RNA–Protein interactions for RNA: ENST00000506178.1

SLC1A3-208, Transcript of solute carrier family 1 member 3, humanhuman

TSL 2

Gene SLC1A3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-208ENST00000506178 SHANK3Q9BYB0 1731 aa14.29□□□□□ -0.12
SLC1A3-208ENST00000506178 PRIM1P49642 420 aaKnown RBP14.29□□□□□ -0.12
SLC1A3-208ENST00000506178 SLC27A3Q5K4L6 730 aa14.29□□□□□ -0.12
SLC1A3-208ENST00000506178 HDGFL2Q7Z4V5 671 aaPredicted RBP14.29□□□□□ -0.12
SLC1A3-208ENST00000506178 MEGF6O75095 1541 aa14.28□□□□□ -0.12
SLC1A3-208ENST00000506178 GPR162Q16538 588 aa14.28□□□□□ -0.12
SLC1A3-208ENST00000506178 MAP3K19Q56UN5 1328 aa14.28□□□□□ -0.12
SLC1A3-208ENST00000506178 ANKRD36BQ8N2N9 1353 aa14.28□□□□□ -0.12
SLC1A3-208ENST00000506178 SLC16A10Q8TF71 515 aa14.28□□□□□ -0.12
SLC1A3-208ENST00000506178 KAT6BQ8WYB5 2073 aa14.28□□□□□ -0.12
SLC1A3-208ENST00000506178 TESK2Q96S53 571 aa14.28□□□□□ -0.12
SLC1A3-208ENST00000506178 RGPD2P0DJD1 1756 aa14.27□□□□□ -0.12
SLC1A3-208ENST00000506178 LY75O60449 1722 aa14.27□□□□□ -0.12
SLC1A3-208ENST00000506178 SENP3-EIF4A1A0A087X0R7 540 aa14.27□□□□□ -0.13
SLC1A3-208ENST00000506178 HOXC9P31274 260 aa14.27□□□□□ -0.13
SLC1A3-208ENST00000506178 PUS7Q96PZ0 661 aaKnown RBP14.27□□□□□ -0.13
SLC1A3-208ENST00000506178 TERF2IPQ9NYB0 399 aa14.27□□□□□ -0.13
SLC1A3-208ENST00000506178 DOT1LQ8TEK3 1739 aa14.27□□□□□ -0.13
SLC1A3-208ENST00000506178 YBX3P16989 372 aaKnown RBP eCLIP14.26□□□□□ -0.13
SLC1A3-208ENST00000506178 TFCP2L1Q9NZI6 479 aa14.26□□□□□ -0.13
SLC1A3-208ENST00000506178 NBPF6Q5VWK0 638 aa14.24□□□□□ -0.13
SLC1A3-208ENST00000506178 COL23A1Q86Y22 540 aaPredicted RBP14.24□□□□□ -0.13
SLC1A3-208ENST00000506178 KLHL34Q8N239 644 aa14.24□□□□□ -0.13
SLC1A3-208ENST00000506178 ZCRB1Q8TBF4 217 aaKnown RBP14.24□□□□□ -0.13
SLC1A3-208ENST00000506178 SYTL4Q96C24 671 aaPredicted RBP14.24□□□□□ -0.13
SLC1A3-208ENST00000506178 NBPF4Q96M43 638 aa14.24□□□□□ -0.13
SLC1A3-208ENST00000506178 POLD1P28340 1107 aa14.23□□□□□ -0.13
SLC1A3-208ENST00000506178 CEP350Q5VT06 3117 aa14.22□□□□□ -0.13
SLC1A3-208ENST00000506178 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
SLC1A3-208ENST00000506178 USHBP1Q8N6Y0 703 aa14.22□□□□□ -0.13
SLC1A3-208ENST00000506178 CCNL1Q9UK58 526 aaPredicted RBP14.22□□□□□ -0.13
SLC1A3-208ENST00000506178 ST20-MTHFSA0A0A6YYL1 179 aa14.21□□□□□ -0.13
SLC1A3-208ENST00000506178 RRS1Q15050 365 aaKnown RBP14.21□□□□□ -0.13
SLC1A3-208ENST00000506178 COG3Q96JB2 828 aa14.21□□□□□ -0.13
SLC1A3-208ENST00000506178 AMPHP49418 695 aa14.2□□□□□ -0.14
SLC1A3-208ENST00000506178 MSL1Q68DK7 614 aa14.2□□□□□ -0.14
SLC1A3-208ENST00000506178 AMIGO3Q86WK7 504 aa14.2□□□□□ -0.14
SLC1A3-208ENST00000506178 FYB1O15117 783 aa14.19□□□□□ -0.14
SLC1A3-208ENST00000506178 GIGYF1O75420 1035 aaPredicted RBP14.18□□□□□ -0.14
SLC1A3-208ENST00000506178 GGNBP2Q9H3C7 697 aa14.18□□□□□ -0.14
SLC1A3-208ENST00000506178 RTL1A6NKG5 1358 aa14.18□□□□□ -0.14
SLC1A3-208ENST00000506178 HSP90AB2PQ58FF8 381 aa14.17□□□□□ -0.14
SLC1A3-208ENST00000506178 SMIM5Q71RC9 77 aa14.17□□□□□ -0.14
SLC1A3-208ENST00000506178 CYP27B1O15528 508 aa14.16□□□□□ -0.14
SLC1A3-208ENST00000506178 USP47Q96K76 1375 aa14.16□□□□□ -0.14
SLC1A3-208ENST00000506178 C5P01031 1676 aa14.16□□□□□ -0.14
SLC1A3-208ENST00000506178 TOGARAM1Q9Y4F4 1720 aa14.15□□□□□ -0.14
SLC1A3-208ENST00000506178 TAF1LQ8IZX4 1826 aa14.15□□□□□ -0.14
SLC1A3-208ENST00000506178 CGNL1Q0VF96 1302 aa14.15□□□□□ -0.15
SLC1A3-208ENST00000506178 TONSLQ96HA7 1378 aa14.14□□□□□ -0.15
SLC1A3-208ENST00000506178 GRIN3BO60391 1043 aa14.14□□□□□ -0.15
SLC1A3-208ENST00000506178 ATP10DQ9P241 1426 aa14.14□□□□□ -0.15
SLC1A3-208ENST00000506178 ADCY9O60503 1353 aa14.13□□□□□ -0.15
SLC1A3-208ENST00000506178 INSRP06213 1382 aa14.13□□□□□ -0.15
SLC1A3-208ENST00000506178 PALLDQ8WX93 1383 aa14.13□□□□□ -0.15
SLC1A3-208ENST00000506178 RAPGEF4Q8WZA2 1011 aa14.13□□□□□ -0.15
SLC1A3-208ENST00000506178 CD2APQ9Y5K6 639 aa14.13□□□□□ -0.15
SLC1A3-208ENST00000506178 TATP17735 454 aaPredicted RBP14.12□□□□□ -0.15
SLC1A3-208ENST00000506178 NCBP3Q53F19 620 aaKnown RBP14.12□□□□□ -0.15
SLC1A3-208ENST00000506178 MPRIPQ6WCQ1 1025 aa14.12□□□□□ -0.15
SLC1A3-208ENST00000506178 C4BP0C0L5 1744 aa14.11□□□□□ -0.15
SLC1A3-208ENST00000506178 NCAPD2Q15021 1401 aa14.11□□□□□ -0.15
SLC1A3-208ENST00000506178 PIGBQ92521 554 aa14.11□□□□□ -0.15
SLC1A3-208ENST00000506178 CARD14Q9BXL6 1004 aa14.11□□□□□ -0.15
SLC1A3-208ENST00000506178 PCDH11XQ9BZA7 1347 aa14.11□□□□□ -0.15
SLC1A3-208ENST00000506178 PCDH11YQ9BZA8 1340 aa14.11□□□□□ -0.15
SLC1A3-208ENST00000506178 ITGB4P16144 1822 aa14.11□□□□□ -0.15
SLC1A3-208ENST00000506178 EMILIN1Q9Y6C2 1016 aa14.1□□□□□ -0.15
SLC1A3-208ENST00000506178 MAP2P11137 1827 aaKnown RBP14.1□□□□□ -0.15
SLC1A3-208ENST00000506178 UBR3Q6ZT12 1888 aa14.1□□□□□ -0.15
SLC1A3-208ENST00000506178 FLT4P35916 1363 aa14.09□□□□□ -0.15
SLC1A3-208ENST00000506178 NKX1-1Q15270 411 aaPredicted RBP14.09□□□□□ -0.15
SLC1A3-208ENST00000506178 IFFO2Q5TF58 517 aa14.09□□□□□ -0.15
SLC1A3-208ENST00000506178 PKD1L3Q7Z443 1732 aa14.09□□□□□ -0.15
SLC1A3-208ENST00000506178 SMG6Q86US8 1419 aaKnown RBP14.08□□□□□ -0.15
SLC1A3-208ENST00000506178 NPM3O75607 178 aaKnown RBP14.08□□□□□ -0.16
SLC1A3-208ENST00000506178 LINC00116Q8NCU8 138 aa14.08□□□□□ -0.16
SLC1A3-208ENST00000506178 FLAD1Q8NFF5 587 aa14.08□□□□□ -0.16
SLC1A3-208ENST00000506178 WWC3Q9ULE0 1092 aa14.08□□□□□ -0.16
SLC1A3-208ENST00000506178 KIF20BQ96Q89 1820 aa14.07□□□□□ -0.16
SLC1A3-208ENST00000506178 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.07□□□□□ -0.16
SLC1A3-208ENST00000506178 ITPK1Q13572 414 aa14.07□□□□□ -0.16
SLC1A3-208ENST00000506178 KIF24Q5T7B8 1368 aa14.07□□□□□ -0.16
SLC1A3-208ENST00000506178 PHF14O94880 888 aa14.06□□□□□ -0.16
SLC1A3-208ENST00000506178 IGSF1Q8N6C5 1336 aa14.06□□□□□ -0.16
SLC1A3-208ENST00000506178 SLC24A1O60721 1099 aa14.05□□□□□ -0.16
SLC1A3-208ENST00000506178 TMF1P82094 1093 aa14.05□□□□□ -0.16
SLC1A3-208ENST00000506178 ZNF526Q8TF50 670 aaPredicted RBP14.05□□□□□ -0.16
SLC1A3-208ENST00000506178 SMARCC1Q92922 1105 aaPredicted RBP14.05□□□□□ -0.16
SLC1A3-208ENST00000506178 AK7Q96M32 723 aa14.05□□□□□ -0.16
SLC1A3-208ENST00000506178 GPBP1L1Q9HC44 474 aaPredicted RBP14.05□□□□□ -0.16
SLC1A3-208ENST00000506178 ASAP1Q9ULH1 1129 aa14.05□□□□□ -0.16
SLC1A3-208ENST00000506178 LOC102724428A0A0B4J2F2 783 aa14.04□□□□□ -0.16
SLC1A3-208ENST00000506178 SIK1P57059 783 aa14.04□□□□□ -0.16
SLC1A3-208ENST00000506178 EYA1Q99502 592 aa14.04□□□□□ -0.16
SLC1A3-208ENST00000506178 ANKRD26Q9UPS8 1709 aa14.04□□□□□ -0.16
SLC1A3-208ENST00000506178 SSFA2P28290 1259 aa14.03□□□□□ -0.16
SLC1A3-208ENST00000506178 NSD3Q9BZ95 1437 aa14.03□□□□□ -0.16
SLC1A3-208ENST00000506178 KIAA1551Q9HCM1 1747 aa14.03□□□□□ -0.16
SLC1A3-208ENST00000506178 WASHC2AQ641Q2 1341 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms