RNA–Protein interactions for RNA: ENST00000505119.1

NEK1-202, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-202ENST00000505119 POM121Q96HA1 1249 aa11.58□□□□□ -0.56
NEK1-202ENST00000505119 CCDC85AQ96PX6 553 aaPredicted RBP11.58□□□□□ -0.56
NEK1-202ENST00000505119 FIGNL2A6NMB9 653 aa11.57□□□□□ -0.56
NEK1-202ENST00000505119 PHTF2Q8N3S3 785 aa11.57□□□□□ -0.56
NEK1-202ENST00000505119 IRF7Q92985 503 aa11.57□□□□□ -0.56
NEK1-202ENST00000505119 WIPF1O43516 503 aa11.56□□□□□ -0.56
NEK1-202ENST00000505119 TRAK2O60296 914 aa11.56□□□□□ -0.56
NEK1-202ENST00000505119 SEMA3FQ13275 785 aa11.56□□□□□ -0.56
NEK1-202ENST00000505119 FOXD4L5Q5VV16 416 aaPredicted RBP11.56□□□□□ -0.56
NEK1-202ENST00000505119 RNF135Q8IUD6 432 aa11.56□□□□□ -0.56
NEK1-202ENST00000505119 OSBPL3Q9H4L5 887 aa11.56□□□□□ -0.56
NEK1-202ENST00000505119 ESF1Q9H501 851 aaKnown RBP11.56□□□□□ -0.56
NEK1-202ENST00000505119 MYCP01106 439 aaPredicted RBP11.55□□□□□ -0.56
NEK1-202ENST00000505119 PTSQ03393 145 aa11.55□□□□□ -0.56
NEK1-202ENST00000505119 DOLKQ9UPQ8 538 aa11.55□□□□□ -0.56
NEK1-202ENST00000505119 PPFIA3O75145 1194 aa11.53□□□□□ -0.56
NEK1-202ENST00000505119 CDCA7Q9BWT1 371 aaPredicted RBP11.53□□□□□ -0.56
NEK1-202ENST00000505119 CHIC2Q9UKJ5 165 aa11.53□□□□□ -0.56
NEK1-202ENST00000505119 A0A1W2PRU2 124 aa11.52□□□□□ -0.57
NEK1-202ENST00000505119 MEN1O00255 615 aa11.52□□□□□ -0.57
NEK1-202ENST00000505119 VSIG8P0DPA2 414 aa11.52□□□□□ -0.57
NEK1-202ENST00000505119 GPC1P35052 558 aa11.52□□□□□ -0.57
NEK1-202ENST00000505119 RNF144AP50876 292 aaPredicted RBP11.52□□□□□ -0.57
NEK1-202ENST00000505119 CLN3Q13286 438 aa11.51□□□□□ -0.57
NEK1-202ENST00000505119 ARHGEF10LQ9HCE6 1279 aa11.51□□□□□ -0.57
NEK1-202ENST00000505119 ERBB4Q15303 1308 aa11.51□□□□□ -0.57
NEK1-202ENST00000505119 USP4Q13107 963 aa11.5□□□□□ -0.57
NEK1-202ENST00000505119 LYSMD3Q7Z3D4 306 aa11.5□□□□□ -0.57
NEK1-202ENST00000505119 SLC35F4A4IF30 521 aa11.49□□□□□ -0.57
NEK1-202ENST00000505119 GNRH1P01148 92 aa11.49□□□□□ -0.57
NEK1-202ENST00000505119 MAP7D1Q3KQU3 841 aa11.49□□□□□ -0.57
NEK1-202ENST00000505119 TSGA10IPQ3SY00 556 aa11.49□□□□□ -0.57
NEK1-202ENST00000505119 CCDC155Q8N6L0 562 aa11.49□□□□□ -0.57
NEK1-202ENST00000505119 NLRP3Q96P20 1036 aa11.49□□□□□ -0.57
NEK1-202ENST00000505119 OXLD1Q5BKU9 147 aa11.48□□□□□ -0.57
NEK1-202ENST00000505119 SIRT1Q96EB6 747 aa11.48□□□□□ -0.57
NEK1-202ENST00000505119 ALG2Q9H553 416 aa11.48□□□□□ -0.57
NEK1-202ENST00000505119 GMPRP36959 345 aa11.47□□□□□ -0.57
NEK1-202ENST00000505119 PLPP7Q8NBV4 271 aa11.47□□□□□ -0.57
NEK1-202ENST00000505119 RAB6BQ9NRW1 208 aa11.46□□□□□ -0.57
NEK1-202ENST00000505119 SENP3-EIF4A1A0A087X0R7 540 aa11.45□□□□□ -0.58
NEK1-202ENST00000505119 INSM1Q01101 510 aaPredicted RBP11.45□□□□□ -0.58
NEK1-202ENST00000505119 SLC27A3Q5K4L6 730 aa11.45□□□□□ -0.58
NEK1-202ENST00000505119 PRICKLE2Q7Z3G6 844 aa11.45□□□□□ -0.58
NEK1-202ENST00000505119 ESYT1Q9BSJ8 1104 aa11.44□□□□□ -0.58
NEK1-202ENST00000505119 POM121CA8CG34 1229 aa11.43□□□□□ -0.58
NEK1-202ENST00000505119 PIK3CDO00329 1044 aa11.43□□□□□ -0.58
NEK1-202ENST00000505119 IL2RAP01589 272 aa11.43□□□□□ -0.58
NEK1-202ENST00000505119 ITGA6P23229 1130 aa11.43□□□□□ -0.58
NEK1-202ENST00000505119 ESCO1Q5FWF5 840 aa11.43□□□□□ -0.58
NEK1-202ENST00000505119 NFATC2IPQ8NCF5 419 aa11.43□□□□□ -0.58
NEK1-202ENST00000505119 CNKSR1Q969H4 720 aa11.43□□□□□ -0.58
NEK1-202ENST00000505119 NANOS1Q8WY41 292 aaKnown RBP11.42□□□□□ -0.58
NEK1-202ENST00000505119 CLUAP1Q96AJ1 413 aa11.42□□□□□ -0.58
NEK1-202ENST00000505119 GRIP2Q9C0E4 1043 aa11.42□□□□□ -0.58
NEK1-202ENST00000505119 RHOQP17081 205 aa11.41□□□□□ -0.58
NEK1-202ENST00000505119 PROSER2Q86WR7 435 aaPredicted RBP11.41□□□□□ -0.58
NEK1-202ENST00000505119 ADAMTS19Q8TE59 1207 aa11.4□□□□□ -0.58
NEK1-202ENST00000505119 HRH3Q9Y5N1 445 aa11.4□□□□□ -0.58
NEK1-202ENST00000505119 SPATA31C2B4DYI2 1134 aa11.39□□□□□ -0.59
NEK1-202ENST00000505119 SKIP12755 728 aa11.39□□□□□ -0.59
NEK1-202ENST00000505119 XAGE2Q96GT9 111 aa11.39□□□□□ -0.59
NEK1-202ENST00000505119 ETNK1Q9HBU6 452 aa11.39□□□□□ -0.59
NEK1-202ENST00000505119 WDR44Q5JSH3 913 aa11.38□□□□□ -0.59
NEK1-202ENST00000505119 NBPF10Q6P3W6 841 aaKnown RBP11.38□□□□□ -0.59
NEK1-202ENST00000505119 FNBP4Q8N3X1 1017 aaPredicted RBP11.38□□□□□ -0.59
NEK1-202ENST00000505119 NBPF15Q8N660 670 aa11.38□□□□□ -0.59
NEK1-202ENST00000505119 LZTS3O60299 673 aaPredicted RBP11.37□□□□□ -0.59
NEK1-202ENST00000505119 CENPCQ03188 943 aa11.37□□□□□ -0.59
NEK1-202ENST00000505119 POU4F2Q12837 409 aa11.37□□□□□ -0.59
NEK1-202ENST00000505119 EML3Q32P44 896 aa11.37□□□□□ -0.59
NEK1-202ENST00000505119 FHDC1Q9C0D6 1143 aaPredicted RBP11.37□□□□□ -0.59
NEK1-202ENST00000505119 WASLO00401 505 aaPredicted RBP11.36□□□□□ -0.59
NEK1-202ENST00000505119 SCNN1DP51172 638 aa11.36□□□□□ -0.59
NEK1-202ENST00000505119 TAS1R3Q7RTX0 852 aa11.36□□□□□ -0.59
NEK1-202ENST00000505119 DYRK1BQ9Y463 629 aa11.36□□□□□ -0.59
NEK1-202ENST00000505119 CDC14CA4D256 554 aa11.35□□□□□ -0.59
NEK1-202ENST00000505119 A6NJR5 290 aa11.35□□□□□ -0.59
NEK1-202ENST00000505119 STAU1O95793 577 aaKnown RBP11.35□□□□□ -0.59
NEK1-202ENST00000505119 HDGFL1Q5TGJ6 251 aa11.35□□□□□ -0.59
NEK1-202ENST00000505119 ZSCAN10Q96SZ4 725 aaPredicted RBP11.35□□□□□ -0.59
NEK1-202ENST00000505119 USP17L5A8MUK1 530 aa11.34□□□□□ -0.59
NEK1-202ENST00000505119 GTF2E1P29083 439 aaPredicted RBP11.34□□□□□ -0.59
NEK1-202ENST00000505119 GDF10P55107 478 aa11.34□□□□□ -0.59
NEK1-202ENST00000505119 NCOA4Q13772 614 aa11.34□□□□□ -0.59
NEK1-202ENST00000505119 SV2AQ7L0J3 742 aa11.34□□□□□ -0.59
NEK1-202ENST00000505119 GPR161Q8N6U8 529 aaKnown RBP11.34□□□□□ -0.59
NEK1-202ENST00000505119 NOD1Q9Y239 953 aa11.34□□□□□ -0.59
NEK1-202ENST00000505119 INHAP05111 366 aa11.33□□□□□ -0.6
NEK1-202ENST00000505119 TLR1Q15399 786 aa11.33□□□□□ -0.6
NEK1-202ENST00000505119 GNASQ5JWF2 1037 aa11.33□□□□□ -0.6
NEK1-202ENST00000505119 VWA5B2Q8N398 1253 aa11.33□□□□□ -0.6
NEK1-202ENST00000505119 UCN2Q96RP3 112 aa11.33□□□□□ -0.6
NEK1-202ENST00000505119 STK17AQ9UEE5 414 aa11.33□□□□□ -0.6
NEK1-202ENST00000505119 TMEM214Q6NUQ4 689 aaKnown RBP11.32□□□□□ -0.6
NEK1-202ENST00000505119 ZSCAN1Q8NBB4 408 aa11.32□□□□□ -0.6
NEK1-202ENST00000505119 GLMNQ92990 594 aa11.32□□□□□ -0.6
NEK1-202ENST00000505119 GMCL1Q96IK5 515 aa11.32□□□□□ -0.6
NEK1-202ENST00000505119 TIMMDC1Q9NPL8 285 aa11.32□□□□□ -0.6
NEK1-202ENST00000505119 CUEDC1Q9NWM3 386 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms