RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 USHBP1Q8N6Y0 703 aa15.89■□□□□ 0.13
SIL1-208ENST00000505945 SLC27A3Q5K4L6 730 aa15.88■□□□□ 0.13
SIL1-208ENST00000505945 AKT1S1Q96B36 256 aa15.88■□□□□ 0.13
SIL1-208ENST00000505945 MEGF6O75095 1541 aa15.88■□□□□ 0.13
SIL1-208ENST00000505945 CDCA8Q53HL2 280 aa15.87■□□□□ 0.13
SIL1-208ENST00000505945 HSP90AB2PQ58FF8 381 aa15.87■□□□□ 0.13
SIL1-208ENST00000505945 ARXQ96QS3 562 aa15.87■□□□□ 0.13
SIL1-208ENST00000505945 CARD14Q9BXL6 1004 aa15.87■□□□□ 0.13
SIL1-208ENST00000505945 RTL1A6NKG5 1358 aa15.87■□□□□ 0.13
SIL1-208ENST00000505945 RAPGEF4Q8WZA2 1011 aa15.85■□□□□ 0.13
SIL1-208ENST00000505945 TFCP2L1Q9NZI6 479 aa15.85■□□□□ 0.13
SIL1-208ENST00000505945 NSD2O96028 1365 aa15.85■□□□□ 0.13
SIL1-208ENST00000505945 DOT1LQ8TEK3 1739 aa15.84■□□□□ 0.13
SIL1-208ENST00000505945 SHANK3Q9BYB0 1731 aa15.84■□□□□ 0.13
SIL1-208ENST00000505945 PNPLA7Q6ZV29 1317 aa15.84■□□□□ 0.13
SIL1-208ENST00000505945 INSRP06213 1382 aa15.84■□□□□ 0.13
SIL1-208ENST00000505945 SMG6Q86US8 1419 aaKnown RBP15.84■□□□□ 0.13
SIL1-208ENST00000505945 TATP17735 454 aaPredicted RBP15.83■□□□□ 0.12
SIL1-208ENST00000505945 SLC16A10Q8TF71 515 aa15.83■□□□□ 0.12
SIL1-208ENST00000505945 CGNL1Q0VF96 1302 aa15.83■□□□□ 0.12
SIL1-208ENST00000505945 UTRNP46939 3433 aa15.82■□□□□ 0.12
SIL1-208ENST00000505945 CCNL1Q9UK58 526 aaPredicted RBP15.82■□□□□ 0.12
SIL1-208ENST00000505945 FLT4P35916 1363 aa15.81■□□□□ 0.12
SIL1-208ENST00000505945 KIF20BQ96Q89 1820 aa15.81■□□□□ 0.12
SIL1-208ENST00000505945 EMILIN1Q9Y6C2 1016 aa15.81■□□□□ 0.12
SIL1-208ENST00000505945 NSD3Q9BZ95 1437 aa15.8■□□□□ 0.12
SIL1-208ENST00000505945 PPM1GO15355 546 aaPredicted RBP15.8■□□□□ 0.12
SIL1-208ENST00000505945 POLD1P28340 1107 aa15.8■□□□□ 0.12
SIL1-208ENST00000505945 KLHL34Q8N239 644 aa15.8■□□□□ 0.12
SIL1-208ENST00000505945 TIMELESSQ9UNS1 1208 aa15.8■□□□□ 0.12
SIL1-208ENST00000505945 LY75O60449 1722 aa15.8■□□□□ 0.12
SIL1-208ENST00000505945 KIF24Q5T7B8 1368 aa15.79■□□□□ 0.12
SIL1-208ENST00000505945 PCGF6Q9BYE7 350 aa15.79■□□□□ 0.12
SIL1-208ENST00000505945 MAP3K5Q99683 1374 aa15.78■□□□□ 0.12
SIL1-208ENST00000505945 PCDH11XQ9BZA7 1347 aa15.78■□□□□ 0.12
SIL1-208ENST00000505945 PCDH11YQ9BZA8 1340 aa15.78■□□□□ 0.12
SIL1-208ENST00000505945 QSER1Q2KHR3 1735 aa15.78■□□□□ 0.12
SIL1-208ENST00000505945 CYP27B1O15528 508 aa15.78■□□□□ 0.12
SIL1-208ENST00000505945 MSH5O43196 834 aa15.78■□□□□ 0.12
SIL1-208ENST00000505945 MPRIPQ6WCQ1 1025 aa15.78■□□□□ 0.12
SIL1-208ENST00000505945 COL23A1Q86Y22 540 aaPredicted RBP15.77■□□□□ 0.12
SIL1-208ENST00000505945 ZNF784Q8NCA9 323 aaPredicted RBP15.77■□□□□ 0.12
SIL1-208ENST00000505945 POLR3GLQ9BT43 218 aa15.77■□□□□ 0.12
SIL1-208ENST00000505945 TUBGCP6Q96RT7 1819 aa15.77■□□□□ 0.11
SIL1-208ENST00000505945 GPR162Q16538 588 aa15.76■□□□□ 0.11
SIL1-208ENST00000505945 WASHC2AQ641Q2 1341 aa15.74■□□□□ 0.11
SIL1-208ENST00000505945 COL24A1Q17RW2 1714 aa15.74■□□□□ 0.11
SIL1-208ENST00000505945 PALLDQ8WX93 1383 aa15.74■□□□□ 0.11
SIL1-208ENST00000505945 PELP1Q8IZL8 1130 aaKnown RBP15.73■□□□□ 0.11
SIL1-208ENST00000505945 NLGN2Q8NFZ4 835 aa15.73■□□□□ 0.11
SIL1-208ENST00000505945 EYA1Q99502 592 aa15.73■□□□□ 0.11
SIL1-208ENST00000505945 POLKQ9UBT6 870 aa15.73■□□□□ 0.11
SIL1-208ENST00000505945 CHD4Q14839 1912 aa15.72■□□□□ 0.11
SIL1-208ENST00000505945 CLSPNQ9HAW4 1339 aa15.72■□□□□ 0.11
SIL1-208ENST00000505945 TNNT2P45379 298 aaPredicted RBP15.72■□□□□ 0.11
SIL1-208ENST00000505945 MSL1Q68DK7 614 aa15.72■□□□□ 0.11
SIL1-208ENST00000505945 PIGBQ92521 554 aa15.72■□□□□ 0.11
SIL1-208ENST00000505945 SPG7Q9UQ90 795 aa15.72■□□□□ 0.11
SIL1-208ENST00000505945 MAP2P11137 1827 aaKnown RBP15.71■□□□□ 0.11
SIL1-208ENST00000505945 NKX1-1Q15270 411 aaPredicted RBP15.71■□□□□ 0.11
SIL1-208ENST00000505945 SMARCC1Q92922 1105 aaPredicted RBP15.71■□□□□ 0.11
SIL1-208ENST00000505945 NCAPD2Q15021 1401 aa15.7■□□□□ 0.1
SIL1-208ENST00000505945 ITGB4P16144 1822 aa15.7■□□□□ 0.1
SIL1-208ENST00000505945 C5P01031 1676 aa15.7■□□□□ 0.1
SIL1-208ENST00000505945 PKD1L3Q7Z443 1732 aa15.69■□□□□ 0.1
SIL1-208ENST00000505945 TOGARAM1Q9Y4F4 1720 aa15.69■□□□□ 0.1
SIL1-208ENST00000505945 HMGB2P26583 209 aaKnown RBP15.69■□□□□ 0.1
SIL1-208ENST00000505945 SMIM5Q71RC9 77 aa15.69■□□□□ 0.1
SIL1-208ENST00000505945 GOLGB1Q14789 3259 aaKnown RBP15.69■□□□□ 0.1
SIL1-208ENST00000505945 ANKRD26Q9UPS8 1709 aa15.68■□□□□ 0.1
SIL1-208ENST00000505945 EIF4A2Q14240 407 aaKnown RBP15.68■□□□□ 0.1
SIL1-208ENST00000505945 AMIGO3Q86WK7 504 aa15.68■□□□□ 0.1
SIL1-208ENST00000505945 FLAD1Q8NFF5 587 aa15.68■□□□□ 0.1
SIL1-208ENST00000505945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.68■□□□□ 0.1
SIL1-208ENST00000505945 TAF1LQ8IZX4 1826 aa15.68■□□□□ 0.1
SIL1-208ENST00000505945 HSPA5P11021 654 aaKnown RBP15.67■□□□□ 0.1
SIL1-208ENST00000505945 EIF4G2P78344 907 aaKnown RBP eCLIP15.67■□□□□ 0.1
SIL1-208ENST00000505945 AK7Q96M32 723 aa15.67■□□□□ 0.1
SIL1-208ENST00000505945 PANK3Q9H999 370 aa15.67■□□□□ 0.1
SIL1-208ENST00000505945 LOC102724428A0A0B4J2F2 783 aa15.66■□□□□ 0.1
SIL1-208ENST00000505945 PHF14O94880 888 aa15.66■□□□□ 0.1
SIL1-208ENST00000505945 PHKG2P15735 406 aa15.66■□□□□ 0.1
SIL1-208ENST00000505945 YBX3P16989 372 aaKnown RBP eCLIP15.66■□□□□ 0.1
SIL1-208ENST00000505945 SIK1P57059 783 aa15.66■□□□□ 0.1
SIL1-208ENST00000505945 IFNL2Q8IZJ0 200 aa15.66■□□□□ 0.1
SIL1-208ENST00000505945 TMOD3Q9NYL9 352 aa15.66■□□□□ 0.1
SIL1-208ENST00000505945 ASAP1Q9ULH1 1129 aa15.66■□□□□ 0.1
SIL1-208ENST00000505945 C4BP0C0L5 1744 aa15.65■□□□□ 0.1
SIL1-208ENST00000505945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.64■□□□□ 0.09
SIL1-208ENST00000505945 LINC00116Q8NCU8 138 aa15.64■□□□□ 0.09
SIL1-208ENST00000505945 GRIN3BO60391 1043 aa15.63■□□□□ 0.09
SIL1-208ENST00000505945 ITPK1Q13572 414 aa15.63■□□□□ 0.09
SIL1-208ENST00000505945 CD2APQ9Y5K6 639 aa15.63■□□□□ 0.09
SIL1-208ENST00000505945 ATP6V1AP38606 617 aa15.62■□□□□ 0.09
SIL1-208ENST00000505945 ATG3Q9NT62 314 aa15.62■□□□□ 0.09
SIL1-208ENST00000505945 C1QTNF8P60827 252 aa15.61■□□□□ 0.09
SIL1-208ENST00000505945 CCER1Q8TC90 406 aaPredicted RBP15.61■□□□□ 0.09
SIL1-208ENST00000505945 IGSF1Q8N6C5 1336 aa15.61■□□□□ 0.09
SIL1-208ENST00000505945 UBR3Q6ZT12 1888 aa15.61■□□□□ 0.09
SIL1-208ENST00000505945 GNPATO15228 680 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 344.4 ms