RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 NOP58Q9Y2X3 529 aaKnown RBP14.35□□□□□ -0.11
NFKB1-205ENST00000505458 PROSER2Q86WR7 435 aaPredicted RBP14.35□□□□□ -0.11
NFKB1-205ENST00000505458 ZBTB40Q9NUA8 1239 aa14.35□□□□□ -0.11
NFKB1-205ENST00000505458 PCDHB15Q9Y5E8 787 aa14.34□□□□□ -0.11
NFKB1-205ENST00000505458 MAP3K5Q99683 1374 aa14.34□□□□□ -0.11
NFKB1-205ENST00000505458 C1orf167Q5SNV9 1468 aa14.33□□□□□ -0.11
NFKB1-205ENST00000505458 TMEM57Q8N5G2 664 aa14.33□□□□□ -0.11
NFKB1-205ENST00000505458 THUMPD2Q9BTF0 503 aaKnown RBP14.33□□□□□ -0.12
NFKB1-205ENST00000505458 USP19O94966 1318 aa14.33□□□□□ -0.12
NFKB1-205ENST00000505458 CAMTA1Q9Y6Y1 1673 aa14.32□□□□□ -0.12
NFKB1-205ENST00000505458 OVOS2A0A0G2JMS6 1433 aa14.32□□□□□ -0.12
NFKB1-205ENST00000505458 NCAPD2Q15021 1401 aa14.32□□□□□ -0.12
NFKB1-205ENST00000505458 GNAT3A8MTJ3 354 aa14.32□□□□□ -0.12
NFKB1-205ENST00000505458 ZBTB47Q9UFB7 747 aaPredicted RBP14.32□□□□□ -0.12
NFKB1-205ENST00000505458 SOX12O15370 315 aa14.32□□□□□ -0.12
NFKB1-205ENST00000505458 EIF5BO60841 1220 aaKnown RBP14.32□□□□□ -0.12
NFKB1-205ENST00000505458 RGS3P49796 1198 aa14.31□□□□□ -0.12
NFKB1-205ENST00000505458 SMC5Q8IY18 1101 aa14.31□□□□□ -0.12
NFKB1-205ENST00000505458 MTHFSDQ2M296 383 aaKnown RBP14.31□□□□□ -0.12
NFKB1-205ENST00000505458 GCC1Q96CN9 775 aa14.31□□□□□ -0.12
NFKB1-205ENST00000505458 ALS2Q96Q42 1657 aa14.3□□□□□ -0.12
NFKB1-205ENST00000505458 TNNQ9UQP3 1299 aa14.3□□□□□ -0.12
NFKB1-205ENST00000505458 FAM83GA6ND36 823 aa14.3□□□□□ -0.12
NFKB1-205ENST00000505458 C8orf34Q49A92 452 aa14.3□□□□□ -0.12
NFKB1-205ENST00000505458 C8orf58Q8NAV2 365 aa14.3□□□□□ -0.12
NFKB1-205ENST00000505458 ATF3P18847 181 aa14.29□□□□□ -0.12
NFKB1-205ENST00000505458 PDZRN3Q9UPQ7 1066 aa14.29□□□□□ -0.12
NFKB1-205ENST00000505458 FAM208AQ9UK61 1670 aaKnown RBP14.29□□□□□ -0.12
NFKB1-205ENST00000505458 LMO7Q8WWI1 1683 aa14.29□□□□□ -0.12
NFKB1-205ENST00000505458 TSPYL6Q8N831 410 aa14.29□□□□□ -0.12
NFKB1-205ENST00000505458 TSPYL4Q9UJ04 414 aa14.29□□□□□ -0.12
NFKB1-205ENST00000505458 MSH5O43196 834 aa14.29□□□□□ -0.12
NFKB1-205ENST00000505458 AMOTQ4VCS5 1084 aa14.29□□□□□ -0.12
NFKB1-205ENST00000505458 INTS3Q68E01 1043 aaKnown RBP14.28□□□□□ -0.12
NFKB1-205ENST00000505458 CADPS2Q86UW7 1296 aa14.28□□□□□ -0.12
NFKB1-205ENST00000505458 UPF2Q9HAU5 1272 aaKnown RBP14.28□□□□□ -0.12
NFKB1-205ENST00000505458 MCM10Q7L590 875 aa14.28□□□□□ -0.12
NFKB1-205ENST00000505458 MED1Q15648 1581 aaPredicted RBP14.27□□□□□ -0.12
NFKB1-205ENST00000505458 ZBTB7BO15156 539 aaPredicted RBP14.27□□□□□ -0.13
NFKB1-205ENST00000505458 DCTN1Q14203 1278 aa14.27□□□□□ -0.13
NFKB1-205ENST00000505458 STK31Q9BXU1 1019 aa14.27□□□□□ -0.13
NFKB1-205ENST00000505458 N4BP2Q86UW6 1770 aaPredicted RBP14.27□□□□□ -0.13
NFKB1-205ENST00000505458 HOXB7P09629 217 aa14.26□□□□□ -0.13
NFKB1-205ENST00000505458 ARHGEF25Q86VW2 580 aa14.26□□□□□ -0.13
NFKB1-205ENST00000505458 PLEKHO1Q53GL0 409 aaPredicted RBP14.26□□□□□ -0.13
NFKB1-205ENST00000505458 KRT28Q7Z3Y7 464 aa14.26□□□□□ -0.13
NFKB1-205ENST00000505458 MSH6P52701 1360 aa14.26□□□□□ -0.13
NFKB1-205ENST00000505458 PXDNLA1KZ92 1463 aa14.26□□□□□ -0.13
NFKB1-205ENST00000505458 NPHP3Q7Z494 1330 aa14.25□□□□□ -0.13
NFKB1-205ENST00000505458 GCP02774 474 aa14.25□□□□□ -0.13
NFKB1-205ENST00000505458 TAF7Q15545 349 aaPredicted RBP14.25□□□□□ -0.13
NFKB1-205ENST00000505458 CCDC30Q5VVM6 783 aa14.25□□□□□ -0.13
NFKB1-205ENST00000505458 TMEM94Q12767 1356 aa14.25□□□□□ -0.13
NFKB1-205ENST00000505458 NUTM2GQ5VZR2 741 aa14.25□□□□□ -0.13
NFKB1-205ENST00000505458 CEMIPQ8WUJ3 1361 aa14.24□□□□□ -0.13
NFKB1-205ENST00000505458 CCT4P50991 539 aaKnown RBP14.24□□□□□ -0.13
NFKB1-205ENST00000505458 DAXXQ9UER7 740 aaPredicted RBP14.24□□□□□ -0.13
NFKB1-205ENST00000505458 NUCB1Q02818 461 aa14.23□□□□□ -0.13
NFKB1-205ENST00000505458 RPAP2Q8IXW5 612 aaPredicted RBP14.23□□□□□ -0.13
NFKB1-205ENST00000505458 ELL2O00472 640 aaPredicted RBP14.23□□□□□ -0.13
NFKB1-205ENST00000505458 FOXO3O43524 673 aa14.23□□□□□ -0.13
NFKB1-205ENST00000505458 AKAP4Q5JQC9 854 aa14.23□□□□□ -0.13
NFKB1-205ENST00000505458 NPM2Q86SE8 214 aaKnown RBP14.23□□□□□ -0.13
NFKB1-205ENST00000505458 ORAI2Q96SN7 254 aa14.23□□□□□ -0.13
NFKB1-205ENST00000505458 KDM3BQ7LBC6 1761 aa14.23□□□□□ -0.13
NFKB1-205ENST00000505458 STRCP1A6NGW2 1772 aa14.22□□□□□ -0.13
NFKB1-205ENST00000505458 RGS12O14924 1447 aa14.22□□□□□ -0.13
NFKB1-205ENST00000505458 TNS3Q68CZ2 1445 aa14.22□□□□□ -0.13
NFKB1-205ENST00000505458 HMMRO75330 724 aa14.2□□□□□ -0.14
NFKB1-205ENST00000505458 LTV1Q96GA3 475 aaPredicted RBP14.2□□□□□ -0.14
NFKB1-205ENST00000505458 ADAMTS7Q9UKP4 1686 aa14.2□□□□□ -0.14
NFKB1-205ENST00000505458 C1orf141Q5JVX7 400 aa14.2□□□□□ -0.14
NFKB1-205ENST00000505458 CHD1LQ86WJ1 897 aa14.19□□□□□ -0.14
NFKB1-205ENST00000505458 SLC4A2P04920 1241 aa14.19□□□□□ -0.14
NFKB1-205ENST00000505458 NBPF6Q5VWK0 638 aa14.19□□□□□ -0.14
NFKB1-205ENST00000505458 NBPF4Q96M43 638 aa14.19□□□□□ -0.14
NFKB1-205ENST00000505458 SKAP1Q86WV1 359 aa14.18□□□□□ -0.14
NFKB1-205ENST00000505458 ANKRD24Q8TF21 1146 aa14.18□□□□□ -0.14
NFKB1-205ENST00000505458 BECN1Q14457 450 aa14.18□□□□□ -0.14
NFKB1-205ENST00000505458 IL17REQ8NFR9 667 aa14.18□□□□□ -0.14
NFKB1-205ENST00000505458 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.18□□□□□ -0.142e-6■■■□□ 14.9
NFKB1-205ENST00000505458 RGPD2P0DJD1 1756 aa14.18□□□□□ -0.14
NFKB1-205ENST00000505458 ANKRD44Q8N8A2 993 aa14.18□□□□□ -0.14
NFKB1-205ENST00000505458 CPDO75976 1380 aa14.17□□□□□ -0.14
NFKB1-205ENST00000505458 RBM33Q96EV2 1170 aaKnown RBP14.17□□□□□ -0.14
NFKB1-205ENST00000505458 CRYBG1Q9Y4K1 1723 aa14.17□□□□□ -0.14
NFKB1-205ENST00000505458 PXDNQ92626 1479 aa14.17□□□□□ -0.14
NFKB1-205ENST00000505458 GNAI3P08754 354 aa14.17□□□□□ -0.14
NFKB1-205ENST00000505458 TEFQ10587 303 aa14.17□□□□□ -0.14
NFKB1-205ENST00000505458 ZNF530Q6P9A1 599 aaPredicted RBP14.17□□□□□ -0.14
NFKB1-205ENST00000505458 BMP2KLQ5H9B9 411 aa14.16□□□□□ -0.14
NFKB1-205ENST00000505458 ERBB3P21860 1342 aa14.16□□□□□ -0.14
NFKB1-205ENST00000505458 ATP10DQ9P241 1426 aa14.16□□□□□ -0.14
NFKB1-205ENST00000505458 COL18A1P39060 1754 aa14.15□□□□□ -0.14
NFKB1-205ENST00000505458 LMOD2Q6P5Q4 547 aa14.15□□□□□ -0.14
NFKB1-205ENST00000505458 DCTPP1Q9H773 170 aa14.15□□□□□ -0.14
NFKB1-205ENST00000505458 XIRP1Q702N8 1843 aaKnown RBP14.15□□□□□ -0.14
NFKB1-205ENST00000505458 SIPA1L3O60292 1781 aaPredicted RBP14.15□□□□□ -0.14
NFKB1-205ENST00000505458 HDAC5Q9UQL6 1122 aa14.15□□□□□ -0.14
NFKB1-205ENST00000505458 FLIIQ13045 1269 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms