RNA–Protein interactions for RNA: ENST00000505672.5

CCND3-208, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 932 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-208ENST00000505672 PRIM1P49642 420 aaKnown RBP25.08■■□□□ 1.61
CCND3-208ENST00000505672 RRS1Q15050 365 aaKnown RBP25.08■■□□□ 1.61
CCND3-208ENST00000505672 KCNQ4P56696 695 aa25.07■■□□□ 1.6
CCND3-208ENST00000505672 NBPF6Q5VWK0 638 aa25.07■■□□□ 1.6
CCND3-208ENST00000505672 NBPF4Q96M43 638 aa25.07■■□□□ 1.6
CCND3-208ENST00000505672 MEGF6O75095 1541 aa25.07■■□□□ 1.6
CCND3-208ENST00000505672 NSD2O96028 1365 aa25.06■■□□□ 1.6
CCND3-208ENST00000505672 SHANK3Q9BYB0 1731 aa25.06■■□□□ 1.6
CCND3-208ENST00000505672 ZCRB1Q8TBF4 217 aaKnown RBP25.06■■□□□ 1.6
CCND3-208ENST00000505672 ARXQ96QS3 562 aa25.06■■□□□ 1.6
CCND3-208ENST00000505672 GGNBP2Q9H3C7 697 aa25.06■■□□□ 1.6
CCND3-208ENST00000505672 SLC27A3Q5K4L6 730 aa25.05■■□□□ 1.6
CCND3-208ENST00000505672 SYTL4Q96C24 671 aaPredicted RBP25.04■■□□□ 1.6
CCND3-208ENST00000505672 USHBP1Q8N6Y0 703 aa25.02■■□□□ 1.6
CCND3-208ENST00000505672 PNPLA7Q6ZV29 1317 aa25.02■■□□□ 1.6
CCND3-208ENST00000505672 RTL1A6NKG5 1358 aa25.02■■□□□ 1.6
CCND3-208ENST00000505672 DOT1LQ8TEK3 1739 aa25.01■■□□□ 1.59
CCND3-208ENST00000505672 GOLGB1Q14789 3259 aaKnown RBP25.01■■□□□ 1.59
CCND3-208ENST00000505672 MAP3K5Q99683 1374 aa25■■□□□ 1.59
CCND3-208ENST00000505672 LY75O60449 1722 aa24.99■■□□□ 1.59
CCND3-208ENST00000505672 QSER1Q2KHR3 1735 aa24.99■■□□□ 1.59
CCND3-208ENST00000505672 HSP90AB2PQ58FF8 381 aa24.99■■□□□ 1.59
CCND3-208ENST00000505672 SLC16A10Q8TF71 515 aa24.99■■□□□ 1.59
CCND3-208ENST00000505672 CARD14Q9BXL6 1004 aa24.97■■□□□ 1.59
CCND3-208ENST00000505672 TFCP2L1Q9NZI6 479 aa24.97■■□□□ 1.59
CCND3-208ENST00000505672 TUBGCP6Q96RT7 1819 aa24.97■■□□□ 1.59
CCND3-208ENST00000505672 COL24A1Q17RW2 1714 aa24.97■■□□□ 1.59
CCND3-208ENST00000505672 ZNF784Q8NCA9 323 aaPredicted RBP24.96■■□□□ 1.59
CCND3-208ENST00000505672 NSD3Q9BZ95 1437 aa24.95■■□□□ 1.58
CCND3-208ENST00000505672 INSRP06213 1382 aa24.94■■□□□ 1.58
CCND3-208ENST00000505672 CGNL1Q0VF96 1302 aa24.94■■□□□ 1.58
CCND3-208ENST00000505672 EIF4G2P78344 907 aaKnown RBP eCLIP24.94■■□□□ 1.58
CCND3-208ENST00000505672 POLR3GLQ9BT43 218 aa24.93■■□□□ 1.58
CCND3-208ENST00000505672 CCNL1Q9UK58 526 aaPredicted RBP24.93■■□□□ 1.58
CCND3-208ENST00000505672 HSPA5P11021 654 aaKnown RBP24.92■■□□□ 1.58
CCND3-208ENST00000505672 RAPGEF4Q8WZA2 1011 aa24.92■■□□□ 1.58
CCND3-208ENST00000505672 TATP17735 454 aaPredicted RBP24.91■■□□□ 1.58
CCND3-208ENST00000505672 POLD1P28340 1107 aa24.9■■□□□ 1.58
CCND3-208ENST00000505672 FLT4P35916 1363 aa24.9■■□□□ 1.58
CCND3-208ENST00000505672 MAP2P11137 1827 aaKnown RBP24.89■■□□□ 1.58
CCND3-208ENST00000505672 SMG6Q86US8 1419 aaKnown RBP24.89■■□□□ 1.58
CCND3-208ENST00000505672 CHD4Q14839 1912 aa24.89■■□□□ 1.58
CCND3-208ENST00000505672 COL23A1Q86Y22 540 aaPredicted RBP24.89■■□□□ 1.58
CCND3-208ENST00000505672 EMILIN1Q9Y6C2 1016 aa24.89■■□□□ 1.58
CCND3-208ENST00000505672 KIF24Q5T7B8 1368 aa24.89■■□□□ 1.57
CCND3-208ENST00000505672 CYP27B1O15528 508 aa24.88■■□□□ 1.57
CCND3-208ENST00000505672 ANKRD26Q9UPS8 1709 aa24.88■■□□□ 1.57
CCND3-208ENST00000505672 KLHL34Q8N239 644 aa24.87■■□□□ 1.57
CCND3-208ENST00000505672 NLGN2Q8NFZ4 835 aa24.87■■□□□ 1.57
CCND3-208ENST00000505672 GPR162Q16538 588 aa24.86■■□□□ 1.57
CCND3-208ENST00000505672 PCDH11XQ9BZA7 1347 aa24.86■■□□□ 1.57
CCND3-208ENST00000505672 PCDH11YQ9BZA8 1340 aa24.86■■□□□ 1.57
CCND3-208ENST00000505672 MPRIPQ6WCQ1 1025 aa24.83■■□□□ 1.57
CCND3-208ENST00000505672 NCAPD2Q15021 1401 aa24.82■■□□□ 1.56
CCND3-208ENST00000505672 TOGARAM1Q9Y4F4 1720 aa24.81■■□□□ 1.56
CCND3-208ENST00000505672 MSH5O43196 834 aa24.81■■□□□ 1.56
CCND3-208ENST00000505672 PALLDQ8WX93 1383 aa24.8■■□□□ 1.56
CCND3-208ENST00000505672 C5P01031 1676 aa24.8■■□□□ 1.56
CCND3-208ENST00000505672 PPM1GO15355 546 aaPredicted RBP24.79■■□□□ 1.56
CCND3-208ENST00000505672 NKX1-1Q15270 411 aaPredicted RBP24.79■■□□□ 1.56
CCND3-208ENST00000505672 MSL1Q68DK7 614 aa24.79■■□□□ 1.56
CCND3-208ENST00000505672 WASHC2AQ641Q2 1341 aa24.79■■□□□ 1.56
CCND3-208ENST00000505672 ITGB4P16144 1822 aa24.79■■□□□ 1.56
CCND3-208ENST00000505672 TAF1LQ8IZX4 1826 aa24.79■■□□□ 1.56
CCND3-208ENST00000505672 PKD1L3Q7Z443 1732 aa24.78■■□□□ 1.56
CCND3-208ENST00000505672 AMIGO3Q86WK7 504 aa24.78■■□□□ 1.56
CCND3-208ENST00000505672 PIGBQ92521 554 aa24.78■■□□□ 1.56
CCND3-208ENST00000505672 PELP1Q8IZL8 1130 aaKnown RBP24.77■■□□□ 1.56
CCND3-208ENST00000505672 EYA1Q99502 592 aa24.77■■□□□ 1.56
CCND3-208ENST00000505672 YBX3P16989 372 aaKnown RBP eCLIP24.76■■□□□ 1.551e-6■□□□□ 11
CCND3-208ENST00000505672 POLKQ9UBT6 870 aa24.76■■□□□ 1.55
CCND3-208ENST00000505672 PANK3Q9H999 370 aa24.75■■□□□ 1.55
CCND3-208ENST00000505672 SMIM5Q71RC9 77 aa24.74■■□□□ 1.55
CCND3-208ENST00000505672 SMARCC1Q92922 1105 aaPredicted RBP24.73■■□□□ 1.55
CCND3-208ENST00000505672 FLAD1Q8NFF5 587 aa24.72■■□□□ 1.55
CCND3-208ENST00000505672 SPG7Q9UQ90 795 aa24.72■■□□□ 1.55
CCND3-208ENST00000505672 C4BP0C0L5 1744 aa24.72■■□□□ 1.55
CCND3-208ENST00000505672 C1QTNF8P60827 252 aa24.71■■□□□ 1.55
CCND3-208ENST00000505672 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.71■■□□□ 1.55
CCND3-208ENST00000505672 TNNT2P45379 298 aaPredicted RBP24.69■■□□□ 1.54
CCND3-208ENST00000505672 PHKG2P15735 406 aa24.68■■□□□ 1.54
CCND3-208ENST00000505672 HMGB2P26583 209 aaKnown RBP24.68■■□□□ 1.54
CCND3-208ENST00000505672 EIF4A2Q14240 407 aaKnown RBP24.68■■□□□ 1.54
CCND3-208ENST00000505672 LINC00116Q8NCU8 138 aa24.68■■□□□ 1.54
CCND3-208ENST00000505672 ASAP1Q9ULH1 1129 aa24.68■■□□□ 1.54
CCND3-208ENST00000505672 CD2APQ9Y5K6 639 aa24.68■■□□□ 1.54
CCND3-208ENST00000505672 UBR3Q6ZT12 1888 aa24.68■■□□□ 1.54
CCND3-208ENST00000505672 LOC102724428A0A0B4J2F2 783 aa24.67■■□□□ 1.54
CCND3-208ENST00000505672 GRIN3BO60391 1043 aa24.67■■□□□ 1.54
CCND3-208ENST00000505672 SIK1P57059 783 aa24.67■■□□□ 1.54
CCND3-208ENST00000505672 AK7Q96M32 723 aa24.67■■□□□ 1.54
CCND3-208ENST00000505672 ITPK1Q13572 414 aa24.66■■□□□ 1.54
CCND3-208ENST00000505672 IFNL2Q8IZJ0 200 aa24.66■■□□□ 1.54
CCND3-208ENST00000505672 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.65■■□□□ 1.54
CCND3-208ENST00000505672 PHF14O94880 888 aa24.65■■□□□ 1.54
CCND3-208ENST00000505672 TMOD3Q9NYL9 352 aa24.65■■□□□ 1.54
CCND3-208ENST00000505672 ATG3Q9NT62 314 aa24.64■■□□□ 1.54
CCND3-208ENST00000505672 KIF7Q2M1P5 1343 aa24.63■■□□□ 1.53
CCND3-208ENST00000505672 SENP3-EIF4A1A0A087X0R7 540 aa24.61■■□□□ 1.53
CCND3-208ENST00000505672 SSFA2P28290 1259 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms