RNA–Protein interactions for RNA: ENST00000505747.5

THUMPD2-204, Transcript of THUMP domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD2, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-204ENST00000505747 LRRC37A3O60309 1634 aa23.35■■□□□ 1.33
THUMPD2-204ENST00000505747 ABCC6O95255 1503 aa23.34■■□□□ 1.33
THUMPD2-204ENST00000505747 CRB1P82279 1406 aa23.34■■□□□ 1.33
THUMPD2-204ENST00000505747 PDE3AQ14432 1141 aa23.34■■□□□ 1.33
THUMPD2-204ENST00000505747 SMC4Q9NTJ3 1288 aa23.34■■□□□ 1.33
THUMPD2-204ENST00000505747 LMO7Q8WWI1 1683 aa23.34■■□□□ 1.33
THUMPD2-204ENST00000505747 VIRMAQ69YN4 1812 aaKnown RBP23.33■■□□□ 1.33
THUMPD2-204ENST00000505747 GNAT3A8MTJ3 354 aa23.33■■□□□ 1.33
THUMPD2-204ENST00000505747 HTATSF1O43719 755 aaKnown RBP23.33■■□□□ 1.33
THUMPD2-204ENST00000505747 SSH1Q8WYL5 1049 aa23.33■■□□□ 1.33
THUMPD2-204ENST00000505747 KIAA0232Q92628 1395 aa23.33■■□□□ 1.33
THUMPD2-204ENST00000505747 FAM208AQ9UK61 1670 aaKnown RBP23.33■■□□□ 1.32
THUMPD2-204ENST00000505747 ROBO1Q9Y6N7 1651 aa23.33■■□□□ 1.32
THUMPD2-204ENST00000505747 CPDO75976 1380 aa23.32■■□□□ 1.32
THUMPD2-204ENST00000505747 MAP3K5Q99683 1374 aa23.32■■□□□ 1.32
THUMPD2-204ENST00000505747 CHL1O00533 1208 aa23.31■■□□□ 1.32
THUMPD2-204ENST00000505747 CHRNA2Q15822 529 aa23.31■■□□□ 1.32
THUMPD2-204ENST00000505747 TSPYL6Q8N831 410 aa23.31■■□□□ 1.32
THUMPD2-204ENST00000505747 VAMP4O75379 141 aa23.3■■□□□ 1.32
THUMPD2-204ENST00000505747 ALDH1L2Q3SY69 923 aa23.3■■□□□ 1.32
THUMPD2-204ENST00000505747 ZNF428Q96B54 188 aa23.3■■□□□ 1.32
THUMPD2-204ENST00000505747 PANK1Q8TE04 598 aa23.29■■□□□ 1.32
THUMPD2-204ENST00000505747 ELL2O00472 640 aaPredicted RBP23.29■■□□□ 1.32
THUMPD2-204ENST00000505747 TWISTNBQ3B726 338 aaPredicted RBP23.28■■□□□ 1.32
THUMPD2-204ENST00000505747 C8orf58Q8NAV2 365 aa23.28■■□□□ 1.32
THUMPD2-204ENST00000505747 TNNQ9UQP3 1299 aa23.28■■□□□ 1.32
THUMPD2-204ENST00000505747 ZKSCAN2Q63HK3 967 aa23.27■■□□□ 1.32
THUMPD2-204ENST00000505747 HAP1P54257 671 aaPredicted RBP23.26■■□□□ 1.31
THUMPD2-204ENST00000505747 PLEKHO1Q53GL0 409 aaPredicted RBP23.26■■□□□ 1.31
THUMPD2-204ENST00000505747 IL17REQ8NFR9 667 aa23.26■■□□□ 1.31
THUMPD2-204ENST00000505747 COG6Q9Y2V7 657 aa23.26■■□□□ 1.31
THUMPD2-204ENST00000505747 NLRP2Q9NX02 1062 aa23.25■■□□□ 1.31
THUMPD2-204ENST00000505747 RLBP1P12271 317 aa23.25■■□□□ 1.31
THUMPD2-204ENST00000505747 AMOTQ4VCS5 1084 aa23.25■■□□□ 1.31
THUMPD2-204ENST00000505747 MIS18AQ9NYP9 233 aa23.25■■□□□ 1.31
THUMPD2-204ENST00000505747 CSB-PGBD3P0DP91 1061 aa23.24■■□□□ 1.31
THUMPD2-204ENST00000505747 CLUAP1Q96AJ1 413 aa23.24■■□□□ 1.31
THUMPD2-204ENST00000505747 KIF16BQ96L93 1317 aa23.24■■□□□ 1.31
THUMPD2-204ENST00000505747 AHDC1Q5TGY3 1603 aaPredicted RBP23.23■■□□□ 1.31
THUMPD2-204ENST00000505747 PRDM11Q9NQV5 511 aa23.23■■□□□ 1.31
THUMPD2-204ENST00000505747 TSPYL4Q9UJ04 414 aa23.23■■□□□ 1.31
THUMPD2-204ENST00000505747 NOB1Q9ULX3 412 aaKnown RBP23.23■■□□□ 1.31
THUMPD2-204ENST00000505747 ZNF530Q6P9A1 599 aaPredicted RBP23.23■■□□□ 1.31
THUMPD2-204ENST00000505747 BRPF1P55201 1214 aaPredicted RBP23.22■■□□□ 1.31
THUMPD2-204ENST00000505747 KRT24Q2M2I5 525 aa23.22■■□□□ 1.31
THUMPD2-204ENST00000505747 AKAP4Q5JQC9 854 aa23.21■■□□□ 1.31
THUMPD2-204ENST00000505747 TRIM27P14373 513 aa23.21■■□□□ 1.31
THUMPD2-204ENST00000505747 ATF7IPQ6VMQ6 1270 aa23.21■■□□□ 1.31
THUMPD2-204ENST00000505747 DZIP1LQ8IYY4 767 aaKnown RBP23.21■■□□□ 1.31
THUMPD2-204ENST00000505747 CEMIPQ8WUJ3 1361 aa23.2■■□□□ 1.3
THUMPD2-204ENST00000505747 MS4A1P11836 297 aa23.2■■□□□ 1.3
THUMPD2-204ENST00000505747 FTSJ3Q8IY81 847 aaKnown RBP23.2■■□□□ 1.3
THUMPD2-204ENST00000505747 MRPL50Q8N5N7 158 aaKnown RBP23.2■■□□□ 1.3
THUMPD2-204ENST00000505747 RAPGEF4Q8WZA2 1011 aa23.2■■□□□ 1.3
THUMPD2-204ENST00000505747 IPO8O15397 1037 aaKnown RBP23.19■■□□□ 1.3
THUMPD2-204ENST00000505747 TCERG1O14776 1098 aaKnown RBP23.18■■□□□ 1.3
THUMPD2-204ENST00000505747 TAF7Q15545 349 aaPredicted RBP23.18■■□□□ 1.3
THUMPD2-204ENST00000505747 C1orf141Q5JVX7 400 aa23.18■■□□□ 1.3
THUMPD2-204ENST00000505747 LGR6Q9HBX8 967 aa23.18■■□□□ 1.3
THUMPD2-204ENST00000505747 MEGF6O75095 1541 aa23.17■■□□□ 1.3
THUMPD2-204ENST00000505747 COL5A2P05997 1499 aaPredicted RBP23.16■■□□□ 1.3
THUMPD2-204ENST00000505747 TATP17735 454 aaPredicted RBP23.16■■□□□ 1.3
THUMPD2-204ENST00000505747 KDM3BQ7LBC6 1761 aa23.16■■□□□ 1.3
THUMPD2-204ENST00000505747 PHLPP1O60346 1717 aa23.16■■□□□ 1.3
THUMPD2-204ENST00000505747 MVPQ14764 893 aaKnown RBP23.16■■□□□ 1.3
THUMPD2-204ENST00000505747 MPRIPQ6WCQ1 1025 aa23.16■■□□□ 1.3
THUMPD2-204ENST00000505747 BABAM1Q9NWV8 329 aa23.16■■□□□ 1.3
THUMPD2-204ENST00000505747 COL22A1Q8NFW1 1626 aaPredicted RBP23.15■■□□□ 1.3
THUMPD2-204ENST00000505747 PKD1L3Q7Z443 1732 aa23.15■■□□□ 1.3
THUMPD2-204ENST00000505747 WDR17Q8IZU2 1322 aa23.15■■□□□ 1.3
THUMPD2-204ENST00000505747 ADAMTS7Q9UKP4 1686 aa23.15■■□□□ 1.3
THUMPD2-204ENST00000505747 SIPA1L3O60292 1781 aaPredicted RBP23.14■■□□□ 1.29
THUMPD2-204ENST00000505747 SCN11AQ9UI33 1791 aa23.14■■□□□ 1.29
THUMPD2-204ENST00000505747 RNMTO43148 476 aaKnown RBP23.13■■□□□ 1.29
THUMPD2-204ENST00000505747 ARHGAP45Q92619 1136 aa23.12■■□□□ 1.29
THUMPD2-204ENST00000505747 PARP4Q9UKK3 1724 aaKnown RBP23.12■■□□□ 1.29
THUMPD2-204ENST00000505747 OVOS2A0A0G2JMS6 1433 aa23.12■■□□□ 1.29
THUMPD2-204ENST00000505747 CACNA1FO60840 1977 aa23.12■■□□□ 1.29
THUMPD2-204ENST00000505747 AAMPQ13685 434 aa23.12■■□□□ 1.29
THUMPD2-204ENST00000505747 KDM2BQ8NHM5 1336 aa23.12■■□□□ 1.29
THUMPD2-204ENST00000505747 PLEKHG2Q9H7P9 1386 aa23.11■■□□□ 1.29
THUMPD2-204ENST00000505747 TEFQ10587 303 aa23.11■■□□□ 1.29
THUMPD2-204ENST00000505747 TOM1L2Q6ZVM7 507 aa23.11■■□□□ 1.29
THUMPD2-204ENST00000505747 TMEM57Q8N5G2 664 aa23.1■■□□□ 1.29
THUMPD2-204ENST00000505747 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.1■■□□□ 1.292e-7■■□□□ 14.5
THUMPD2-204ENST00000505747 SPG7Q9UQ90 795 aa23.1■■□□□ 1.29
THUMPD2-204ENST00000505747 COL16A1Q07092 1604 aaPredicted RBP23.1■■□□□ 1.29
THUMPD2-204ENST00000505747 ITPRIPQ8IWB1 547 aa23.1■■□□□ 1.29
THUMPD2-204ENST00000505747 CENPQQ7L2Z9 268 aaPredicted RBP23.09■■□□□ 1.29
THUMPD2-204ENST00000505747 DDX19BQ9UMR2 479 aa23.09■■□□□ 1.29
THUMPD2-204ENST00000505747 COL14A1Q05707 1796 aaKnown RBP23.08■■□□□ 1.29
THUMPD2-204ENST00000505747 TOM1O60784 492 aa23.08■■□□□ 1.29
THUMPD2-204ENST00000505747 STRN4Q9NRL3 753 aa23.08■■□□□ 1.29
THUMPD2-204ENST00000505747 PHKG2P15735 406 aa23.07■■□□□ 1.28
THUMPD2-204ENST00000505747 BTBD11A6QL63 1104 aa23.06■■□□□ 1.28
THUMPD2-204ENST00000505747 EVA1CP58658 441 aa23.06■■□□□ 1.28
THUMPD2-204ENST00000505747 PIP4K2BP78356 416 aa23.06■■□□□ 1.28
THUMPD2-204ENST00000505747 LARP1Q6PKG0 1096 aaKnown RBP23.05■■□□□ 1.28
THUMPD2-204ENST00000505747 IFNL2Q8IZJ0 200 aa23.05■■□□□ 1.28
THUMPD2-204ENST00000505747 ABCC4O15439 1325 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms