 1105 aaPredicted RBP18.17■□□□□ 0.5
PDS5A-205ENST00000506262 PPP1R1BQ9UD71 204 aaPredicted RBP18.17■□□□□ 0.5
PDS5A-205ENST00000506262 QSER1Q2KHR3 1735 aa18.17■□□□□ 0.5
PDS5A-205ENST00000506262 NKX1-1Q15270 411 aaPredicted RBP18.16■□□□□ 0.5
PDS5A-205ENST00000506262 SPON1Q9HCB6 807 aa18.16■□□□□ 0.5
PDS5A-205ENST00000506262 COL3A1P02461 1466 aaPredicted RBP18.15■□□□□ 0.5
PDS5A-205ENST00000506262 SCN11AQ9UI33 1791 aa18.15■□□□□ 0.5
PDS5A-205ENST00000506262 KCNQ4P56696 695 aa18.15■□□□□ 0.5
PDS5A-205ENST00000506262 LRRC4BQ9NT99 713 aa18.15■□□□□ 0.5
PDS5A-205ENST00000506262 HMGB2P26583 209 aaKnown RBP18.14■□□□□ 0.49
PDS5A-205ENST00000506262 DCAF5Q96JK2 942 aa18.14■□□□□ 0.49
PDS5A-205ENST00000506262 TFCP2L1Q9NZI6 479 aa18.14■□□□□ 0.49
PDS5A-205ENST00000506262 PPP2R1AP30153 589 aa18.13■□□□□ 0.49
PDS5A-205ENST00000506262 PIGBQ92521 554 aa18.13■□□□□ 0.49
PDS5A-205ENST00000506262 NUDCQ9Y266 331 aa18.13■□□□□ 0.49
PDS5A-205ENST00000506262 ZBTB7AO95365 584 aa18.12■□□□□ 0.49
PDS5A-205ENST00000506262 ZNF827Q17R98 1081 aa18.12■□□□□ 0.49
PDS5A-205ENST00000506262 ERVV-2B6SEH9 535 aa18.11■□□□□ 0.49
PDS5A-205ENST00000506262 CABP4P57796 275 aa18.11■□□□□ 0.49
PDS5A-205ENST00000506262 KDM6AO15550 1401 aaPredicted RBP18.11■□□□□ 0.49
PDS5A-205ENST00000506262 C4BP0C0L5 1744 aa18.1■□□□□ 0.49
PDS5A-205ENST00000506262 MSH5O43196 834 aa18.1■□□□□ 0.49
PDS5A-205ENST00000506262 DDX10Q13206 875 aaKnown RBP18.1■□□□□ 0.49
PDS5A-205ENST00000506262 AKAP4Q5JQC9 854 aa18.09■□□□□ 0.49
PDS5A-205ENST00000506262 PDGFDQ9GZP0 370 aaPredicted RBP18.09■□□□□ 0.49
PDS5A-205ENST00000506262 AKT1S1Q96B36 256 aa18.08■□□□□ 0.48
PDS5A-205ENST00000506262 AK7Q96M32 723 aa18.08■□□□□ 0.48
PDS5A-205ENST00000506262 ATF5Q9Y2D1 282 aaPredicted RBP18.08■□□□□ 0.48
PDS5A-205ENST00000506262 U2AF1L5P0DN76 240 aaPredicted RBP18.07■□□□□ 0.48
PDS5A-205ENST00000506262 U2AF1Q01081 240 aaKnown RBP eCLIP18.07■□□□□ 0.48
PDS5A-205ENST00000506262 MTFR1LQ9H019 292 aa18.07■□□□□ 0.48
PDS5A-205ENST00000506262 ASAP1Q9ULH1 1129 aa18.07■□□□□ 0.48
PDS5A-205ENST00000506262 LOC102724428A0A0B4J2F2 783 aa18.06■□□□□ 0.48
PDS5A-205ENST00000506262 SIK1P57059 783 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms