RNA–Protein interactions for RNA: ENST00000505377.1

COL25A1-205, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 448 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-205ENST00000505377 EDC4Q6P2E9 1401 aaKnown RBP17.11■□□□□ 0.33
COL25A1-205ENST00000505377 MSL1Q68DK7 614 aa17.1■□□□□ 0.33
COL25A1-205ENST00000505377 COL23A1Q86Y22 540 aaPredicted RBP17.1■□□□□ 0.33
COL25A1-205ENST00000505377 CARD11Q9BXL7 1154 aa17.1■□□□□ 0.33
COL25A1-205ENST00000505377 QSER1Q2KHR3 1735 aa17.1■□□□□ 0.33
COL25A1-205ENST00000505377 SHANK3Q9BYB0 1731 aa17.1■□□□□ 0.33
COL25A1-205ENST00000505377 MAP3K19Q56UN5 1328 aa17.09■□□□□ 0.33
COL25A1-205ENST00000505377 ANKRD36BQ8N2N9 1353 aa17.09■□□□□ 0.33
COL25A1-205ENST00000505377 MSH5O43196 834 aa17.08■□□□□ 0.32
COL25A1-205ENST00000505377 HOXC9P31274 260 aa17.08■□□□□ 0.32
COL25A1-205ENST00000505377 ZCRB1Q8TBF4 217 aaKnown RBP17.08■□□□□ 0.32
COL25A1-205ENST00000505377 TERF2IPQ9NYB0 399 aa17.08■□□□□ 0.32
COL25A1-205ENST00000505377 CCNL1Q9UK58 526 aaPredicted RBP17.08■□□□□ 0.32
COL25A1-205ENST00000505377 RGPD2P0DJD1 1756 aa17.07■□□□□ 0.32
COL25A1-205ENST00000505377 DOT1LQ8TEK3 1739 aa17.07■□□□□ 0.32
COL25A1-205ENST00000505377 MEGF6O75095 1541 aa17.07■□□□□ 0.32
COL25A1-205ENST00000505377 USHBP1Q8N6Y0 703 aa17.06■□□□□ 0.32
COL25A1-205ENST00000505377 LY75O60449 1722 aa17.06■□□□□ 0.32
COL25A1-205ENST00000505377 FAM208AQ9UK61 1670 aaKnown RBP17.06■□□□□ 0.32
COL25A1-205ENST00000505377 AMPHP49418 695 aa17.05■□□□□ 0.32
COL25A1-205ENST00000505377 NBPF6Q5VWK0 638 aa17.04■□□□□ 0.32
COL25A1-205ENST00000505377 NBPF4Q96M43 638 aa17.04■□□□□ 0.32
COL25A1-205ENST00000505377 RRS1Q15050 365 aaKnown RBP17.03■□□□□ 0.32
COL25A1-205ENST00000505377 IFFO2Q5TF58 517 aa17.03■□□□□ 0.32
COL25A1-205ENST00000505377 COG3Q96JB2 828 aa17.03■□□□□ 0.32
COL25A1-205ENST00000505377 GRIN3BO60391 1043 aa17.02■□□□□ 0.32
COL25A1-205ENST00000505377 SMIM5Q71RC9 77 aa17.02■□□□□ 0.32
COL25A1-205ENST00000505377 ATP10DQ9P241 1426 aa17.02■□□□□ 0.31
COL25A1-205ENST00000505377 AMIGO3Q86WK7 504 aa17.01■□□□□ 0.31
COL25A1-205ENST00000505377 TESK2Q96S53 571 aa17.01■□□□□ 0.31
COL25A1-205ENST00000505377 WWC3Q9ULE0 1092 aa17.01■□□□□ 0.31
COL25A1-205ENST00000505377 USP47Q96K76 1375 aa17.01■□□□□ 0.31
COL25A1-205ENST00000505377 PUS7Q96PZ0 661 aaKnown RBP16.99■□□□□ 0.31
COL25A1-205ENST00000505377 ST20-MTHFSA0A0A6YYL1 179 aa16.98■□□□□ 0.31
COL25A1-205ENST00000505377 ZNF526Q8TF50 670 aaPredicted RBP16.98■□□□□ 0.31
COL25A1-205ENST00000505377 GGNBP2Q9H3C7 697 aa16.97■□□□□ 0.31
COL25A1-205ENST00000505377 FYB1O15117 783 aa16.96■□□□□ 0.31
COL25A1-205ENST00000505377 HSP90AB2PQ58FF8 381 aa16.96■□□□□ 0.31
COL25A1-205ENST00000505377 MPRIPQ6WCQ1 1025 aa16.96■□□□□ 0.31
COL25A1-205ENST00000505377 CD2APQ9Y5K6 639 aa16.96■□□□□ 0.31
COL25A1-205ENST00000505377 PALLDQ8WX93 1383 aa16.95■□□□□ 0.3
COL25A1-205ENST00000505377 CYP27B1O15528 508 aa16.95■□□□□ 0.3
COL25A1-205ENST00000505377 RAPGEF4Q8WZA2 1011 aa16.95■□□□□ 0.3
COL25A1-205ENST00000505377 C5P01031 1676 aa16.94■□□□□ 0.3
COL25A1-205ENST00000505377 TATP17735 454 aaPredicted RBP16.94■□□□□ 0.3
COL25A1-205ENST00000505377 GPBP1L1Q9HC44 474 aaPredicted RBP16.94■□□□□ 0.3
COL25A1-205ENST00000505377 RTL1A6NKG5 1358 aa16.93■□□□□ 0.3
COL25A1-205ENST00000505377 ADCY9O60503 1353 aa16.93■□□□□ 0.3
COL25A1-205ENST00000505377 PHF14O94880 888 aa16.93■□□□□ 0.3
COL25A1-205ENST00000505377 TAF1LQ8IZX4 1826 aa16.92■□□□□ 0.3
COL25A1-205ENST00000505377 CGNL1Q0VF96 1302 aa16.92■□□□□ 0.3
COL25A1-205ENST00000505377 IGSF1Q8N6C5 1336 aa16.91■□□□□ 0.3
COL25A1-205ENST00000505377 PCDH11XQ9BZA7 1347 aa16.91■□□□□ 0.3
COL25A1-205ENST00000505377 PCDH11YQ9BZA8 1340 aa16.91■□□□□ 0.3
COL25A1-205ENST00000505377 TOGARAM1Q9Y4F4 1720 aa16.9■□□□□ 0.3
COL25A1-205ENST00000505377 HSPA6P17066 643 aa16.9■□□□□ 0.3
COL25A1-205ENST00000505377 FLAD1Q8NFF5 587 aa16.9■□□□□ 0.3
COL25A1-205ENST00000505377 PIGBQ92521 554 aa16.9■□□□□ 0.3
COL25A1-205ENST00000505377 AK7Q96M32 723 aa16.9■□□□□ 0.3
COL25A1-205ENST00000505377 TONSLQ96HA7 1378 aa16.89■□□□□ 0.3
COL25A1-205ENST00000505377 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.89■□□□□ 0.29
COL25A1-205ENST00000505377 C4BP0C0L5 1744 aa16.89■□□□□ 0.29
COL25A1-205ENST00000505377 INSRP06213 1382 aa16.89■□□□□ 0.29
COL25A1-205ENST00000505377 LINC00116Q8NCU8 138 aa16.88■□□□□ 0.29
COL25A1-205ENST00000505377 SMG6Q86US8 1419 aaKnown RBP16.87■□□□□ 0.29
COL25A1-205ENST00000505377 ITGB4P16144 1822 aa16.87■□□□□ 0.29
COL25A1-205ENST00000505377 EMILIN1Q9Y6C2 1016 aa16.87■□□□□ 0.29
COL25A1-205ENST00000505377 UBR3Q6ZT12 1888 aa16.86■□□□□ 0.29
COL25A1-205ENST00000505377 KIF3CO14782 793 aa16.86■□□□□ 0.29
COL25A1-205ENST00000505377 ITPK1Q13572 414 aa16.86■□□□□ 0.29
COL25A1-205ENST00000505377 SMARCC1Q92922 1105 aaPredicted RBP16.86■□□□□ 0.29
COL25A1-205ENST00000505377 FLT4P35916 1363 aa16.85■□□□□ 0.29
COL25A1-205ENST00000505377 LOC102724428A0A0B4J2F2 783 aa16.84■□□□□ 0.29
COL25A1-205ENST00000505377 SIK1P57059 783 aa16.84■□□□□ 0.29
COL25A1-205ENST00000505377 CARD14Q9BXL6 1004 aa16.84■□□□□ 0.29
COL25A1-205ENST00000505377 ASAP1Q9ULH1 1129 aa16.84■□□□□ 0.29
COL25A1-205ENST00000505377 MAP2P11137 1827 aaKnown RBP16.83■□□□□ 0.28
COL25A1-205ENST00000505377 NKX1-1Q15270 411 aaPredicted RBP16.83■□□□□ 0.28
COL25A1-205ENST00000505377 GNPATO15228 680 aa16.82■□□□□ 0.28
COL25A1-205ENST00000505377 PPM1GO15355 546 aaPredicted RBP16.82■□□□□ 0.28
COL25A1-205ENST00000505377 SSFA2P28290 1259 aa16.82■□□□□ 0.28
COL25A1-205ENST00000505377 MMP10P09238 476 aa16.81■□□□□ 0.28
COL25A1-205ENST00000505377 PKD1L3Q7Z443 1732 aa16.8■□□□□ 0.28
COL25A1-205ENST00000505377 TMF1P82094 1093 aa16.8■□□□□ 0.28
COL25A1-205ENST00000505377 EYA1Q99502 592 aa16.8■□□□□ 0.28
COL25A1-205ENST00000505377 A0A0G2JLW4 131 aa16.79■□□□□ 0.28
COL25A1-205ENST00000505377 ATP6V1AP38606 617 aa16.79■□□□□ 0.28
COL25A1-205ENST00000505377 ATG3Q9NT62 314 aa16.79■□□□□ 0.28
COL25A1-205ENST00000505377 TMOD3Q9NYL9 352 aa16.79■□□□□ 0.28
COL25A1-205ENST00000505377 KIF20BQ96Q89 1820 aa16.79■□□□□ 0.28
COL25A1-205ENST00000505377 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
COL25A1-205ENST00000505377 KIF24Q5T7B8 1368 aa16.78■□□□□ 0.28
COL25A1-205ENST00000505377 SLC4A9Q96Q91 983 aa16.78■□□□□ 0.28
COL25A1-205ENST00000505377 SPG7Q9UQ90 795 aa16.78■□□□□ 0.28
COL25A1-205ENST00000505377 PXDNLA1KZ92 1463 aa16.78■□□□□ 0.28
COL25A1-205ENST00000505377 HMGB2P26583 209 aaKnown RBP16.77■□□□□ 0.28
COL25A1-205ENST00000505377 SLC24A1O60721 1099 aa16.76■□□□□ 0.27
COL25A1-205ENST00000505377 PHKG2P15735 406 aa16.76■□□□□ 0.27
COL25A1-205ENST00000505377 BCS1LQ9Y276 419 aa16.76■□□□□ 0.27
COL25A1-205ENST00000505377 NSD3Q9BZ95 1437 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms