RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 PMFBP1Q8TBY8 1022 aa3.02□□□□□ -1.93
NEDD4-205ENST00000506154 PARD3Q8TEW0 1356 aa3.02□□□□□ -1.93
NEDD4-205ENST00000506154 TRAK2O60296 914 aa3.02□□□□□ -1.93
NEDD4-205ENST00000506154 PPP1R15AO75807 674 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-205ENST00000506154 NDUFV2P19404 249 aa3.02□□□□□ -1.93
NEDD4-205ENST00000506154 MKL1Q969V6 931 aa3.02□□□□□ -1.93
NEDD4-205ENST00000506154 TBC1D2BQ9UPU7 963 aa3.02□□□□□ -1.93
NEDD4-205ENST00000506154 NWD2Q9ULI1 1742 aa3.02□□□□□ -1.93
NEDD4-205ENST00000506154 RPGRIP1LQ68CZ1 1315 aa3.02□□□□□ -1.93
NEDD4-205ENST00000506154 TESPA1A2RU30 521 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-205ENST00000506154 TERF1P54274 439 aa3.02□□□□□ -1.93
NEDD4-205ENST00000506154 SETD1BQ9UPS6 1966 aaKnown RBP3.02□□□□□ -1.93
NEDD4-205ENST00000506154 BLMP54132 1417 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-205ENST00000506154 TOGARAM1Q9Y4F4 1720 aa3.02□□□□□ -1.93
NEDD4-205ENST00000506154 ZMYM3Q14202 1370 aa3.02□□□□□ -1.93
NEDD4-205ENST00000506154 ROBO1Q9Y6N7 1651 aa3.02□□□□□ -1.93
NEDD4-205ENST00000506154 MAP3K13O43283 966 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 CLCN1P35523 988 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 MTMR3Q13615 1198 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 SMAP1Q8IYB5 467 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-205ENST00000506154 USP31Q70CQ4 1352 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 LMOD1P29536 600 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-205ENST00000506154 AFAP1Q8N556 730 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 DCAF11Q8TEB1 546 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 RRAGDQ9NQL2 400 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-205ENST00000506154 IBTKQ9P2D0 1353 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-205ENST00000506154 NUTM2BA6NNL0 878 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-205ENST00000506154 NUTM2EB1AL46 878 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-205ENST00000506154 ABL1P00519 1130 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 NUTM2DQ5VT03 806 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-205ENST00000506154 NUTM2AQ8IVF1 878 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-205ENST00000506154 EPS8L1Q8TE68 723 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 GLMNQ92990 594 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 STAG3Q9UJ98 1225 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 VIRMAQ69YN4 1812 aaKnown RBP3.01□□□□□ -1.93
NEDD4-205ENST00000506154 UNCXA6NJT0 531 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 SOX12O15370 315 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 C1QBPQ07021 282 aaKnown RBP3.01□□□□□ -1.93
NEDD4-205ENST00000506154 MAP2P11137 1827 aaKnown RBP3.01□□□□□ -1.93
NEDD4-205ENST00000506154 KDM4FA0A1W2PPD8 638 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 PLEKHD1A6NEE1 506 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 CC2D2BQ6DHV5 1058 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 CABLES1Q8TDN4 633 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 EMILIN3Q9NT22 766 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 GLIPR1L2Q4G1C9 344 aa3.01□□□□□ -1.93
NEDD4-205ENST00000506154 DNAJC2Q99543 621 aaKnown RBP3.01□□□□□ -1.93
NEDD4-205ENST00000506154 ZBTB47Q9UFB7 747 aaPredicted RBP3□□□□□ -1.93
NEDD4-205ENST00000506154 FAM177A1Q8N128 213 aaPredicted RBP3□□□□□ -1.93
NEDD4-205ENST00000506154 PCMTD1Q96MG8 357 aaPredicted RBP3□□□□□ -1.93
NEDD4-205ENST00000506154 YY1AP1Q9H869 796 aa3□□□□□ -1.93
NEDD4-205ENST00000506154 CCDC85CA6NKD9 419 aa3□□□□□ -1.93
NEDD4-205ENST00000506154 MCM6Q14566 821 aa3□□□□□ -1.93
NEDD4-205ENST00000506154 MPHOSPH9Q99550 1183 aa3□□□□□ -1.93
NEDD4-205ENST00000506154 PDCL3Q9H2J4 239 aa3□□□□□ -1.93
NEDD4-205ENST00000506154 ZSCAN20P17040 1043 aaPredicted RBP3□□□□□ -1.93
NEDD4-205ENST00000506154 BEGAINQ9BUH8 593 aa3□□□□□ -1.93
NEDD4-205ENST00000506154 CARD10Q9BWT7 1032 aa3□□□□□ -1.93
NEDD4-205ENST00000506154 CHMP4BQ9H444 224 aaKnown RBP3□□□□□ -1.93
NEDD4-205ENST00000506154 COL5A2P05997 1499 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-205ENST00000506154 SLFNL1Q499Z3 407 aa2.99□□□□□ -1.93
NEDD4-205ENST00000506154 CWC22Q9HCG8 908 aaKnown RBP2.99□□□□□ -1.93
NEDD4-205ENST00000506154 NOP58Q9Y2X3 529 aaKnown RBP2.99□□□□□ -1.93
NEDD4-205ENST00000506154 NAP1L5Q96NT1 182 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-205ENST00000506154 C14orf93Q9H972 538 aaKnown RBP2.99□□□□□ -1.93
NEDD4-205ENST00000506154 BRPF3Q9ULD4 1205 aa2.99□□□□□ -1.93
NEDD4-205ENST00000506154 VTI1AQ96AJ9 217 aa2.99□□□□□ -1.93
NEDD4-205ENST00000506154 MAP3K7O43318 606 aa2.99□□□□□ -1.93
NEDD4-205ENST00000506154 CCER1Q8TC90 406 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-205ENST00000506154 C5P01031 1676 aa2.99□□□□□ -1.93
NEDD4-205ENST00000506154 METP08581 1390 aa2.99□□□□□ -1.93
NEDD4-205ENST00000506154 SMAPO00193 183 aa2.99□□□□□ -1.93
NEDD4-205ENST00000506154 SERPINB4P48594 390 aa2.99□□□□□ -1.93
NEDD4-205ENST00000506154 BORCS6Q96GS4 357 aa2.99□□□□□ -1.93
NEDD4-205ENST00000506154 KIAA1551Q9HCM1 1747 aa2.99□□□□□ -1.93
NEDD4-205ENST00000506154 BRD4O60885 1362 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-205ENST00000506154 BCL9O00512 1426 aa2.99□□□□□ -1.93
NEDD4-205ENST00000506154 DMTNQ08495 405 aa2.98□□□□□ -1.93
NEDD4-205ENST00000506154 SKIV2LQ15477 1246 aaKnown RBP2.98□□□□□ -1.93
NEDD4-205ENST00000506154 TSNAXIP1Q2TAA8 658 aa2.98□□□□□ -1.93
NEDD4-205ENST00000506154 COL5A3P25940 1745 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-205ENST00000506154 MAP3K9P80192 1104 aa2.98□□□□□ -1.93
NEDD4-205ENST00000506154 NBPF20Q3BBV1 942 aa2.98□□□□□ -1.93
NEDD4-205ENST00000506154 KHSRPQ92945 711 aaKnown RBP eCLIP2.98□□□□□ -1.936e-7■■■■■ 30.7
NEDD4-205ENST00000506154 MS4A4AQ96JQ5 239 aa2.98□□□□□ -1.93
NEDD4-205ENST00000506154 KDRP35968 1356 aa2.98□□□□□ -1.93
NEDD4-205ENST00000506154 MCCP23508 829 aa2.98□□□□□ -1.93
NEDD4-205ENST00000506154 QPCTQ16769 361 aa2.98□□□□□ -1.93
NEDD4-205ENST00000506154 ZNF467Q7Z7K2 595 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-205ENST00000506154 CFDP1Q9UEE9 299 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-205ENST00000506154 ADGRL3Q9HAR2 1447 aa2.98□□□□□ -1.93
NEDD4-205ENST00000506154 FSD2A1L4K1 749 aa2.98□□□□□ -1.93
NEDD4-205ENST00000506154 ZNF211Q13398 564 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-205ENST00000506154 DSG2Q14126 1118 aa2.98□□□□□ -1.93
NEDD4-205ENST00000506154 HNRNPMP52272 730 aaKnown RBP eCLIP2.98□□□□□ -1.93
NEDD4-205ENST00000506154 HDGFL1Q5TGJ6 251 aa2.98□□□□□ -1.93
NEDD4-205ENST00000506154 TULP2O00295 520 aa2.98□□□□□ -1.93
NEDD4-205ENST00000506154 KANK1Q14678 1352 aa2.98□□□□□ -1.93
NEDD4-205ENST00000506154 PPP1R15BQ5SWA1 713 aa2.98□□□□□ -1.93
NEDD4-205ENST00000506154 RIMS2Q9UQ26 1411 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 ZNF521Q96K83 1311 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms