RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 GRXCR2A6NFK2 248 aa8.01□□□□□ -1.13
SCLT1-207ENST00000506233 AMOTL2Q9Y2J4 779 aa8.01□□□□□ -1.13
SCLT1-207ENST00000506233 SHANK3Q9BYB0 1731 aa8.01□□□□□ -1.13
SCLT1-207ENST00000506233 CENPBP07199 599 aaPredicted RBP8.01□□□□□ -1.13
SCLT1-207ENST00000506233 PPP1R15BQ5SWA1 713 aa8.01□□□□□ -1.13
SCLT1-207ENST00000506233 IFNL1Q8IU54 200 aa8.01□□□□□ -1.13
SCLT1-207ENST00000506233 CENPJQ9HC77 1338 aaPredicted RBP8.01□□□□□ -1.13
SCLT1-207ENST00000506233 ABCA3Q99758 1704 aa8.01□□□□□ -1.13
SCLT1-207ENST00000506233 ADAMTS19Q8TE59 1207 aa8.01□□□□□ -1.13
SCLT1-207ENST00000506233 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.01□□□□□ -1.13
SCLT1-207ENST00000506233 MRS2Q9HD23 443 aa8□□□□□ -1.13
SCLT1-207ENST00000506233 FAM208AQ9UK61 1670 aaKnown RBP8□□□□□ -1.13
SCLT1-207ENST00000506233 BRD1O95696 1058 aa8□□□□□ -1.13
SCLT1-207ENST00000506233 TRAK1Q9UPV9 953 aa8□□□□□ -1.13
SCLT1-207ENST00000506233 DUSP27Q5VZP5 1158 aa8□□□□□ -1.13
SCLT1-207ENST00000506233 TMF1P82094 1093 aa7.99□□□□□ -1.13
SCLT1-207ENST00000506233 MED1Q15648 1581 aaPredicted RBP7.99□□□□□ -1.13
SCLT1-207ENST00000506233 PRR29P0C7W0 189 aa7.99□□□□□ -1.13
SCLT1-207ENST00000506233 NLRP13Q86W25 1043 aa7.99□□□□□ -1.13
SCLT1-207ENST00000506233 TNRQ92752 1358 aa7.99□□□□□ -1.13
SCLT1-207ENST00000506233 OSBPP22059 807 aa7.99□□□□□ -1.13
SCLT1-207ENST00000506233 RFX1P22670 979 aa7.99□□□□□ -1.13
SCLT1-207ENST00000506233 CC2D1BQ5T0F9 858 aaKnown RBP7.99□□□□□ -1.13
SCLT1-207ENST00000506233 SRPK2P78362 688 aaKnown RBP7.98□□□□□ -1.13
SCLT1-207ENST00000506233 HNRNPUQ00839 825 aaKnown RBP eCLIP7.98□□□□□ -1.13
SCLT1-207ENST00000506233 WAPLQ7Z5K2 1190 aa7.98□□□□□ -1.13
SCLT1-207ENST00000506233 MTMR14Q8NCE2 650 aa7.98□□□□□ -1.13
SCLT1-207ENST00000506233 FAM9BQ8IZU0 186 aa7.98□□□□□ -1.13
SCLT1-207ENST00000506233 CALR3Q96L12 384 aaKnown RBP7.98□□□□□ -1.13
SCLT1-207ENST00000506233 SPDYE5A6NIY4 337 aa7.98□□□□□ -1.13
SCLT1-207ENST00000506233 FYB1O15117 783 aa7.98□□□□□ -1.13
SCLT1-207ENST00000506233 SND1Q7KZF4 910 aaKnown RBP eCLIP7.98□□□□□ -1.13
SCLT1-207ENST00000506233 EIF3AQ14152 1382 aaKnown RBP7.98□□□□□ -1.13
SCLT1-207ENST00000506233 SOX12O15370 315 aa7.97□□□□□ -1.13
SCLT1-207ENST00000506233 CEBPAP49715 358 aaPredicted RBP7.97□□□□□ -1.13
SCLT1-207ENST00000506233 NLRP7Q8WX94 980 aa7.97□□□□□ -1.13
SCLT1-207ENST00000506233 TMUB1Q9BVT8 246 aa7.97□□□□□ -1.13
SCLT1-207ENST00000506233 KCNA1Q09470 495 aa7.97□□□□□ -1.13
SCLT1-207ENST00000506233 SKIV2LQ15477 1246 aaKnown RBP7.97□□□□□ -1.13
SCLT1-207ENST00000506233 SIRT1Q96EB6 747 aa7.97□□□□□ -1.13
SCLT1-207ENST00000506233 CCDC61Q9Y6R9 512 aa7.97□□□□□ -1.13
SCLT1-207ENST00000506233 MST1RQ04912 1400 aa7.97□□□□□ -1.13
SCLT1-207ENST00000506233 FBLN1P23142 703 aa7.97□□□□□ -1.13
SCLT1-207ENST00000506233 C20orf194Q5TEA3 1177 aa7.96□□□□□ -1.13
SCLT1-207ENST00000506233 KDM3BQ7LBC6 1761 aa7.96□□□□□ -1.14
SCLT1-207ENST00000506233 C1QBPQ07021 282 aaKnown RBP7.96□□□□□ -1.14
SCLT1-207ENST00000506233 DSG2Q14126 1118 aa7.96□□□□□ -1.14
SCLT1-207ENST00000506233 EP400Q96L91 3159 aa7.96□□□□□ -1.14
SCLT1-207ENST00000506233 NCAPD2Q15021 1401 aa7.96□□□□□ -1.14
SCLT1-207ENST00000506233 PRAM1Q96QH2 718 aa7.96□□□□□ -1.14
SCLT1-207ENST00000506233 NOM1Q5C9Z4 860 aaKnown RBP7.95□□□□□ -1.14
SCLT1-207ENST00000506233 NUDCQ9Y266 331 aa7.95□□□□□ -1.14
SCLT1-207ENST00000506233 USP31Q70CQ4 1352 aa7.95□□□□□ -1.14
SCLT1-207ENST00000506233 ZRANB1Q9UGI0 708 aa7.95□□□□□ -1.14
SCLT1-207ENST00000506233 TXNDC2Q86VQ3 553 aa7.94□□□□□ -1.14
SCLT1-207ENST00000506233 CDK12Q9NYV4 1490 aaPredicted RBP7.94□□□□□ -1.14
SCLT1-207ENST00000506233 SLIT3O75094 1523 aa7.94□□□□□ -1.14
SCLT1-207ENST00000506233 KDM2BQ8NHM5 1336 aa7.94□□□□□ -1.14
SCLT1-207ENST00000506233 HIC1Q14526 733 aa7.94□□□□□ -1.14
SCLT1-207ENST00000506233 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.94□□□□□ -1.14
SCLT1-207ENST00000506233 NINLQ9Y2I6 1382 aa7.94□□□□□ -1.14
SCLT1-207ENST00000506233 TRIM35Q9UPQ4 493 aa7.93□□□□□ -1.14
SCLT1-207ENST00000506233 IRX6P78412 446 aaPredicted RBP7.93□□□□□ -1.14
SCLT1-207ENST00000506233 ZNF579Q8NAF0 562 aaKnown RBP7.93□□□□□ -1.14
SCLT1-207ENST00000506233 PPIP5K1Q6PFW1 1433 aa7.93□□□□□ -1.14
SCLT1-207ENST00000506233 TBC1D2BQ9UPU7 963 aa7.93□□□□□ -1.14
SCLT1-207ENST00000506233 RFC5P40937 340 aa7.92□□□□□ -1.14
SCLT1-207ENST00000506233 PBXIP1Q96AQ6 731 aa7.92□□□□□ -1.14
SCLT1-207ENST00000506233 BEGAINQ9BUH8 593 aa7.92□□□□□ -1.14
SCLT1-207ENST00000506233 GPHNQ9NQX3 736 aaPredicted RBP7.92□□□□□ -1.14
SCLT1-207ENST00000506233 NSD2O96028 1365 aa7.92□□□□□ -1.14
SCLT1-207ENST00000506233 SLFN5Q08AF3 891 aa7.92□□□□□ -1.14
SCLT1-207ENST00000506233 MYSM1Q5VVJ2 828 aa7.92□□□□□ -1.14
SCLT1-207ENST00000506233 CCDC125Q86Z20 511 aa7.92□□□□□ -1.14
SCLT1-207ENST00000506233 USP6P35125 1406 aa7.92□□□□□ -1.14
SCLT1-207ENST00000506233 MDM2Q00987 491 aaPredicted RBP7.92□□□□□ -1.14
SCLT1-207ENST00000506233 PTGDRQ13258 359 aa7.92□□□□□ -1.14
SCLT1-207ENST00000506233 EDC4Q6P2E9 1401 aaKnown RBP7.92□□□□□ -1.14
SCLT1-207ENST00000506233 GOLGB1Q14789 3259 aaKnown RBP7.91□□□□□ -1.14
SCLT1-207ENST00000506233 SPDYE1Q8NFV5 336 aaPredicted RBP7.91□□□□□ -1.14
SCLT1-207ENST00000506233 RGS12O14924 1447 aa7.91□□□□□ -1.14
SCLT1-207ENST00000506233 AATKQ6ZMQ8 1374 aa7.91□□□□□ -1.14
SCLT1-207ENST00000506233 TBC1D12O60347 775 aa7.91□□□□□ -1.14
SCLT1-207ENST00000506233 TMEM88BA6NKF7 163 aa7.91□□□□□ -1.14
SCLT1-207ENST00000506233 SKAP1Q86WV1 359 aa7.91□□□□□ -1.14
SCLT1-207ENST00000506233 CDK19Q9BWU1 502 aa7.91□□□□□ -1.14
SCLT1-207ENST00000506233 ABL2P42684 1182 aa7.9□□□□□ -1.14
SCLT1-207ENST00000506233 SMARCA5O60264 1052 aaPredicted RBP7.9□□□□□ -1.14
SCLT1-207ENST00000506233 PIK3R4Q99570 1358 aa7.9□□□□□ -1.15
SCLT1-207ENST00000506233 MRRFQ96E11 262 aaKnown RBP7.9□□□□□ -1.15
SCLT1-207ENST00000506233 LMTK3Q96Q04 1460 aa7.89□□□□□ -1.15
SCLT1-207ENST00000506233 PPM1GO15355 546 aaPredicted RBP7.89□□□□□ -1.15
SCLT1-207ENST00000506233 DDX12PQ92771 950 aa7.89□□□□□ -1.15
SCLT1-207ENST00000506233 POLKQ9UBT6 870 aa7.89□□□□□ -1.15
SCLT1-207ENST00000506233 TNNQ9UQP3 1299 aa7.89□□□□□ -1.15
SCLT1-207ENST00000506233 FARP1Q9Y4F1 1045 aaPredicted RBP7.89□□□□□ -1.15
SCLT1-207ENST00000506233 C5P01031 1676 aa7.89□□□□□ -1.15
SCLT1-207ENST00000506233 SSTR3P32745 418 aaPredicted RBP7.89□□□□□ -1.15
SCLT1-207ENST00000506233 FAM161AQ3B820 660 aa7.89□□□□□ -1.15
SCLT1-207ENST00000506233 PAPPAQ13219 1627 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms