RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 HSPA6P17066 643 aa16.5■□□□□ 0.23
CCHCR1-219ENST00000505392 ZCRB1Q8TBF4 217 aaKnown RBP16.5■□□□□ 0.23
CCHCR1-219ENST00000505392 CD2APQ9Y5K6 639 aa16.49■□□□□ 0.23
CCHCR1-219ENST00000505392 SIN3AQ96ST3 1273 aa16.48■□□□□ 0.23
CCHCR1-219ENST00000505392 NEUROD1Q13562 356 aa16.46■□□□□ 0.23
CCHCR1-219ENST00000505392 TERF2IPQ9NYB0 399 aa16.46■□□□□ 0.23
CCHCR1-219ENST00000505392 NSD2O96028 1365 aa16.46■□□□□ 0.23
CCHCR1-219ENST00000505392 USP47Q96K76 1375 aa16.46■□□□□ 0.23
CCHCR1-219ENST00000505392 COL24A1Q17RW2 1714 aa16.45■□□□□ 0.22
CCHCR1-219ENST00000505392 FBLN1P23142 703 aa16.45■□□□□ 0.22
CCHCR1-219ENST00000505392 CD163L1Q9NR16 1453 aa16.45■□□□□ 0.22
CCHCR1-219ENST00000505392 QSER1Q2KHR3 1735 aa16.45■□□□□ 0.22
CCHCR1-219ENST00000505392 HOXC9P31274 260 aa16.44■□□□□ 0.22
CCHCR1-219ENST00000505392 AMPHP49418 695 aa16.44■□□□□ 0.22
CCHCR1-219ENST00000505392 FLAD1Q8NFF5 587 aa16.44■□□□□ 0.22
CCHCR1-219ENST00000505392 WWC3Q9ULE0 1092 aa16.43■□□□□ 0.22
CCHCR1-219ENST00000505392 EDC4Q6P2E9 1401 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-219ENST00000505392 HMGB2P26583 209 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-219ENST00000505392 MAP3K19Q56UN5 1328 aa16.42■□□□□ 0.22
CCHCR1-219ENST00000505392 LTN1O94822 1766 aa16.41■□□□□ 0.22
CCHCR1-219ENST00000505392 NBPF6Q5VWK0 638 aa16.41■□□□□ 0.22
CCHCR1-219ENST00000505392 COG3Q96JB2 828 aa16.41■□□□□ 0.22
CCHCR1-219ENST00000505392 NBPF4Q96M43 638 aa16.41■□□□□ 0.22
CCHCR1-219ENST00000505392 ADCY9O60503 1353 aa16.4■□□□□ 0.22
CCHCR1-219ENST00000505392 MON2Q7Z3U7 1717 aa16.4■□□□□ 0.22
CCHCR1-219ENST00000505392 CARD11Q9BXL7 1154 aa16.4■□□□□ 0.22
CCHCR1-219ENST00000505392 A0A1W2PP64 1363 aa16.39■□□□□ 0.21
CCHCR1-219ENST00000505392 KIF3CO14782 793 aa16.39■□□□□ 0.21
CCHCR1-219ENST00000505392 MPRIPQ6WCQ1 1025 aa16.39■□□□□ 0.21
CCHCR1-219ENST00000505392 TUBGCP6Q96RT7 1819 aa16.39■□□□□ 0.21
CCHCR1-219ENST00000505392 IGSF1Q8N6C5 1336 aa16.39■□□□□ 0.21
CCHCR1-219ENST00000505392 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
CCHCR1-219ENST00000505392 USHBP1Q8N6Y0 703 aa16.38■□□□□ 0.21
CCHCR1-219ENST00000505392 RAPGEF4Q8WZA2 1011 aa16.38■□□□□ 0.21
CCHCR1-219ENST00000505392 LY75O60449 1722 aa16.38■□□□□ 0.21
CCHCR1-219ENST00000505392 MEGF6O75095 1541 aa16.37■□□□□ 0.21
CCHCR1-219ENST00000505392 AK7Q96M32 723 aa16.37■□□□□ 0.21
CCHCR1-219ENST00000505392 CGNL1Q0VF96 1302 aa16.37■□□□□ 0.21
CCHCR1-219ENST00000505392 USP54Q70EL1 1684 aa16.37■□□□□ 0.21
CCHCR1-219ENST00000505392 PHF14O94880 888 aa16.36■□□□□ 0.21
CCHCR1-219ENST00000505392 TATP17735 454 aaPredicted RBP16.36■□□□□ 0.21
CCHCR1-219ENST00000505392 RRS1Q15050 365 aaKnown RBP16.36■□□□□ 0.21
CCHCR1-219ENST00000505392 AMIGO3Q86WK7 504 aa16.36■□□□□ 0.21
CCHCR1-219ENST00000505392 PUS7Q96PZ0 661 aaKnown RBP16.36■□□□□ 0.21
CCHCR1-219ENST00000505392 APLP1P51693 650 aa16.35■□□□□ 0.21
CCHCR1-219ENST00000505392 DOT1LQ8TEK3 1739 aa16.35■□□□□ 0.21
CCHCR1-219ENST00000505392 PALLDQ8WX93 1383 aa16.35■□□□□ 0.21
CCHCR1-219ENST00000505392 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.34■□□□□ 0.21
CCHCR1-219ENST00000505392 DNAJC5GQ8N7S2 189 aa16.34■□□□□ 0.21
CCHCR1-219ENST00000505392 SMARCC1Q92922 1105 aaPredicted RBP16.33■□□□□ 0.2
CCHCR1-219ENST00000505392 TOMM70O94826 608 aa16.32■□□□□ 0.2
CCHCR1-219ENST00000505392 PCDH11XQ9BZA7 1347 aa16.31■□□□□ 0.2
CCHCR1-219ENST00000505392 PCDH11YQ9BZA8 1340 aa16.31■□□□□ 0.2
CCHCR1-219ENST00000505392 CYP27B1O15528 508 aa16.31■□□□□ 0.2
CCHCR1-219ENST00000505392 HSP90AB2PQ58FF8 381 aa16.3■□□□□ 0.2
CCHCR1-219ENST00000505392 PIGBQ92521 554 aa16.3■□□□□ 0.2
CCHCR1-219ENST00000505392 FAM208AQ9UK61 1670 aaKnown RBP16.3■□□□□ 0.2
CCHCR1-219ENST00000505392 FYB1O15117 783 aa16.29■□□□□ 0.2
CCHCR1-219ENST00000505392 SSFA2P28290 1259 aa16.29■□□□□ 0.2
CCHCR1-219ENST00000505392 GGNBP2Q9H3C7 697 aa16.29■□□□□ 0.2
CCHCR1-219ENST00000505392 RTL1A6NKG5 1358 aa16.27■□□□□ 0.2
CCHCR1-219ENST00000505392 LOC102724428A0A0B4J2F2 783 aa16.27■□□□□ 0.2
CCHCR1-219ENST00000505392 SIK1P57059 783 aa16.27■□□□□ 0.2
CCHCR1-219ENST00000505392 ARHGAP27Q6ZUM4 889 aa16.27■□□□□ 0.2
CCHCR1-219ENST00000505392 LINC00116Q8NCU8 138 aa16.27■□□□□ 0.2
CCHCR1-219ENST00000505392 BCS1LQ9Y276 419 aa16.27■□□□□ 0.2
CCHCR1-219ENST00000505392 RGPD2P0DJD1 1756 aa16.27■□□□□ 0.2
CCHCR1-219ENST00000505392 SMG6Q86US8 1419 aaKnown RBP16.27■□□□□ 0.19
CCHCR1-219ENST00000505392 ST20-MTHFSA0A0A6YYL1 179 aa16.26■□□□□ 0.19
CCHCR1-219ENST00000505392 A0A0G2JLW4 131 aa16.26■□□□□ 0.19
CCHCR1-219ENST00000505392 MMP10P09238 476 aa16.26■□□□□ 0.19
CCHCR1-219ENST00000505392 TESK2Q96S53 571 aa16.26■□□□□ 0.19
CCHCR1-219ENST00000505392 C5P01031 1676 aa16.26■□□□□ 0.19
CCHCR1-219ENST00000505392 GNPATO15228 680 aa16.25■□□□□ 0.19
CCHCR1-219ENST00000505392 ATP6V1AP38606 617 aa16.25■□□□□ 0.19
CCHCR1-219ENST00000505392 TGFB2P61812 414 aa16.25■□□□□ 0.19
CCHCR1-219ENST00000505392 NMRK2Q9NPI5 230 aa16.25■□□□□ 0.19
CCHCR1-219ENST00000505392 NSD3Q9BZ95 1437 aa16.25■□□□□ 0.19
CCHCR1-219ENST00000505392 NKX1-1Q15270 411 aaPredicted RBP16.24■□□□□ 0.19
CCHCR1-219ENST00000505392 C4BP0C0L5 1744 aa16.24■□□□□ 0.19
CCHCR1-219ENST00000505392 INSRP06213 1382 aa16.24■□□□□ 0.19
CCHCR1-219ENST00000505392 SLC24A1O60721 1099 aa16.23■□□□□ 0.19
CCHCR1-219ENST00000505392 ITPK1Q13572 414 aa16.23■□□□□ 0.19
CCHCR1-219ENST00000505392 COL13A1Q5TAT6 717 aaPredicted RBP16.23■□□□□ 0.19
CCHCR1-219ENST00000505392 ASAP1Q9ULH1 1129 aa16.23■□□□□ 0.19
CCHCR1-219ENST00000505392 HTRA3P83110 453 aa16.22■□□□□ 0.19
CCHCR1-219ENST00000505392 TRAPPC3LQ5T215 181 aa16.22■□□□□ 0.19
CCHCR1-219ENST00000505392 NLGN1Q8N2Q7 840 aa16.22■□□□□ 0.19
CCHCR1-219ENST00000505392 TMOD3Q9NYL9 352 aa16.22■□□□□ 0.19
CCHCR1-219ENST00000505392 SPG7Q9UQ90 795 aa16.22■□□□□ 0.19
CCHCR1-219ENST00000505392 FCHSD2O94868 740 aa16.21■□□□□ 0.19
CCHCR1-219ENST00000505392 TMF1P82094 1093 aa16.21■□□□□ 0.19
CCHCR1-219ENST00000505392 C16orf71Q8IYS4 520 aaPredicted RBP16.21■□□□□ 0.19
CCHCR1-219ENST00000505392 TAF1LQ8IZX4 1826 aa16.21■□□□□ 0.19
CCHCR1-219ENST00000505392 DPEP1P16444 411 aa16.2■□□□□ 0.18
CCHCR1-219ENST00000505392 RBM46Q8TBY0 533 aaKnown RBP16.2■□□□□ 0.18
CCHCR1-219ENST00000505392 KLRG1Q96E93 195 aa16.2■□□□□ 0.18
CCHCR1-219ENST00000505392 RTCBQ9Y3I0 505 aaKnown RBP16.2■□□□□ 0.18
CCHCR1-219ENST00000505392 PXDNLA1KZ92 1463 aa16.19■□□□□ 0.18
CCHCR1-219ENST00000505392 FLT4P35916 1363 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms