RNA–Protein interactions for RNA: ENST00000505218.1

GAPDHP40-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 40, humanhuman

BASIC

Gene GAPDHP40, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP40-201ENST00000505218 WNK3Q9BYP7 1800 aa20.62■□□□□ 0.89
GAPDHP40-201ENST00000505218 TATP17735 454 aaPredicted RBP20.61■□□□□ 0.89
GAPDHP40-201ENST00000505218 RXRBP28702 533 aa20.61■□□□□ 0.89
GAPDHP40-201ENST00000505218 RAPGEF4Q8WZA2 1011 aa20.61■□□□□ 0.89
GAPDHP40-201ENST00000505218 PHACTR3Q96KR7 559 aa20.61■□□□□ 0.89
GAPDHP40-201ENST00000505218 PARP4Q9UKK3 1724 aaKnown RBP20.59■□□□□ 0.89
GAPDHP40-201ENST00000505218 AMOTQ4VCS5 1084 aa20.59■□□□□ 0.89
GAPDHP40-201ENST00000505218 PNNQ9H307 717 aaKnown RBP20.59■□□□□ 0.89
GAPDHP40-201ENST00000505218 TNS2Q63HR2 1409 aa20.59■□□□□ 0.89
GAPDHP40-201ENST00000505218 PKD1L3Q7Z443 1732 aa20.58■□□□□ 0.89
GAPDHP40-201ENST00000505218 RUNDC1Q96C34 613 aa20.58■□□□□ 0.89
GAPDHP40-201ENST00000505218 MTHFSDQ2M296 383 aaKnown RBP20.57■□□□□ 0.88
GAPDHP40-201ENST00000505218 SEPT12Q8IYM1 358 aa20.57■□□□□ 0.88
GAPDHP40-201ENST00000505218 ZCRB1Q8TBF4 217 aaKnown RBP20.57■□□□□ 0.88
GAPDHP40-201ENST00000505218 LRRC37A3O60309 1634 aa20.56■□□□□ 0.88
GAPDHP40-201ENST00000505218 RGS12O14924 1447 aa20.56■□□□□ 0.88
GAPDHP40-201ENST00000505218 PLEKHO1Q53GL0 409 aaPredicted RBP20.56■□□□□ 0.88
GAPDHP40-201ENST00000505218 EXOC5O00471 708 aa20.55■□□□□ 0.88
GAPDHP40-201ENST00000505218 CYP27B1O15528 508 aa20.55■□□□□ 0.88
GAPDHP40-201ENST00000505218 NCBP3Q53F19 620 aaKnown RBP20.55■□□□□ 0.88
GAPDHP40-201ENST00000505218 FAM9BQ8IZU0 186 aa20.55■□□□□ 0.88
GAPDHP40-201ENST00000505218 SHANK3Q9BYB0 1731 aa20.54■□□□□ 0.88
GAPDHP40-201ENST00000505218 NKX1-1Q15270 411 aaPredicted RBP20.54■□□□□ 0.88
GAPDHP40-201ENST00000505218 DDB1Q16531 1140 aa20.54■□□□□ 0.88
GAPDHP40-201ENST00000505218 SPG7Q9UQ90 795 aa20.54■□□□□ 0.88
GAPDHP40-201ENST00000505218 BCL9O00512 1426 aa20.53■□□□□ 0.88
GAPDHP40-201ENST00000505218 PHKG2P15735 406 aa20.52■□□□□ 0.88
GAPDHP40-201ENST00000505218 CCDC146Q8IYE0 955 aa20.52■□□□□ 0.88
GAPDHP40-201ENST00000505218 MARCH10Q8NA82 808 aaPredicted RBP20.52■□□□□ 0.88
GAPDHP40-201ENST00000505218 GAS2L2Q8NHY3 880 aa20.52■□□□□ 0.88
GAPDHP40-201ENST00000505218 PCDH11XQ9BZA7 1347 aa20.52■□□□□ 0.87
GAPDHP40-201ENST00000505218 PCDH11YQ9BZA8 1340 aa20.52■□□□□ 0.87
GAPDHP40-201ENST00000505218 NFE2L2Q16236 605 aa20.51■□□□□ 0.87
GAPDHP40-201ENST00000505218 TMPOP42166 694 aaKnown RBP20.5■□□□□ 0.87
GAPDHP40-201ENST00000505218 AKAP4Q5JQC9 854 aa20.5■□□□□ 0.87
GAPDHP40-201ENST00000505218 IFNL2Q8IZJ0 200 aa20.5■□□□□ 0.87
GAPDHP40-201ENST00000505218 APAF1O14727 1248 aa20.49■□□□□ 0.87
GAPDHP40-201ENST00000505218 ZNF530Q6P9A1 599 aaPredicted RBP20.49■□□□□ 0.87
GAPDHP40-201ENST00000505218 ADAMTS7Q9UKP4 1686 aa20.48■□□□□ 0.87
GAPDHP40-201ENST00000505218 HTATSF1O43719 755 aaKnown RBP20.48■□□□□ 0.87
GAPDHP40-201ENST00000505218 MAPK8IP3Q9UPT6 1336 aa20.48■□□□□ 0.87
GAPDHP40-201ENST00000505218 MAP3K5Q99683 1374 aa20.46■□□□□ 0.87
GAPDHP40-201ENST00000505218 KDM6AO15550 1401 aaPredicted RBP20.46■□□□□ 0.87
GAPDHP40-201ENST00000505218 CCDC27Q2M243 656 aa20.46■□□□□ 0.87
GAPDHP40-201ENST00000505218 KRT27Q7Z3Y8 459 aa20.46■□□□□ 0.87
GAPDHP40-201ENST00000505218 TRIM35Q9UPQ4 493 aa20.46■□□□□ 0.87
GAPDHP40-201ENST00000505218 CEMIPQ8WUJ3 1361 aa20.46■□□□□ 0.87
GAPDHP40-201ENST00000505218 NEFMP07197 916 aa20.45■□□□□ 0.86
GAPDHP40-201ENST00000505218 PDE3BQ13370 1112 aa20.45■□□□□ 0.86
GAPDHP40-201ENST00000505218 NGEFQ8N5V2 710 aa20.45■□□□□ 0.86
GAPDHP40-201ENST00000505218 DDX54Q8TDD1 881 aaKnown RBP20.45■□□□□ 0.86
GAPDHP40-201ENST00000505218 GNAT3A8MTJ3 354 aa20.44■□□□□ 0.86
GAPDHP40-201ENST00000505218 HSP90AB1P08238 724 aaKnown RBP20.44■□□□□ 0.86
GAPDHP40-201ENST00000505218 IL17REQ8NFR9 667 aa20.44■□□□□ 0.86
GAPDHP40-201ENST00000505218 DCAF5Q96JK2 942 aa20.44■□□□□ 0.86
GAPDHP40-201ENST00000505218 RIPK4P57078 832 aa20.43■□□□□ 0.86
GAPDHP40-201ENST00000505218 BRWD3Q6RI45 1802 aa20.43■□□□□ 0.86
GAPDHP40-201ENST00000505218 RNMTO43148 476 aaKnown RBP20.42■□□□□ 0.86
GAPDHP40-201ENST00000505218 C1orf141Q5JVX7 400 aa20.42■□□□□ 0.86
GAPDHP40-201ENST00000505218 LGR6Q9HBX8 967 aa20.42■□□□□ 0.86
GAPDHP40-201ENST00000505218 A0A0G2JS52 829 aa20.41■□□□□ 0.86
GAPDHP40-201ENST00000505218 MYT1Q01538 1121 aa20.41■□□□□ 0.86
GAPDHP40-201ENST00000505218 RRP7AQ9Y3A4 280 aaKnown RBP20.41■□□□□ 0.86
GAPDHP40-201ENST00000505218 ZNF521Q96K83 1311 aa20.41■□□□□ 0.86
GAPDHP40-201ENST00000505218 MRC1P22897 1456 aa20.41■□□□□ 0.86
GAPDHP40-201ENST00000505218 ERVV-2B6SEH9 535 aa20.4■□□□□ 0.86
GAPDHP40-201ENST00000505218 MPRIPQ6WCQ1 1025 aa20.4■□□□□ 0.86
GAPDHP40-201ENST00000505218 LMOD3Q0VAK6 560 aa20.38■□□□□ 0.85
GAPDHP40-201ENST00000505218 FAM196AQ6ZSG2 479 aa20.38■□□□□ 0.85
GAPDHP40-201ENST00000505218 WWC1Q8IX03 1113 aa20.38■□□□□ 0.85
GAPDHP40-201ENST00000505218 TOGARAM1Q9Y4F4 1720 aa20.37■□□□□ 0.85
GAPDHP40-201ENST00000505218 DCTN1Q14203 1278 aa20.37■□□□□ 0.85
GAPDHP40-201ENST00000505218 FAM182BQ5T319 152 aa20.37■□□□□ 0.85
GAPDHP40-201ENST00000505218 DLG5Q8TDM6 1919 aa20.36■□□□□ 0.85
GAPDHP40-201ENST00000505218 MCM10Q7L590 875 aa20.36■□□□□ 0.85
GAPDHP40-201ENST00000505218 NEUROD2Q15784 382 aa20.35■□□□□ 0.85
GAPDHP40-201ENST00000505218 RTF1Q92541 710 aaKnown RBP20.35■□□□□ 0.85
GAPDHP40-201ENST00000505218 SLC52A2Q9HAB3 445 aa20.35■□□□□ 0.85
GAPDHP40-201ENST00000505218 SCN11AQ9UI33 1791 aa20.34■□□□□ 0.85
GAPDHP40-201ENST00000505218 ZNF853P0CG23 659 aa20.34■□□□□ 0.85
GAPDHP40-201ENST00000505218 PRIM1P49642 420 aaKnown RBP20.33■□□□□ 0.85
GAPDHP40-201ENST00000505218 WDR63Q8IWG1 891 aa20.33■□□□□ 0.85
GAPDHP40-201ENST00000505218 THUMPD2Q9BTF0 503 aaKnown RBP20.33■□□□□ 0.85
GAPDHP40-201ENST00000505218 EP400Q96L91 3159 aa20.32■□□□□ 0.84
GAPDHP40-201ENST00000505218 IL16Q14005 1332 aa20.32■□□□□ 0.84
GAPDHP40-201ENST00000505218 KCNQ2O43526 872 aa20.32■□□□□ 0.84
GAPDHP40-201ENST00000505218 PTF1AQ7RTS3 328 aa20.32■□□□□ 0.84
GAPDHP40-201ENST00000505218 PIGBQ92521 554 aa20.32■□□□□ 0.84
GAPDHP40-201ENST00000505218 SENP3-EIF4A1A0A087X0R7 540 aa20.31■□□□□ 0.84
GAPDHP40-201ENST00000505218 NFATC2IPQ8NCF5 419 aa20.31■□□□□ 0.84
GAPDHP40-201ENST00000505218 BCL11BQ9C0K0 894 aaPredicted RBP20.31■□□□□ 0.84
GAPDHP40-201ENST00000505218 BABAM1Q9NWV8 329 aa20.31■□□□□ 0.84
GAPDHP40-201ENST00000505218 NHSQ6T4R5 1651 aa20.31■□□□□ 0.84
GAPDHP40-201ENST00000505218 ILDR2Q71H61 639 aa20.3■□□□□ 0.84
GAPDHP40-201ENST00000505218 DOT1LQ8TEK3 1739 aa20.3■□□□□ 0.84
GAPDHP40-201ENST00000505218 SIPA1L3O60292 1781 aaPredicted RBP20.29■□□□□ 0.84
GAPDHP40-201ENST00000505218 CHL1O00533 1208 aa20.29■□□□□ 0.84
GAPDHP40-201ENST00000505218 CABP4P57796 275 aa20.29■□□□□ 0.84
GAPDHP40-201ENST00000505218 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
GAPDHP40-201ENST00000505218 ACSBG1Q96GR2 724 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 218 ms