RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 KLHL34Q8N239 644 aa23.85■■□□□ 1.41
DDR1-257ENST00000505534 COG3Q96JB2 828 aa23.85■■□□□ 1.41
DDR1-257ENST00000505534 HOXC9P31274 260 aa23.84■■□□□ 1.41
DDR1-257ENST00000505534 SHANK3Q9BYB0 1731 aa23.84■■□□□ 1.41
DDR1-257ENST00000505534 MAP3K19Q56UN5 1328 aa23.84■■□□□ 1.41
DDR1-257ENST00000505534 AMPHP49418 695 aa23.83■■□□□ 1.41
DDR1-257ENST00000505534 KCNQ4P56696 695 aa23.83■■□□□ 1.41
DDR1-257ENST00000505534 ZCRB1Q8TBF4 217 aaKnown RBP23.83■■□□□ 1.41
DDR1-257ENST00000505534 NSD2O96028 1365 aa23.81■■□□□ 1.4
DDR1-257ENST00000505534 GOLGB1Q14789 3259 aaKnown RBP23.81■■□□□ 1.4
DDR1-257ENST00000505534 SLC24A1O60721 1099 aa23.8■■□□□ 1.4
DDR1-257ENST00000505534 PELP1Q8IZL8 1130 aaKnown RBP23.8■■□□□ 1.4
DDR1-257ENST00000505534 CCNL1Q9UK58 526 aaPredicted RBP23.79■■□□□ 1.4
DDR1-257ENST00000505534 FBLN1P23142 703 aa23.78■■□□□ 1.4
DDR1-257ENST00000505534 NLGN2Q8NFZ4 835 aa23.78■■□□□ 1.4
DDR1-257ENST00000505534 TESK2Q96S53 571 aa23.78■■□□□ 1.4
DDR1-257ENST00000505534 TONSLQ96HA7 1378 aa23.78■■□□□ 1.4
DDR1-257ENST00000505534 MEGF6O75095 1541 aa23.77■■□□□ 1.4
DDR1-257ENST00000505534 CGNL1Q0VF96 1302 aa23.77■■□□□ 1.4
DDR1-257ENST00000505534 GIGYF1O75420 1035 aaPredicted RBP23.76■■□□□ 1.39
DDR1-257ENST00000505534 RTL1A6NKG5 1358 aa23.76■■□□□ 1.39
DDR1-257ENST00000505534 USP47Q96K76 1375 aa23.76■■□□□ 1.39
DDR1-257ENST00000505534 ST20-MTHFSA0A0A6YYL1 179 aa23.75■■□□□ 1.39
DDR1-257ENST00000505534 GRIN3BO60391 1043 aa23.75■■□□□ 1.39
DDR1-257ENST00000505534 MSH5O43196 834 aa23.74■■□□□ 1.39
DDR1-257ENST00000505534 COL23A1Q86Y22 540 aaPredicted RBP23.74■■□□□ 1.39
DDR1-257ENST00000505534 HMGB2P26583 209 aaKnown RBP23.73■■□□□ 1.39
DDR1-257ENST00000505534 NBPF6Q5VWK0 638 aa23.73■■□□□ 1.39
DDR1-257ENST00000505534 NBPF4Q96M43 638 aa23.73■■□□□ 1.39
DDR1-257ENST00000505534 RAPGEF4Q8WZA2 1011 aa23.72■■□□□ 1.39
DDR1-257ENST00000505534 RRS1Q15050 365 aaKnown RBP23.71■■□□□ 1.39
DDR1-257ENST00000505534 YBX3P16989 372 aaKnown RBP eCLIP23.7■■□□□ 1.38
DDR1-257ENST00000505534 TAF1LQ8IZX4 1826 aa23.7■■□□□ 1.38
DDR1-257ENST00000505534 C5P01031 1676 aa23.7■■□□□ 1.38
DDR1-257ENST00000505534 SMG6Q86US8 1419 aaKnown RBP23.69■■□□□ 1.38
DDR1-257ENST00000505534 FYB1O15117 783 aa23.69■■□□□ 1.38
DDR1-257ENST00000505534 TATP17735 454 aaPredicted RBP23.69■■□□□ 1.38
DDR1-257ENST00000505534 USHBP1Q8N6Y0 703 aa23.68■■□□□ 1.38
DDR1-257ENST00000505534 FLAD1Q8NFF5 587 aa23.68■■□□□ 1.38
DDR1-257ENST00000505534 GGNBP2Q9H3C7 697 aa23.67■■□□□ 1.38
DDR1-257ENST00000505534 MSL1Q68DK7 614 aa23.66■■□□□ 1.38
DDR1-257ENST00000505534 CD2APQ9Y5K6 639 aa23.66■■□□□ 1.38
DDR1-257ENST00000505534 PCDH11XQ9BZA7 1347 aa23.65■■□□□ 1.38
DDR1-257ENST00000505534 PCDH11YQ9BZA8 1340 aa23.65■■□□□ 1.38
DDR1-257ENST00000505534 ITGB4P16144 1822 aa23.65■■□□□ 1.38
DDR1-257ENST00000505534 INSRP06213 1382 aa23.65■■□□□ 1.38
DDR1-257ENST00000505534 HSP90AB2PQ58FF8 381 aa23.63■■□□□ 1.37
DDR1-257ENST00000505534 PALLDQ8WX93 1383 aa23.63■■□□□ 1.37
DDR1-257ENST00000505534 KIF20BQ96Q89 1820 aa23.62■■□□□ 1.37
DDR1-257ENST00000505534 TMF1P82094 1093 aa23.62■■□□□ 1.37
DDR1-257ENST00000505534 MPRIPQ6WCQ1 1025 aa23.62■■□□□ 1.37
DDR1-257ENST00000505534 KIF24Q5T7B8 1368 aa23.62■■□□□ 1.37
DDR1-257ENST00000505534 SMARCC1Q92922 1105 aaPredicted RBP23.61■■□□□ 1.37
DDR1-257ENST00000505534 FLT4P35916 1363 aa23.61■■□□□ 1.37
DDR1-257ENST00000505534 CYP27B1O15528 508 aa23.6■■□□□ 1.37
DDR1-257ENST00000505534 C4BP0C0L5 1744 aa23.59■■□□□ 1.37
DDR1-257ENST00000505534 CEP350Q5VT06 3117 aa23.58■■□□□ 1.37
DDR1-257ENST00000505534 UBR3Q6ZT12 1888 aa23.58■■□□□ 1.37
DDR1-257ENST00000505534 TRIM26Q12899 539 aaPredicted RBP23.58■■□□□ 1.37
DDR1-257ENST00000505534 ATP10DQ9P241 1426 aa23.58■■□□□ 1.36
DDR1-257ENST00000505534 TOGARAM1Q9Y4F4 1720 aa23.57■■□□□ 1.36
DDR1-257ENST00000505534 AK7Q96M32 723 aa23.57■■□□□ 1.36
DDR1-257ENST00000505534 PKD1L3Q7Z443 1732 aa23.56■■□□□ 1.36
DDR1-257ENST00000505534 CDCA8Q53HL2 280 aa23.55■■□□□ 1.36
DDR1-257ENST00000505534 NSD3Q9BZ95 1437 aa23.54■■□□□ 1.36
DDR1-257ENST00000505534 GPBP1L1Q9HC44 474 aaPredicted RBP23.54■■□□□ 1.36
DDR1-257ENST00000505534 NKX1-1Q15270 411 aaPredicted RBP23.53■■□□□ 1.36
DDR1-257ENST00000505534 PIGBQ92521 554 aa23.53■■□□□ 1.36
DDR1-257ENST00000505534 MAP2P11137 1827 aaKnown RBP23.53■■□□□ 1.36
DDR1-257ENST00000505534 ADCY9O60503 1353 aa23.52■■□□□ 1.36
DDR1-257ENST00000505534 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.51■■□□□ 1.35
DDR1-257ENST00000505534 SSFA2P28290 1259 aa23.51■■□□□ 1.35
DDR1-257ENST00000505534 IFFO2Q5TF58 517 aa23.51■■□□□ 1.35
DDR1-257ENST00000505534 AMIGO3Q86WK7 504 aa23.51■■□□□ 1.35
DDR1-257ENST00000505534 SPG7Q9UQ90 795 aa23.51■■□□□ 1.35
DDR1-257ENST00000505534 EMILIN1Q9Y6C2 1016 aa23.51■■□□□ 1.35
DDR1-257ENST00000505534 NCAPD2Q15021 1401 aa23.5■■□□□ 1.35
DDR1-257ENST00000505534 PHF14O94880 888 aa23.5■■□□□ 1.35
DDR1-257ENST00000505534 LOC102724428A0A0B4J2F2 783 aa23.49■■□□□ 1.35
DDR1-257ENST00000505534 SIK1P57059 783 aa23.49■■□□□ 1.35
DDR1-257ENST00000505534 IGSF1Q8N6C5 1336 aa23.49■■□□□ 1.35
DDR1-257ENST00000505534 CARD14Q9BXL6 1004 aa23.48■■□□□ 1.35
DDR1-257ENST00000505534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.48■■□□□ 1.35
DDR1-257ENST00000505534 SMIM5Q71RC9 77 aa23.47■■□□□ 1.35
DDR1-257ENST00000505534 ANKRD26Q9UPS8 1709 aa23.47■■□□□ 1.35
DDR1-257ENST00000505534 PPM1GO15355 546 aaPredicted RBP23.46■■□□□ 1.35
DDR1-257ENST00000505534 LINC00116Q8NCU8 138 aa23.46■■□□□ 1.35
DDR1-257ENST00000505534 WASHC2AQ641Q2 1341 aa23.45■■□□□ 1.34
DDR1-257ENST00000505534 TMOD3Q9NYL9 352 aa23.45■■□□□ 1.34
DDR1-257ENST00000505534 HSPA6P17066 643 aa23.44■■□□□ 1.34
DDR1-257ENST00000505534 ZNF526Q8TF50 670 aaPredicted RBP23.44■■□□□ 1.34
DDR1-257ENST00000505534 EYA1Q99502 592 aa23.43■■□□□ 1.34
DDR1-257ENST00000505534 ASAP1Q9ULH1 1129 aa23.43■■□□□ 1.34
DDR1-257ENST00000505534 GNPATO15228 680 aa23.42■■□□□ 1.34
DDR1-257ENST00000505534 ATP6V1AP38606 617 aa23.42■■□□□ 1.34
DDR1-257ENST00000505534 IFNL2Q8IZJ0 200 aa23.42■■□□□ 1.34
DDR1-257ENST00000505534 WWC3Q9ULE0 1092 aa23.42■■□□□ 1.34
DDR1-257ENST00000505534 ITPK1Q13572 414 aa23.41■■□□□ 1.34
DDR1-257ENST00000505534 KIF13BQ9NQT8 1826 aa23.4■■□□□ 1.34
DDR1-257ENST00000505534 PHKG2P15735 406 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms