RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 MSL1Q68DK7 614 aa11.59□□□□□ -0.55
SNF8-204ENST00000506104 ZCRB1Q8TBF4 217 aaKnown RBP11.59□□□□□ -0.55
SNF8-204ENST00000506104 SGIP1Q9BQI5 828 aa11.59□□□□□ -0.55
SNF8-204ENST00000506104 HOXC9P31274 260 aa11.58□□□□□ -0.56
SNF8-204ENST00000506104 RRS1Q15050 365 aaKnown RBP11.58□□□□□ -0.56
SNF8-204ENST00000506104 SLC27A3Q5K4L6 730 aa11.58□□□□□ -0.56
SNF8-204ENST00000506104 MAP3K19Q56UN5 1328 aa11.58□□□□□ -0.56
SNF8-204ENST00000506104 PNPLA7Q6ZV29 1317 aa11.58□□□□□ -0.56
SNF8-204ENST00000506104 ST20-MTHFSA0A0A6YYL1 179 aa11.57□□□□□ -0.56
SNF8-204ENST00000506104 NLGN2Q8NFZ4 835 aa11.57□□□□□ -0.56
SNF8-204ENST00000506104 SLC16A10Q8TF71 515 aa11.57□□□□□ -0.56
SNF8-204ENST00000506104 RAPGEF4Q8WZA2 1011 aa11.57□□□□□ -0.56
SNF8-204ENST00000506104 AKT1S1Q96B36 256 aa11.57□□□□□ -0.56
SNF8-204ENST00000506104 GGNBP2Q9H3C7 697 aa11.57□□□□□ -0.56
SNF8-204ENST00000506104 QSER1Q2KHR3 1735 aa11.57□□□□□ -0.56
SNF8-204ENST00000506104 USP47Q96K76 1375 aa11.56□□□□□ -0.56
SNF8-204ENST00000506104 GIGYF1O75420 1035 aaPredicted RBP11.56□□□□□ -0.56
SNF8-204ENST00000506104 C1QTNF8P60827 252 aa11.56□□□□□ -0.56
SNF8-204ENST00000506104 WWC3Q9ULE0 1092 aa11.56□□□□□ -0.56
SNF8-204ENST00000506104 ANKRD36BQ8N2N9 1353 aa11.55□□□□□ -0.56
SNF8-204ENST00000506104 LY75O60449 1722 aa11.55□□□□□ -0.56
SNF8-204ENST00000506104 SHANK3Q9BYB0 1731 aa11.55□□□□□ -0.56
SNF8-204ENST00000506104 SMG6Q86US8 1419 aaKnown RBP11.55□□□□□ -0.56
SNF8-204ENST00000506104 TATP17735 454 aaPredicted RBP11.55□□□□□ -0.56
SNF8-204ENST00000506104 KIF20BQ96Q89 1820 aa11.54□□□□□ -0.56
SNF8-204ENST00000506104 PPM1GO15355 546 aaPredicted RBP11.54□□□□□ -0.56
SNF8-204ENST00000506104 NBPF6Q5VWK0 638 aa11.54□□□□□ -0.56
SNF8-204ENST00000506104 MPRIPQ6WCQ1 1025 aa11.54□□□□□ -0.56
SNF8-204ENST00000506104 NBPF4Q96M43 638 aa11.54□□□□□ -0.56
SNF8-204ENST00000506104 POLR3GLQ9BT43 218 aa11.54□□□□□ -0.56
SNF8-204ENST00000506104 MEGF6O75095 1541 aa11.54□□□□□ -0.56
SNF8-204ENST00000506104 COL23A1Q86Y22 540 aaPredicted RBP11.53□□□□□ -0.56
SNF8-204ENST00000506104 C5P01031 1676 aa11.52□□□□□ -0.56
SNF8-204ENST00000506104 PHF14O94880 888 aa11.52□□□□□ -0.57
SNF8-204ENST00000506104 TMF1P82094 1093 aa11.52□□□□□ -0.57
SNF8-204ENST00000506104 NCBP3Q53F19 620 aaKnown RBP11.52□□□□□ -0.57
SNF8-204ENST00000506104 ZNF526Q8TF50 670 aaPredicted RBP11.52□□□□□ -0.57
SNF8-204ENST00000506104 MAP3K5Q99683 1374 aa11.52□□□□□ -0.57
SNF8-204ENST00000506104 AK7Q96M32 723 aa11.51□□□□□ -0.57
SNF8-204ENST00000506104 ITGB4P16144 1822 aa11.51□□□□□ -0.57
SNF8-204ENST00000506104 GRIN3BO60391 1043 aa11.5□□□□□ -0.57
SNF8-204ENST00000506104 YBX3P16989 372 aaKnown RBP eCLIP11.5□□□□□ -0.572e-6■□□□□ 8.5
SNF8-204ENST00000506104 HSP90AB2PQ58FF8 381 aa11.5□□□□□ -0.57
SNF8-204ENST00000506104 PUS7Q96PZ0 661 aaKnown RBP11.5□□□□□ -0.57
SNF8-204ENST00000506104 TESK2Q96S53 571 aa11.5□□□□□ -0.57
SNF8-204ENST00000506104 TAF1LQ8IZX4 1826 aa11.5□□□□□ -0.57
SNF8-204ENST00000506104 NSD2O96028 1365 aa11.5□□□□□ -0.57
SNF8-204ENST00000506104 FYB1O15117 783 aa11.49□□□□□ -0.57
SNF8-204ENST00000506104 SMIM5Q71RC9 77 aa11.49□□□□□ -0.57
SNF8-204ENST00000506104 PCDH11XQ9BZA7 1347 aa11.49□□□□□ -0.57
SNF8-204ENST00000506104 PCDH11YQ9BZA8 1340 aa11.49□□□□□ -0.57
SNF8-204ENST00000506104 RTL1A6NKG5 1358 aa11.49□□□□□ -0.57
SNF8-204ENST00000506104 PALLDQ8WX93 1383 aa11.49□□□□□ -0.57
SNF8-204ENST00000506104 COL24A1Q17RW2 1714 aa11.49□□□□□ -0.57
SNF8-204ENST00000506104 SLC24A1O60721 1099 aa11.48□□□□□ -0.57
SNF8-204ENST00000506104 PIAS4Q8N2W9 510 aaPredicted RBP11.48□□□□□ -0.57
SNF8-204ENST00000506104 CGNL1Q0VF96 1302 aa11.47□□□□□ -0.57
SNF8-204ENST00000506104 MAP2P11137 1827 aaKnown RBP11.46□□□□□ -0.57
SNF8-204ENST00000506104 FLT4P35916 1363 aa11.46□□□□□ -0.57
SNF8-204ENST00000506104 FLAD1Q8NFF5 587 aa11.46□□□□□ -0.57
SNF8-204ENST00000506104 SMARCC1Q92922 1105 aaPredicted RBP11.46□□□□□ -0.57
SNF8-204ENST00000506104 GPBP1L1Q9HC44 474 aaPredicted RBP11.46□□□□□ -0.57
SNF8-204ENST00000506104 EMILIN1Q9Y6C2 1016 aa11.46□□□□□ -0.57
SNF8-204ENST00000506104 C4BP0C0L5 1744 aa11.46□□□□□ -0.58
SNF8-204ENST00000506104 ATP10DQ9P241 1426 aa11.45□□□□□ -0.58
SNF8-204ENST00000506104 TNNT2P45379 298 aaPredicted RBP11.45□□□□□ -0.58
SNF8-204ENST00000506104 CDCA8Q53HL2 280 aa11.45□□□□□ -0.58
SNF8-204ENST00000506104 SPG7Q9UQ90 795 aa11.45□□□□□ -0.58
SNF8-204ENST00000506104 TOGARAM1Q9Y4F4 1720 aa11.45□□□□□ -0.58
SNF8-204ENST00000506104 INSRP06213 1382 aa11.44□□□□□ -0.58
SNF8-204ENST00000506104 CYP27B1O15528 508 aa11.44□□□□□ -0.58
SNF8-204ENST00000506104 HMGB2P26583 209 aaKnown RBP11.44□□□□□ -0.58
SNF8-204ENST00000506104 PPP4R3CPQ6ZMV5 832 aa11.44□□□□□ -0.58
SNF8-204ENST00000506104 TMOD3Q9NYL9 352 aa11.44□□□□□ -0.58
SNF8-204ENST00000506104 NSD3Q9BZ95 1437 aa11.43□□□□□ -0.58
SNF8-204ENST00000506104 IGSF1Q8N6C5 1336 aa11.43□□□□□ -0.58
SNF8-204ENST00000506104 UBR3Q6ZT12 1888 aa11.43□□□□□ -0.58
SNF8-204ENST00000506104 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.43□□□□□ -0.58
SNF8-204ENST00000506104 GNPATO15228 680 aa11.43□□□□□ -0.58
SNF8-204ENST00000506104 PIGBQ92521 554 aa11.43□□□□□ -0.58
SNF8-204ENST00000506104 CD2APQ9Y5K6 639 aa11.43□□□□□ -0.58
SNF8-204ENST00000506104 ATP6V1AP38606 617 aa11.42□□□□□ -0.58
SNF8-204ENST00000506104 RBM42Q9BTD8 480 aaKnown RBP11.42□□□□□ -0.58
SNF8-204ENST00000506104 PKD1L3Q7Z443 1732 aa11.41□□□□□ -0.58
SNF8-204ENST00000506104 AMIGO3Q86WK7 504 aa11.41□□□□□ -0.58
SNF8-204ENST00000506104 LINC00116Q8NCU8 138 aa11.41□□□□□ -0.58
SNF8-204ENST00000506104 LOC102724428A0A0B4J2F2 783 aa11.4□□□□□ -0.58
SNF8-204ENST00000506104 SIK1P57059 783 aa11.4□□□□□ -0.58
SNF8-204ENST00000506104 CARD14Q9BXL6 1004 aa11.4□□□□□ -0.58
SNF8-204ENST00000506104 ASAP1Q9ULH1 1129 aa11.4□□□□□ -0.58
SNF8-204ENST00000506104 N4BP2Q86UW6 1770 aaPredicted RBP11.4□□□□□ -0.58
SNF8-204ENST00000506104 EYA1Q99502 592 aa11.39□□□□□ -0.59
SNF8-204ENST00000506104 MMP10P09238 476 aa11.38□□□□□ -0.59
SNF8-204ENST00000506104 SSFA2P28290 1259 aa11.38□□□□□ -0.59
SNF8-204ENST00000506104 IFNL2Q8IZJ0 200 aa11.38□□□□□ -0.59
SNF8-204ENST00000506104 BCS1LQ9Y276 419 aa11.38□□□□□ -0.59
SNF8-204ENST00000506104 ITPK1Q13572 414 aa11.37□□□□□ -0.59
SNF8-204ENST00000506104 PCGF6Q9BYE7 350 aa11.37□□□□□ -0.59
SNF8-204ENST00000506104 KIF24Q5T7B8 1368 aa11.37□□□□□ -0.59
SNF8-204ENST00000506104 PHKG2P15735 406 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms