RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 HSP90AB2PQ58FF8 381 aa17.03■□□□□ 0.32
SNHG4-202ENST00000505522 SYTL4Q96C24 671 aaPredicted RBP17.03■□□□□ 0.32
SNHG4-202ENST00000505522 SGIP1Q9BQI5 828 aa17.03■□□□□ 0.32
SNHG4-202ENST00000505522 MTFR1LQ9H019 292 aa17.03■□□□□ 0.32
SNHG4-202ENST00000505522 NSD2O96028 1365 aa17.02■□□□□ 0.32
SNHG4-202ENST00000505522 TIMELESSQ9UNS1 1208 aa17.02■□□□□ 0.32
SNHG4-202ENST00000505522 KCNQ4P56696 695 aa17.01■□□□□ 0.31
SNHG4-202ENST00000505522 PCGF6Q9BYE7 350 aa17.01■□□□□ 0.31
SNHG4-202ENST00000505522 SMG6Q86US8 1419 aaKnown RBP17.01■□□□□ 0.31
SNHG4-202ENST00000505522 NSD3Q9BZ95 1437 aa17.01■□□□□ 0.31
SNHG4-202ENST00000505522 INSRP06213 1382 aa17.01■□□□□ 0.31
SNHG4-202ENST00000505522 YY1P25490 414 aa17■□□□□ 0.31
SNHG4-202ENST00000505522 SLC27A3Q5K4L6 730 aa17■□□□□ 0.31
SNHG4-202ENST00000505522 AKT1S1Q96B36 256 aa17■□□□□ 0.31
SNHG4-202ENST00000505522 FHDC1Q9C0D6 1143 aaPredicted RBP17■□□□□ 0.31
SNHG4-202ENST00000505522 FLT4P35916 1363 aa17■□□□□ 0.31
SNHG4-202ENST00000505522 LY75O60449 1722 aa16.99■□□□□ 0.31
SNHG4-202ENST00000505522 DCAF8L1A6NGE4 600 aa16.99■□□□□ 0.31
SNHG4-202ENST00000505522 EMILIN1Q9Y6C2 1016 aa16.99■□□□□ 0.31
SNHG4-202ENST00000505522 CGNL1Q0VF96 1302 aa16.98■□□□□ 0.31
SNHG4-202ENST00000505522 CLSPNQ9HAW4 1339 aa16.98■□□□□ 0.31
SNHG4-202ENST00000505522 RAPGEF4Q8WZA2 1011 aa16.98■□□□□ 0.31
SNHG4-202ENST00000505522 SYT17Q9BSW7 474 aa16.98■□□□□ 0.31
SNHG4-202ENST00000505522 KIF24Q5T7B8 1368 aa16.98■□□□□ 0.31
SNHG4-202ENST00000505522 TATP17735 454 aaPredicted RBP16.97■□□□□ 0.31
SNHG4-202ENST00000505522 QSER1Q2KHR3 1735 aa16.96■□□□□ 0.31
SNHG4-202ENST00000505522 TUBGCP6Q96RT7 1819 aa16.96■□□□□ 0.3
SNHG4-202ENST00000505522 PNPLA7Q6ZV29 1317 aa16.96■□□□□ 0.3
SNHG4-202ENST00000505522 ARXQ96QS3 562 aa16.95■□□□□ 0.3
SNHG4-202ENST00000505522 ANKRD26Q9UPS8 1709 aa16.94■□□□□ 0.3
SNHG4-202ENST00000505522 TFCP2L1Q9NZI6 479 aa16.94■□□□□ 0.3
SNHG4-202ENST00000505522 PCDH11XQ9BZA7 1347 aa16.94■□□□□ 0.3
SNHG4-202ENST00000505522 PCDH11YQ9BZA8 1340 aa16.94■□□□□ 0.3
SNHG4-202ENST00000505522 PPM1GO15355 546 aaPredicted RBP16.93■□□□□ 0.3
SNHG4-202ENST00000505522 SLC16A10Q8TF71 515 aa16.93■□□□□ 0.3
SNHG4-202ENST00000505522 CCNL1Q9UK58 526 aaPredicted RBP16.93■□□□□ 0.3
SNHG4-202ENST00000505522 CYP27B1O15528 508 aa16.92■□□□□ 0.3
SNHG4-202ENST00000505522 POLR3GLQ9BT43 218 aa16.92■□□□□ 0.3
SNHG4-202ENST00000505522 COL24A1Q17RW2 1714 aa16.91■□□□□ 0.3
SNHG4-202ENST00000505522 PKD1L3Q7Z443 1732 aa16.91■□□□□ 0.3
SNHG4-202ENST00000505522 NCAPD2Q15021 1401 aa16.91■□□□□ 0.3
SNHG4-202ENST00000505522 MAP3K5Q99683 1374 aa16.9■□□□□ 0.3
SNHG4-202ENST00000505522 TOGARAM1Q9Y4F4 1720 aa16.9■□□□□ 0.3
SNHG4-202ENST00000505522 MAP2P11137 1827 aaKnown RBP16.9■□□□□ 0.3
SNHG4-202ENST00000505522 WASHC2AQ641Q2 1341 aa16.9■□□□□ 0.3
SNHG4-202ENST00000505522 UTRNP46939 3433 aa16.89■□□□□ 0.29
SNHG4-202ENST00000505522 MPRIPQ6WCQ1 1025 aa16.89■□□□□ 0.29
SNHG4-202ENST00000505522 POLKQ9UBT6 870 aa16.89■□□□□ 0.29
SNHG4-202ENST00000505522 HSPA5P11021 654 aaKnown RBP16.88■□□□□ 0.29
SNHG4-202ENST00000505522 POLD1P28340 1107 aa16.88■□□□□ 0.29
SNHG4-202ENST00000505522 EYA1Q99502 592 aa16.88■□□□□ 0.29
SNHG4-202ENST00000505522 PALLDQ8WX93 1383 aa16.88■□□□□ 0.29
SNHG4-202ENST00000505522 C5P01031 1676 aa16.88■□□□□ 0.29
SNHG4-202ENST00000505522 ITGB4P16144 1822 aa16.87■□□□□ 0.29
SNHG4-202ENST00000505522 EIF4G2P78344 907 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNHG4-202ENST00000505522 COL23A1Q86Y22 540 aaPredicted RBP16.87■□□□□ 0.29
SNHG4-202ENST00000505522 TNNT2P45379 298 aaPredicted RBP16.86■□□□□ 0.29
SNHG4-202ENST00000505522 KLHL34Q8N239 644 aa16.86■□□□□ 0.29
SNHG4-202ENST00000505522 TAF1LQ8IZX4 1826 aa16.85■□□□□ 0.29
SNHG4-202ENST00000505522 MSH5O43196 834 aa16.85■□□□□ 0.29
SNHG4-202ENST00000505522 NKX1-1Q15270 411 aaPredicted RBP16.85■□□□□ 0.29
SNHG4-202ENST00000505522 SPG7Q9UQ90 795 aa16.85■□□□□ 0.29
SNHG4-202ENST00000505522 EIF4A2Q14240 407 aaKnown RBP16.84■□□□□ 0.29
SNHG4-202ENST00000505522 PIGBQ92521 554 aa16.84■□□□□ 0.29
SNHG4-202ENST00000505522 PANK3Q9H999 370 aa16.84■□□□□ 0.29
SNHG4-202ENST00000505522 CCER1Q8TC90 406 aaPredicted RBP16.83■□□□□ 0.28
SNHG4-202ENST00000505522 MSL1Q68DK7 614 aa16.82■□□□□ 0.28
SNHG4-202ENST00000505522 NLGN2Q8NFZ4 835 aa16.82■□□□□ 0.28
SNHG4-202ENST00000505522 SMARCC1Q92922 1105 aaPredicted RBP16.82■□□□□ 0.28
SNHG4-202ENST00000505522 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNHG4-202ENST00000505522 C4BP0C0L5 1744 aa16.82■□□□□ 0.28
SNHG4-202ENST00000505522 GPR162Q16538 588 aa16.81■□□□□ 0.28
SNHG4-202ENST00000505522 ZNF784Q8NCA9 323 aaPredicted RBP16.81■□□□□ 0.28
SNHG4-202ENST00000505522 CHD4Q14839 1912 aa16.8■□□□□ 0.28
SNHG4-202ENST00000505522 PHKG2P15735 406 aa16.8■□□□□ 0.28
SNHG4-202ENST00000505522 AMIGO3Q86WK7 504 aa16.8■□□□□ 0.28
SNHG4-202ENST00000505522 GOLGB1Q14789 3259 aaKnown RBP16.8■□□□□ 0.28
SNHG4-202ENST00000505522 IFNL2Q8IZJ0 200 aa16.79■□□□□ 0.28
SNHG4-202ENST00000505522 IGSF1Q8N6C5 1336 aa16.78■□□□□ 0.28
SNHG4-202ENST00000505522 SMIM5Q71RC9 77 aa16.78■□□□□ 0.28
SNHG4-202ENST00000505522 PELP1Q8IZL8 1130 aaKnown RBP16.78■□□□□ 0.28
SNHG4-202ENST00000505522 FLAD1Q8NFF5 587 aa16.78■□□□□ 0.28
SNHG4-202ENST00000505522 AK7Q96M32 723 aa16.78■□□□□ 0.28
SNHG4-202ENST00000505522 TMOD3Q9NYL9 352 aa16.78■□□□□ 0.28
SNHG4-202ENST00000505522 ASAP1Q9ULH1 1129 aa16.78■□□□□ 0.28
SNHG4-202ENST00000505522 LOC102724428A0A0B4J2F2 783 aa16.77■□□□□ 0.28
SNHG4-202ENST00000505522 HMGB2P26583 209 aaKnown RBP16.77■□□□□ 0.28
SNHG4-202ENST00000505522 SIK1P57059 783 aa16.77■□□□□ 0.28
SNHG4-202ENST00000505522 LINC00116Q8NCU8 138 aa16.77■□□□□ 0.28
SNHG4-202ENST00000505522 UBR3Q6ZT12 1888 aa16.77■□□□□ 0.27
SNHG4-202ENST00000505522 PLEKHG2Q9H7P9 1386 aa16.76■□□□□ 0.27
SNHG4-202ENST00000505522 PHF14O94880 888 aa16.75■□□□□ 0.27
SNHG4-202ENST00000505522 ITPK1Q13572 414 aa16.75■□□□□ 0.27
SNHG4-202ENST00000505522 MORC1Q86VD1 984 aa16.75■□□□□ 0.27
SNHG4-202ENST00000505522 ATG3Q9NT62 314 aa16.75■□□□□ 0.27
SNHG4-202ENST00000505522 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.74■□□□□ 0.27
SNHG4-202ENST00000505522 YBX3P16989 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
SNHG4-202ENST00000505522 ATP6V1AP38606 617 aa16.73■□□□□ 0.27
SNHG4-202ENST00000505522 SSFA2P28290 1259 aa16.72■□□□□ 0.27
SNHG4-202ENST00000505522 AEBP1Q8IUX7 1158 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms