RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 BCL2L12Q9HB09 334 aa16.24■□□□□ 0.19
LETM1-203ENST00000505551 TMEM63CQ9P1W3 806 aa16.23■□□□□ 0.19
LETM1-203ENST00000505551 FBLN1P23142 703 aa16.23■□□□□ 0.19
LETM1-203ENST00000505551 CGNQ9P2M7 1197 aaKnown RBP16.23■□□□□ 0.19
LETM1-203ENST00000505551 SBNO2Q9Y2G9 1366 aa16.22■□□□□ 0.19
LETM1-203ENST00000505551 PDCL2Q8N4E4 241 aa16.22■□□□□ 0.19
LETM1-203ENST00000505551 PTMAP06454 111 aaKnown RBP16.22■□□□□ 0.19
LETM1-203ENST00000505551 CDK19Q9BWU1 502 aa16.22■□□□□ 0.19
LETM1-203ENST00000505551 SYCE3A1L190 88 aa16.21■□□□□ 0.19
LETM1-203ENST00000505551 MYCNP04198 464 aaPredicted RBP16.21■□□□□ 0.19
LETM1-203ENST00000505551 NOLC1Q14978 699 aaKnown RBP eCLIP16.21■□□□□ 0.19
LETM1-203ENST00000505551 GRIPAP1Q4V328 841 aa16.21■□□□□ 0.19
LETM1-203ENST00000505551 TXNDC2Q86VQ3 553 aa16.21■□□□□ 0.19
LETM1-203ENST00000505551 CABP1Q9NZU7 370 aa16.21■□□□□ 0.19
LETM1-203ENST00000505551 DDX19BQ9UMR2 479 aa16.21■□□□□ 0.19
LETM1-203ENST00000505551 PREX1Q8TCU6 1659 aa16.21■□□□□ 0.19
LETM1-203ENST00000505551 QRICH2Q9H0J4 1663 aa16.21■□□□□ 0.19
LETM1-203ENST00000505551 SETBP1Q9Y6X0 1596 aa16.21■□□□□ 0.19
LETM1-203ENST00000505551 SOX12O15370 315 aa16.21■□□□□ 0.19
LETM1-203ENST00000505551 IRX3P78415 501 aaPredicted RBP16.21■□□□□ 0.19
LETM1-203ENST00000505551 SPTLC3Q9NUV7 552 aa16.21■□□□□ 0.19
LETM1-203ENST00000505551 SPDYE4A6NLX3 237 aa16.2■□□□□ 0.18
LETM1-203ENST00000505551 PRPF40AO75400 957 aaKnown RBP16.2■□□□□ 0.18
LETM1-203ENST00000505551 FKBP5Q13451 457 aaPredicted RBP16.2■□□□□ 0.18
LETM1-203ENST00000505551 ANKRD7Q92527 254 aa16.2■□□□□ 0.18
LETM1-203ENST00000505551 RUNDC1Q96C34 613 aa16.2■□□□□ 0.18
LETM1-203ENST00000505551 CCDC27Q2M243 656 aa16.2■□□□□ 0.18
LETM1-203ENST00000505551 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.2■□□□□ 0.18
LETM1-203ENST00000505551 CLTCQ00610 1675 aaKnown RBP16.19■□□□□ 0.18
LETM1-203ENST00000505551 TMEM131LA2VDJ0 1609 aa16.19■□□□□ 0.18
LETM1-203ENST00000505551 YTHDC2Q9H6S0 1430 aaKnown RBP16.19■□□□□ 0.18
LETM1-203ENST00000505551 NCKAP5LQ9HCH0 1330 aa16.19■□□□□ 0.18
LETM1-203ENST00000505551 NUTM2FA1L443 756 aa16.18■□□□□ 0.18
LETM1-203ENST00000505551 PKP1Q13835 747 aa16.18■□□□□ 0.18
LETM1-203ENST00000505551 TBC1D9Q6ZT07 1266 aa16.18■□□□□ 0.18
LETM1-203ENST00000505551 FEZ1Q99689 392 aa16.18■□□□□ 0.18
LETM1-203ENST00000505551 HDAC5Q9UQL6 1122 aa16.18■□□□□ 0.18
LETM1-203ENST00000505551 CHD1LQ86WJ1 897 aa16.18■□□□□ 0.18
LETM1-203ENST00000505551 TCP11L2Q8N4U5 519 aa16.18■□□□□ 0.18
LETM1-203ENST00000505551 LNPKQ9C0E8 428 aa16.18■□□□□ 0.18
LETM1-203ENST00000505551 REREQ9P2R6 1566 aa16.18■□□□□ 0.18
LETM1-203ENST00000505551 TULP4Q9NRJ4 1543 aa16.18■□□□□ 0.18
LETM1-203ENST00000505551 FAM177BA6PVY3 158 aa16.18■□□□□ 0.18
LETM1-203ENST00000505551 CT47B1P0C2W7 299 aaPredicted RBP16.18■□□□□ 0.18
LETM1-203ENST00000505551 TRIM27P14373 513 aa16.18■□□□□ 0.18
LETM1-203ENST00000505551 RABEP1Q15276 862 aa16.18■□□□□ 0.18
LETM1-203ENST00000505551 CWC22Q9HCG8 908 aaKnown RBP16.18■□□□□ 0.18
LETM1-203ENST00000505551 RNF214Q8ND24 703 aa16.17■□□□□ 0.18
LETM1-203ENST00000505551 U2AF2P26368 475 aaKnown RBP eCLIP16.17■□□□□ 0.18
LETM1-203ENST00000505551 ZBTB40Q9NUA8 1239 aa16.17■□□□□ 0.18
LETM1-203ENST00000505551 RIMS2Q9UQ26 1411 aa16.16■□□□□ 0.18
LETM1-203ENST00000505551 A0A1W2PP64 1363 aa16.16■□□□□ 0.18
LETM1-203ENST00000505551 MBD3O95983 291 aa16.16■□□□□ 0.18
LETM1-203ENST00000505551 GABPB1Q06547 395 aaPredicted RBP16.16■□□□□ 0.18
LETM1-203ENST00000505551 PLCD4Q9BRC7 762 aa16.16■□□□□ 0.18
LETM1-203ENST00000505551 NSFL1CQ9UNZ2 370 aaKnown RBP16.16■□□□□ 0.18
LETM1-203ENST00000505551 ITPRIPQ8IWB1 547 aa16.16■□□□□ 0.18
LETM1-203ENST00000505551 ZC3H13Q5T200 1668 aaKnown RBP16.16■□□□□ 0.18
LETM1-203ENST00000505551 U2AF1L5P0DN76 240 aaPredicted RBP16.15■□□□□ 0.18
LETM1-203ENST00000505551 U2AF1Q01081 240 aaKnown RBP eCLIP16.15■□□□□ 0.18
LETM1-203ENST00000505551 ZNF771Q7L3S4 317 aaPredicted RBP16.15■□□□□ 0.18
LETM1-203ENST00000505551 TSPY26PQ9H489 355 aa16.15■□□□□ 0.18
LETM1-203ENST00000505551 ZDHHC9Q9Y397 364 aa16.15■□□□□ 0.18
LETM1-203ENST00000505551 U2SURPO15042 1029 aaKnown RBP16.15■□□□□ 0.18
LETM1-203ENST00000505551 SLC20A2Q08357 652 aa16.15■□□□□ 0.18
LETM1-203ENST00000505551 OGFRQ9NZT2 677 aa16.15■□□□□ 0.18
LETM1-203ENST00000505551 A2ML1A8K2U0 1454 aa16.15■□□□□ 0.18
LETM1-203ENST00000505551 MYO3AQ8NEV4 1616 aa16.14■□□□□ 0.17
LETM1-203ENST00000505551 CTIFO43310 598 aaKnown RBP16.14■□□□□ 0.17
LETM1-203ENST00000505551 KIF13AQ9H1H9 1805 aa16.13■□□□□ 0.17
LETM1-203ENST00000505551 ZFYVE9O95405 1425 aa16.13■□□□□ 0.17
LETM1-203ENST00000505551 FYB1O15117 783 aa16.13■□□□□ 0.17
LETM1-203ENST00000505551 IRX5P78411 483 aaPredicted RBP16.13■□□□□ 0.17
LETM1-203ENST00000505551 ANKRD36BQ8N2N9 1353 aa16.13■□□□□ 0.17
LETM1-203ENST00000505551 ATF7IPQ6VMQ6 1270 aa16.13■□□□□ 0.17
LETM1-203ENST00000505551 METP08581 1390 aa16.13■□□□□ 0.17
LETM1-203ENST00000505551 SLC26A8Q96RN1 970 aa16.12■□□□□ 0.17
LETM1-203ENST00000505551 ARHGEF28Q8N1W1 1705 aaKnown RBP16.12■□□□□ 0.17
LETM1-203ENST00000505551 ALKQ9UM73 1620 aa16.12■□□□□ 0.17
LETM1-203ENST00000505551 CLGNO14967 610 aa16.12■□□□□ 0.17
LETM1-203ENST00000505551 UVSSAQ2YD98 709 aa16.12■□□□□ 0.17
LETM1-203ENST00000505551 DIAPH3Q9NSV4 1193 aa16.12■□□□□ 0.17
LETM1-203ENST00000505551 SMC4Q9NTJ3 1288 aa16.12■□□□□ 0.17
LETM1-203ENST00000505551 TERF2IPQ9NYB0 399 aa16.12■□□□□ 0.17
LETM1-203ENST00000505551 PTPRMP28827 1452 aa16.12■□□□□ 0.17
LETM1-203ENST00000505551 CLSTN1O94985 981 aa16.11■□□□□ 0.17
LETM1-203ENST00000505551 C17orf53Q8N3J3 647 aaPredicted RBP16.11■□□□□ 0.17
LETM1-203ENST00000505551 CFAP53Q96M91 514 aa16.11■□□□□ 0.17
LETM1-203ENST00000505551 ADGRB2O60241 1585 aa16.11■□□□□ 0.17
LETM1-203ENST00000505551 CDC45O75419 566 aa16.1■□□□□ 0.17
LETM1-203ENST00000505551 TMEM57Q8N5G2 664 aa16.1■□□□□ 0.17
LETM1-203ENST00000505551 RIOK3O14730 519 aaKnown RBP16.1■□□□□ 0.17
LETM1-203ENST00000505551 APPP05067 770 aa16.1■□□□□ 0.17
LETM1-203ENST00000505551 HDGFL2Q7Z4V5 671 aaPredicted RBP16.1■□□□□ 0.17
LETM1-203ENST00000505551 ZRANB1Q9UGI0 708 aa16.1■□□□□ 0.17
LETM1-203ENST00000505551 AGLP35573 1532 aa16.1■□□□□ 0.17
LETM1-203ENST00000505551 SLFN14P0C7P3 912 aa16.1■□□□□ 0.17
LETM1-203ENST00000505551 FAM184AQ8NB25 1140 aa16.1■□□□□ 0.17
LETM1-203ENST00000505551 TTC12Q9H892 705 aaPredicted RBP16.1■□□□□ 0.17
LETM1-203ENST00000505551 LTKP29376 864 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms